Query= MSMg01no531_e17.b1 MSMg01no531_e17.b1 CHROMAT_FILE:
MSMg01no531_e17.b1 PHD_FILE: MSMg01no531_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:52 2005
(455 letters)
>mm_chr11_111607515_111608369
Length = 855
Score = 712 bits (368), Expect = 0.0
Identities = 400/418 (95%), Gaps = 13/418 (3%)
Strand = Plus / Minus
Query: 1 tcgagtctcttgtctgtggtcagtctgtggggtgaggagggtgggttctgatgcagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tcgagtctcttgtctgtggtcagtctgtggggtgaggagggtgggttctgatgcagagag 346
Query: 61 aggacggagggcatcgcatgtacatgctccttgaacttcatttgtttgttgtacagcctt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct: 345 aggacggagggcatcgcatgtacatactccttgaacttcatttgtttgttgcactgcctt 286
Query: 121 cgtcctgtggtattcactggtctgcccttgactctagtccaaatacatagttatgtgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cgtcctgtggtattcactggtctgcccttgactctagtccaaatacatagttatgtgtca 226
Query: 181 gatgcaaaaacaaaaatgtacttattttttctcttgtagatatgaatgatttacctacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gatgcaaaaacaaaaatgtacttattttttctcttgtagatatgaatgatttacctacat 166
Query: 241 atgcatatgcgtgtgcgtgcgcgagcacgtgcgcatgcgcgcgcgtacctggtacttgta 300
||||||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 165 atgcatatgcgtgtg------------cgtgcgcatgcgcgcgcgcacctggttcttgta 118
Query: 301 aaggctggaagaggatgtctgatcctctggaactggagttacaggtggctacgagccacc 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 117 aaggctggaagaggatgtctgatcctctggaactggag-tacaggtggctacgagccacc 59
Query: 361 ctgtaagtgctgggaactgatcctgggttttggaggaacaacaatatgaactaaccag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ctgtaagtgctgggaactgatcctgggttttggaggaacaacaatatgaactaaccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_e17.g1 MSMg01no531_e17.g1 CHROMAT_FILE:
MSMg01no531_e17.g1 PHD_FILE: MSMg01no531_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:53 2005
(574 letters)
>mm_chr11_111452554_111453527
Length = 974
Score = 965 bits (499), Expect = 0.0
Identities = 536/559 (95%), Gaps = 18/559 (3%)
Strand = Plus / Plus
Query: 1 aaggttagtagagtggctttcccatcacacaaggcattgatgttacctgtcttcgacatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 aaggttagtagagtggctttcccatcacacaaggcattgatgttacctgtcttcgacagt 260
Query: 61 ggaaattacagaacagatatggtctatatagactatttttgcgcgtccttatttattctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaattacagaacagatatggtctatatagactatttttgcgcgtccttatttattctt 320
Query: 121 aaaacttaatgaaattggtagtgagtccagcgccttgcatctcatggctttggctgtcaa 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaacttaatgaaattggtaatgagtccagcgccttgcatctcatggctttggctgtcaa 380
Query: 181 tttaaattcaagacttttcctctttaggtcctttctttaaacaacaacatagtcatgtgg 240
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tttaaattcaagacttttcctctttagatcctttctttaaacaacaacatagt------- 433
Query: 241 gcatgtgggagagctttctgcagttttgtagactatagatgatggaggctgatggaggaa 300
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 434 -catgtgggagagctttctgcagttttgtagactataga----------tgatggaggaa 482
Query: 301 aagaacattgaaaccatcctggtgatgtcatcacagcttttgactatttcacatggcacg 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aggaacattgaaaccatcctggtgatgtcatcacagcttttgactatttcacatggcacg 542
Query: 361 caggtggaagaaaacatgaaaatattcgtaatataaatgatcagcttaaggttgatacac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 543 caggtggaagaaaacatgaaaatattcgtaatataaatgatcagcttaaggttgatgcac 602
Query: 421 tacattaggcataaaaagtcatggagaaatttgagtttaggtctgcatgcccagaaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tacattaggcataaaaagtcatggagaaatttgagtttaggtctgcatgcccagaaggtg 662
Query: 481 acaatgtaagatttgtgttgcatagaatgtccttcctacctaattataaatatataatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acaatgtaagatttgtgttgcatagaatgtccttcctacctaattataaatatataatac 722
Query: 541 atacatatatgtactaatt 559
|||||||||||||||||||
Sbjct: 723 atacatatatgtactaatt 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
