Query= MSMg01no531_k13.b1 MSMg01no531_k13.b1 CHROMAT_FILE:
MSMg01no531_k13.b1 PHD_FILE: MSMg01no531_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:21 2005
(533 letters)
>mm_chr11_114857090_114858021
Length = 932
Score = 977 bits (505), Expect = 0.0
Identities = 526/533 (98%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 1 acagtaagaccctatttagaaaaaaaaaagtataactctgtttatataacaattagacac 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 201 acagtaagaccctatttagaaaaaaaaa-gtataactctgtttatataacaatcagacac 259
Query: 61 aggaaagctaagcaatacacccttggccagcccatgagcatacatgtggcaaagacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggaaagctaagcaatacacccttggccagcccatgagcatacatgtggcaaagacttaa 319
Query: 121 acttagtgggtatgaaatgctaggttcaggttgtcaccaaggtggctgggaagcagggat 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 320 acttagtgggtatgaaatgctaggttcaggttgtcaccaaggtgactgggaagcagggat 379
Query: 181 gtgccatcagacagagagatcaccagtatagcccaccttctatgactgaatctagaggtc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 380 gtgccatcagacagagagatcaccagtatagcccaccttctgtgactgaatctggaggtc 439
Query: 241 acagtgtcatgagtatttctcatggaagggctacatatttactgtacaagctgtcaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagtgtcatgagtatttctcatggaagggctacatatttactgtacaagctgtcaaatt 499
Query: 301 gccttctcaatatttacctctatacctttaattggcactgccctcggttggaaatacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gccttctcaatatttacctctatacctttaattggcactgccctcggttggaaatacttc 559
Query: 361 cttctgctgtggtgtaagtgaccatccagttctcagccctatataacaccctcatcccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cttctgctgtggtgtaagtgaccatccagttctcagccctatataacaccctcatcccac 619
Query: 421 cctaaggcagggagggagaagaaagaattccagagccagagttagaggaggagagtgccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 620 tctaaggcagggagggagaagaaagaattccagagccagagttagaggaggaaagtgccc 679
Query: 481 tgaatgctgtgttctgtgtgtggccttgtctctcaatcatgagctcacggcag 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgaatgctgtgttctgtgtgtggccttgtctctcaatcatgagctcacggcag 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_k13.g1 MSMg01no531_k13.g1 CHROMAT_FILE:
MSMg01no531_k13.g1 PHD_FILE: MSMg01no531_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:21 2005
(676 letters)
>mm_chr11_114981032_114982107
Length = 1076
Score = 803 bits (415), Expect = 0.0
Identities = 439/447 (98%)
Strand = Plus / Minus
Query: 230 tatgtatgtatgtatgtatgtatgtatgtatatatatatatgagcccaccgtagctctcc 289
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1068 tatgtatgtatgtatgtatgtatgtatgtatgtatatatatgagcccactgtagctctct 1009
Query: 290 tcgacacaccagaagagggcatcagatcccattacagctggttgtgagccaccatgtggt 349
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1008 ttgacacaccagaagagggcatcagattccattacagctggttgtgagccaccatgtggt 949
Query: 350 tgctgggaattgaactcaggacctctggaagagcagccagtgctcttaaccactgagcca 409
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 948 tgctgggaattgaactcaggacctctggaagagcagtcagtgctcttaaccactgagcca 889
Query: 410 tctctccagccctcgctctacaggcacacagcctttgaaggtgttcagagcgagggtccc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tctctccagccctcgctctacaggcacacagcctttgaaggtgttcagagcgagggtccc 829
Query: 470 ctggctgaaaaccagagttctgaaggtcataaggtatttggctgtcccctgctatctaag 529
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 828 ctggctgaaaaccagagttctgaaggtcataaggtgtttggctgtcccctgctatctaag 769
Query: 530 gtggctgggttgggctcagaggagggaggcttaggcctgggttacacatgtccccctgcc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gtggctgggttgggctcagaggagggaggcttaggcctgggttacacatgtccccctgcc 709
Query: 590 cttccaggcatggcggtggtgacagtggcggtggtgaagatggcgtctgtgatgggtttc 649
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 708 cttccaggcatggcggtggtgacagtggcggtggtgaagatggcgtcggtgatgggtttc 649
Query: 650 tggatctcagtgtgctcctcccagtca 676
|||||||||||||||||||||||||||
Sbjct: 648 tggatctcagtgtgctcctcccagtca 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
