Query= MSMg01no532_a09.b1 MSMg01no532_a09.b1 CHROMAT_FILE:
MSMg01no532_a09.b1 PHD_FILE: MSMg01no532_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:50 2005
(590 letters)
>mm_chr11_105669201_105670190
Length = 990
Score = 1009 bits (522), Expect = 0.0
Identities = 552/576 (95%), Gaps = 22/576 (3%)
Strand = Plus / Plus
Query: 15 gaattctaggctgttttctctaccccttttttgcttcttcttcgtttttttcatttataa 74
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 215 gaattctaggctgttttctctaccccttttttgcttcttcttcttttttttcatttataa 274
Query: 75 taaggcgatatataatactggtagcaaaagtggcttgtaaagctttctaggcaaccaacc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taaggcgatatataatactggtagcaaaagtggcttgtaaagctttctaggcaaccaacc 334
Query: 135 atgttctctgtcttagttggatttccattgcaccatgaccaaaggcagcttgaggaggag 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atgttctctgtcttagttggatttccattgcaccatgaccaaaggcagcttgaggaggag 394
Query: 195 aggtttgacttcatcttacaactctcaggtcacacacttcattactaagcaaagtcagaa 254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aggtttgacttcatcttacaactctcaggtcacacacttcattactaagcaaagtcagag 454
Query: 255 caggaaccatggaagaaagctgcttgctttgttcatcatggcttgctcagtttattttct 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caggaaccatggaagaaagctgcttgctttgttcatcatggcttgctcagtttattttct 514
Query: 315 tatgcaccacccaaggccacctgctcaggggtcacacacacacacacacacacacacaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tatgcaccacccaaggccacctgctcaggggtcacacacacacacacacacacacaca-- 572
Query: 375 cacacacacacacacacaaaatgggttgggtcctcccatatcaattattaatcaagaaaa 434
||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 --------------------atgggttgggtcctcccatatcaattattaatcaagaaaa 612
Query: 435 tactcgaaggtttgactctaggcaatctaatgagggaattttctcagttgaggtttctct 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tactcgaaggtttgactctaggcaatctaatgagggaattttctcagttgaggtttctct 672
Query: 495 tcccaaagtaatctagcttctgtcaagctgacaagaaactaactatatcaatcagcttct 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tcccaaagtaatctagcttctgtcaagctgacaagaaactaactatatcaatcagcttct 732
Query: 555 gtaaatctcacatgtaatagaatttctcacatgata 590
||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtaaatctcacatgtaatagaatttctcacatgata 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_a09.g1 MSMg01no532_a09.g1 CHROMAT_FILE:
MSMg01no532_a09.g1 PHD_FILE: MSMg01no532_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:50 2005
(493 letters)
>mm_chr11_105816957_105817849
Length = 893
Score = 580 bits (300), Expect = e-170
Identities = 320/334 (95%), Gaps = 12/334 (3%)
Strand = Plus / Minus
Query: 160 ttgctttgttttgacattctcttgtcttattggtcttttccttgttttgatttttgttta 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 ttgctttgttttgacattctcttgtcttattggtcttttccttgttttgatttttgttta 834
Query: 220 catggagtgtgtgtgtgtgttgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtcttgagag 279
||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 833 catggagtgtgtgtgtg------------tgtgtgtgtgtgtgtgtgtgtatcttgagag 786
Query: 280 gaagaacataaagttgggtggagaggatctgggaggaattaggggaggagaaaacacaaa 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gaagaacataaagttgggtggagaggatctgggaggaattaggggaggagaaaacacaaa 726
Query: 340 agatattgtatgaaaaaatgttctttaataaagaaatccgcaggggagaaataattagat 399
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 725 agatattgtatgaaaaaatgttcttcaataaagaaatccgcaggggagaaataattagat 666
Query: 400 ttcgtaatgttggggcgcgtggagaagaaaagccttggcaagcactgctctttcccgtga 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttcgtaatgttggggcgcgtggagaagaaaagccttggcaagcactgctctttcccgtga 606
Query: 460 tgtttcccgtgactctgctaccctgctcatgcct 493
||||||||||||||||||||||||||||||||||
Sbjct: 605 tgtttcccgtgactctgctaccctgctcatgcct 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
