Query= MSMg01no532_d21.b1 MSMg01no532_d21.b1 CHROMAT_FILE:
MSMg01no532_d21.b1 PHD_FILE: MSMg01no532_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(624 letters)
>mm_chr11_115050466_115051487
Length = 1022
Score = 1031 bits (533), Expect = 0.0
Identities = 599/626 (95%), Gaps = 12/626 (1%)
Strand = Plus / Minus
Query: 5 gaattccatacattct-tccacacaaaaattaaatatttaaaagaaaacaaagacctat- 62
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattccatacatt-tgtacacacaaaaattaaatatttaaaagaaaacaaagacctata 725
Query: 63 --aagaagatggctgctttcctcagaaccctgaccaccacctgattaacacccccctgtc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agaagaagagggctgctttcctcagaaccctgaccaccacctgattaacacccccctgtc 665
Query: 121 gccaccagcacccatctttctcatctctcttccttcacaattaggataaaaacaaaatca 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 664 gccaccagcacccatctttctcatctctcttccttcacaattaagataaaaacaaaatca 605
Query: 181 cagtgcttgtttatggcaaagtgcaaagaccccagataaaataaagcacacagaagatgg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 604 cagtgcttgtttatggcaaagtgcaaagaccccag-----ataaagcacacagaagatgg 550
Query: 241 gaaggagaaaagggggaggtgtgtgaagcggagctcctgaggcacgcaggcctaactgtc 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 549 gaaggagaaaagggggaggtgtgtgaagcggagctcctgaggcacacaggcctaactgtc 490
Query: 301 caggcggctgtggcatcacaaggtggcccgagtggatgattacatggtgaaggcacaagg 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 489 caggcggctgtggcatcacaaggtggcctgagtggatgattacatggtgaaggcacaagg 430
Query: 361 aatggggacataaggtactttctttctaaaacgtggtcacagcaataactcacttcctcg 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 429 aatggggacataaggtactttctttctaaaacacagtcacagcaataactcacttcctcg 370
Query: 421 tctccaagtctgtagtgagtgtcagaaaaagcaggaactgtggcaacgtgtagggacagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tctccaagtctgtagtgagtgtcagaaaaagcaggaactgtggcaacgtgtagggacagt 310
Query: 481 gcagacatcttcttgctgacaggggagactaagaactatcacatgattgcatggacaggg 540
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 309 gcagacatcttcttgctgacaggggattctaagaactatcacatgattgcatggacaggg 250
Query: 541 tcaccatccactccagcactttccctggtgagctgcancggtgaagtgtg--tgtgtgtg 598
| ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct: 249 taaccatccactccagcactttccctggtgagctgcagcggtgaagtgtgcatgcgtgtg 190
Query: 599 tgtgtgtgtgtgtgtgtgtgtgtgtg 624
||||||| ||||||||||| ||||||
Sbjct: 189 tgtgtgtctgtgtgtgtgtctgtgtg 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1022
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1012
Effective search space: 621368
Effective search space used: 621368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_d21.g1 MSMg01no532_d21.g1 CHROMAT_FILE:
MSMg01no532_d21.g1 PHD_FILE: MSMg01no532_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(570 letters)
>mm_chr11_114857539_114858508
Length = 970
Score = 1056 bits (546), Expect = 0.0
Identities = 564/570 (98%)
Strand = Plus / Plus
Query: 1 cagagccagagttagaggaggagagtgccctgaatgctgtgttctgtgtgtggccttgtc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagccagagttagaggaggaaagtgccctgaatgctgtgttctgtgtgtggccttgtc 260
Query: 61 tctcaatcatgagctcacggcagctgtggttaccacacaagaccaagtcagcaaaatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcaatcatgagctcacggcagctgtggttaccacacaagaccaagtcagcaaaatcag 320
Query: 121 ttagctaattatgtatatggctgttccatctgaatggacacctgcatgccagaagagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagctaattatgtatatggctgttccatctgaatggacacctgcatgccagaagagggc 380
Query: 181 atcagagctctttacagatggttgtgagttaccttgtggttactgggaatctaactcagg 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 atcagagctctttacagatggttgtgagtcaccttgtggttactgggaatctaactcagg 440
Query: 241 acctctaaaagagtagccagtactcttaatctttgagccatctatctagactgaagtcat 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 acctctaaaagagtagccagtactcttaacctttgagccatctatctagactgaagtcat 500
Query: 301 ttaaatatataggtatttatttggtaaattcatttatgtgtttgatacaccacagagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaatatataggtatttatttggtaaattcatttatgtgtttgatacaccacagagaat 560
Query: 361 cttctaaaagtctcagagcattctcaagaaatatgtatttactggctgtcctcagccacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttctaaaagtctcagagcattctcaagaaatatgtatttactggctgtcctcagccacc 620
Query: 421 agaggagctgtgtttagggacagggccttgatgtcaacagacttcactggttctcataac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaggagctgtgtttagggacagggccttgatgtcaacagacttcactggttctcataac 680
Query: 481 agggctgagtgctgcttcccccagagcacttctgaggcctgttcacccagaggacagcac 540
||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 agggccgagagctgcttcccccagagcacctctgaggcctgttcacccagaggacagcac 740
Query: 541 caagcatgctcaggaacaggaacaacttca 570
||||||||||||||||||||||||||||||
Sbjct: 741 caagcatgctcaggaacaggaacaacttca 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
