Query= MSMg01no532_g08.b1 MSMg01no532_g08.b1 CHROMAT_FILE:
MSMg01no532_g08.b1 PHD_FILE: MSMg01no532_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:18 2005
(629 letters)
>mm_chr11_92326784_92327812
Length = 1029
Score = 1178 bits (609), Expect = 0.0
Identities = 624/629 (99%)
Strand = Plus / Plus
Query: 1 agatggagatatggagcagagagaagtacatttgacatgttaaagagatcatgtcaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatggagatatggagcagagagaagtacatttgacatgttaaagagatcatgtcaacaa 260
Query: 61 tgggggaagtcccaaactgagattcctgggtctcttggatcacataatgtcaggtttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggggaagtcccaaactgagattcctgggtctcttggatcacataatgtcaggtttaaa 320
Query: 121 ggacatctcatggagttgttactcaaagtgtttgtgtcctctttatagtttcagatgagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ggacatctcatggagttgttactcaaagtgtttgtgtcctctttatagtttcagatgaag 380
Query: 181 gaattgcactccttccccagtctgatttcgctgatgcattacttggattgattttatcaa 240
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gagttgcactccttccccagtctgatttcgctgatacattacttggattgattttatcaa 440
Query: 241 taagattttaaaagccaatatgtttcttcagttccattttaccctgataatttatgagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taagattttaaaagccaatatgtttcttcagttccattttaccctgataatttatgagat 500
Query: 301 gtctctctttgtacttttcatagaggttactaatacccatgtcacacatagctggcactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctctctttgtacttttcatagaggttactaatacccatgtcacacatagctggcactc 560
Query: 361 aacacatggtgtaggattatcctccatccttaaaatgtagtcagatacaacttggaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacacatggtgtaggattatcctccatccttaaaatgtagtcagatacaacttggaagat 620
Query: 421 ggagtctgctggagcaaggggcagtagccactatttatttccgtagagcaaacagaaact 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 ggagtctgctggagcaaggggcagtagccactatttatttctgtagagcaaacagaaact 680
Query: 481 gaacttaaaagtaatggactaagagacaaagtttggagctgtgacaaaaggatggaccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaacttaaaagtaatggactaagagacaaagtttggagctgtgacaaaaggatggaccac 740
Query: 541 ctagagactgccatatccagggatccatcccataatcagcttccaaacactgacacaatt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 ctagagactgccatatccagggatccatcccataatcagcttccaaacactgacaccatt 800
Query: 601 gcatacactagcaagattttgctgaaagg 629
|||||||||||||||||||||||||||||
Sbjct: 801 gcatacactagcaagattttgctgaaagg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_g08.g1 MSMg01no532_g08.g1 CHROMAT_FILE:
MSMg01no532_g08.g1 PHD_FILE: MSMg01no532_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:18 2005
(588 letters)
>mm_chr11_92398471_92399456
Length = 986
Score = 872 bits (451), Expect = 0.0
Identities = 467/473 (98%), Gaps = 2/473 (0%)
Strand = Plus / Minus
Query: 116 aacagagaataggcacggggaagaaaaactgcaagagccaaaggtagtggatcattccaa 175
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 986 aacagggaataggcacggggaagaaaaactgcaagagccaaatgtagtggatcattccaa 927
Query: 176 ccagaaagtatctgtaagacacatgataagagataatgcatatgaatttacagagactgt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ccagaaagtatctgtaagacacatgataagagataatgcatatgaatttacagagactgt 867
Query: 236 gacaatattcataagacatacacagattcaaaacagataaagttccagaatagagaagag 295
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gataatattcataagacatacacagattcaaaacagataaagttccagaatagagaagag 807
Query: 296 aaagtggacacaaggttccacagtcaggttagaagagaagcaaaattatatcttaacagt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aaagtggacacaaggttccacagtcaggttagaagagaagcaaaattatatcttaacagt 747
Query: 356 catggggcagggtatggaactgttgaagaactaacgataaaataatatcagagagaggga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 catggggcagggtatggaactgttgaagaactaacgataaaataatatcagagagaggga 687
Query: 416 ggcaatattagaggctctgaggtataactgacaggggcttcagttgtagaagggacaaag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ggcaatattagaggctctgaggtataactgacaggggcttcagttgtagaagggacaaag 627
Query: 476 cagaataaacaagagaacacagttatagagacatggaagacctggtatacaaagagcact 535
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cagaataaacaagaga--acagttatagagacatggaagacctggtatacaaagagcact 569
Query: 536 tctgtgtaacaaaccttcctttaagactcatagaacacactcatgtgacaaag 588
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tctgtgaaacaaaccttcctttaagactcatagaacacactcatgtgacaaag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 986
Length adjustment: 10
Effective length of query: 578
Effective length of database: 976
Effective search space: 564128
Effective search space used: 564128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
