NGGGGGGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTG
TTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGTCTCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCATAAACTTTGG
AGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAACAAGCCAT
TGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGT
TCTTTGATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATC
GATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGT
TGAAAATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAAATGAAG
ACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAAACACCC
TTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATTAAAGGGTGGAC
CATGTAGAGACTGCCTTATCCAGGGATCCACCCCATAATCAGCATCCAAA
CGCTGACACCATTGCATACACTAGCAAGATTTTATCGAA

CGTGTTTTACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAAGAAATCACCATG
TCTGAGAAAATGAGAAAAATAATTCAAATTTATATGGGAGGTATATGTGC
ATTTTATGCAGAGGAAGTAAAAAAATATGCCTTATTCTATTATGAATAAA
AAGACTTGTCATAAATTTAAACTAGTTCTTTATGCTTAATAAAGCTTTCA
CACAAGCACCTGAAAAGAAACCAGAGAGAAAATGTACCCATTAAAGTATT
TACCCTTCAAGTAACCTAAAATGGTAAGAAATATAAGCTTAATTATCTAT
TCCAAGCTTGGCCACTACACGAGTTTCAGTACTATTATAGTTGGAAAACG
TAGAATATATTCAACAGCAAATTTAAATCTACAGACTTTAAAATACCTTC
CTTTGGGCTGCAAGTGATAATCGAGAACCCTACATCACCATGAGCCTTAG
TACATTAACATGATATAAAATATATGTTAAAGATAGATTCCTGATTTATA
ATAATTGCAACTCTCAGAAACTAATAGCCAGAAGCATTTGACTTCTCCCT
TGTGACATTCTCACTCAAACCCAGATAAAATACCATCCAAGTCAGCAAAA
GAGCTTTTATCATCAAGATAGTAGCAACAATCATCATGTTTTAAAGAACT
TTAAAATTGTGGGAAAAATGAATAGCTTAGTGTATTATCTTCCTTGGGA

Query= MSMg01no532_g23.g1 MSMg01no532_g23.g1 CHROMAT_FILE:
MSMg01no532_g23.g1 PHD_FILE: MSMg01no532_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:21 2005
         (581 letters)



>mm_chr11_40194657_40195636
          Length = 980

 Score = 1108 bits (573), Expect = 0.0
 Identities = 579/581 (99%), Gaps = 1/581 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaagaaatcaccatgtctgagaaaatgagaaaaataattcaaatttatatgggaggtat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaagaaatcaccatgtctgagaaaatgagaaaaataattcaaatttatatgggaggtat 260

                                                                       
Query: 61  atgtgcattttatgcagaggaagtaaaaaaatatgccttattctattatgaataaaaaga 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 atgtgcattttatgcagaggaagtaaaaaa-tatgccttattctattatgaataaaaaga 319

                                                                       
Query: 121 cttgtcataaatttaaactagttctttatgcttaataaagctttcacacaagcacctgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttgtcataaatttaaactagttctttatgcttaataaagctttcacacaagcacctgaa 379

                                                                       
Query: 181 aagaaaccagagagaaaatgtacccattaaagtatttacccttcaagtaacctaaaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagaaaccagagagaaaatgtacccattaaagtatttacccttcaagtaacctaaaatgg 439

                                                                       
Query: 241 taagaaatataagcttaattatctattccaagcttggccactacacgagtttcagtacta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taagaaatataagcttaattatctattccaagcttggccactacacgagtttcagtacta 499

                                                                       
Query: 301 ttatagttggaaaacgtagaatatattcaacagcaaatttaaatctacagactttaaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttatagttggaaaacgtagaatatattcaacagcaaatttaaatctacagactttaaaat 559

                                                                       
Query: 361 accttcctttgggctgcaagtgataatcgagaaccctacatcaccatgagccttagtaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accttcctttgggctgcaagtgataatcgagaaccctacatcaccatgagccttagtaca 619

                                                                       
Query: 421 ttaacatgatataaaatatatgttaaagatagattcctgatttataataattgcaactct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaacatgatataaaatatatgttaaagatagattcctgatttataataattgcaactct 679

                                                                       
Query: 481 cagaaactaatagccagaagcatttgacttctcccttgtgacattctcactcaaacccag 540
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cagaaactaataaccagaagcatttgacttctcccttgtgacattctcactcaaacccag 739

                                                    
Query: 541 ataaaataccatccaagtcagcaaaagagcttttatcatca 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ataaaataccatccaagtcagcaaaagagcttttatcatca 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space:   553870
Effective search space used:   553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)