Query= MSMg01no532_n15.b1 MSMg01no532_n15.b1 CHROMAT_FILE:
MSMg01no532_n15.b1 PHD_FILE: MSMg01no532_n15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:53 2005
(691 letters)
>mm_chr11_67619221_67620311
Length = 1091
Score = 1259 bits (651), Expect = 0.0
Identities = 678/687 (98%), Gaps = 1/687 (0%)
Strand = Plus / Plus
Query: 5 gaattctcatcattttcatcgatagttcttacttatgctggaactattaacattttgctt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatcatttttatcgatagttcttacttatgctggaactattaacattttgctt 264
Query: 65 tagctttggcagtttaatattttattttagtaactaacatttttcaagatagttgtctta 124
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 tagctttggcagttttatattttattttagtaactgacatttttcaagatagttgtctta 324
Query: 125 gatagggcttttattgttatgaagagacaccacgaccaaggcaactcttataaaggcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gatagggcttttattgttatgaagagacaccacgaccaaggcaactcttataaaggcaga 384
Query: 185 catttaattggggctggcttgcagtttcagaggttcagttcattatcatcatagcaggaa 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catttaattggggctggcttacagtttcagaggttcagttcattatcatcatagcaggaa 444
Query: 245 gcatgcagcatgcaggccaacatggtactggacaaggagatgagagttctgcatcttgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcatgcagcatgcaggccaacatggtactggacaaggagatgagagttctgcatcttgat 504
Query: 305 tcaaaggcaaccaggagagactggcttccagggagctaggaggagggtctcaaaacgcat 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 505 tcaaaggcaaccaggagagactggcttccagggagctaggaggagg-tctcaaaatgcat 563
Query: 365 ccccacagtgacacacttcctccaaataggccacacctcctaatagtgccacttcagatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccccacagtgacacacttcctccaaataggccacacctcctaatagtgccacttcagatc 623
Query: 425 cccataatagtcttcacttttcttcacatttctgattaaagtgtgtgagtcattccccat 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 cccataatagtcttcacttttcttcacatttctgattaaagtgtgtgagtcattccgcat 683
Query: 485 agactttagaatcactctgtcactttctaagacctactggggtcttcgcttcctgcatca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agactttagaatcactctgtcactttctaagacctactggggtcttcgcttcctgcatca 743
Query: 545 aattgacacagagaataagtaatatcttttaaatgttttgtcactaacattcatcccaga 604
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 744 aattgacacagagaataagtaatatcttttaaatgttctgtcactaacattcatcccaga 803
Query: 605 tgtctccttttctcttctatttttatccttaatttttaatgctgtatatggggaggtgca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tgtctccttttctcttctatttttatccttaatttttaatgctgtatatggggaggtgca 863
Query: 665 cacgtgagtgtaggtgtcccgggcagt 691
||| |||||||||||||||||||||||
Sbjct: 864 cacatgagtgtaggtgtcccgggcagt 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_n15.g1 MSMg01no532_n15.g1 CHROMAT_FILE:
MSMg01no532_n15.g1 PHD_FILE: MSMg01no532_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:53 2005
(642 letters)
>mm_chr11_67695581_67696622
Length = 1042
Score = 1172 bits (606), Expect = 0.0
Identities = 633/642 (98%)
Strand = Plus / Minus
Query: 1 attctttattggttcctctctagtaccagctaccttgttgggtctttagacacattttgc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 attctttattggtccctctctagtaccagctaccttgttgggtctttagacacattttgc 982
Query: 61 tactttttaaaaaccttgtgtccaagaatggccacttcaaagatgaaggatcaatgagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tactttttaaaaaccttgtgtccaagaatggccacttcaaagatgaaggatcaatgagac 922
Query: 121 caccagagatcaacttgctcatacttacacaggtggtgactggagaaacctgagtttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 caccagagatcaacttgctcatacttacacaggtggtgactggagaaacctgagtttgca 862
Query: 181 cccagattggtctacctgatgcacccaccatgtggttaggctgtgcttaagacccagttg 240
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 861 cccagattggtctacctgatgcacccaccatgtagttaggctgtgcttcagacccagttg 802
Query: 241 ggatgagtgtccccttagagctgggtgagaatgctatagctgtatcataagtactaaact 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 801 ggatgagtgtccccttagagctgggtgagaatgctatagctgtatcgtaagtcctaaact 742
Query: 301 gtaaagggtggtgaaccacgacttcatgatgctccacatgtctgttcaatagcttgtcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtaaagggtggtgaaccacgacttcatgatgctccacatgtctgttcaatagcttgtcac 682
Query: 361 agtgcagccttgtgtagatatcttcagggctggcacaatgtctgtggggtgattttgctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgcagccttgtgtagatatcttcagggctggcacaatgtctgtggggtgattttgctc 622
Query: 421 tctgaattagtaatctgatactttgttgatattcctatagagcatagtgcacagtaaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgaattagtaatctgatactttgttgatattcctatagagcatagtgcacagtaaggt 562
Query: 481 tctctggtttcctgacttggtcagtttgaactgcttgtctggaatgtagaggtagaccag 540
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 561 tctctggtttcctgacttggtcagcttgaaatgcttgtctggaatgtagaggtagaccag 502
Query: 541 aagtctccccagaataccccatttatatgctccttaaccggtaagttagggagagaggag 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aagtctccccagaataccccatttatatgctccttaactggtaagttagggagagaggag 442
Query: 601 ctgtgtcagccagaacctgtcttacaggataaggaagtacta 642
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ctgtgtcagccagaacctgtcttacaggaaaaggaagtacta 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
