TTTTCCCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTACTAGTATGCTGACACAGCCACAGCTCCAGGGCTTGGG
AGCTCTTCAGAGCTAGTAAAAAGAGAGACCTCACAAAACCTAAATTCAAA
CCATCAATCAAAATGAGAACCCTATTACACACTACAGTTCCATAAACATT
GTTTTAGTTTTGATACTTAATTTTACTTACTATTTGTCTCATGACTATTC
AATTTCTCTTGAAAATATTAAGGACAGTCTAACCAATTCATTAATCATCT
CCTTTCTCCTTCTTTTCTTCCTCTTTCCTTTCTTTACTTTCTTGGAATTC
TCTGGATTCTTTATTAACCTAATATTTTGCTTTTGTTAAGTATTACATTT
GCCTTCAGGTAAGTTCAATTCTGTGGACTGAAATATAATATGTAGGTACA
TATAGTATGTAGGTACATTTGAAACTCATTTTGTTTTTGTCCAGGTCAGA
AGAGCTCAGGTAAGAGTGAGATACCCTGTCCCAAAAGGACATGTACCATA
TGTATTCACTTACAAGTAGTTATTAACCATAAAATGCAGGATGTCCATGC
TACATTCCACAGAGTCAGGGAGGCTAGACAGGAAGGAGGACACAAGGAAG
GATGCTTGAACCTTGAATGGGGAATAAATGGTAGTACAAAGCAGATGGAG
GGAGGGACTGGTTAGGAGGGAACATCTCGACGTGTTTTTCCCTTCCTTTC
CCGTCCGCTTTGTGGTTTTTGCCCCCTTTTCCCTTCCCCTTTGC

NNNNNCCCAATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACT
CTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGG
AGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACT
GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGTAATGGATAC
AGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCAT
CTTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTACTCAC
TGATAAGTGGATATTAGCCCCCAACCTAGGATACCCCAGATATAAGATAT
TATTTTGCTAACACCTGAAACTCCAGAAGAAATGAGACTGAAGTGTGGAC
ACTATGCCCCTCCCTAGATTTGGGACAAAAAACCCATGGA

Query= MSMg01no536_i21.b1 MSMg01no536_i21.b1 CHROMAT_FILE:
MSMg01no536_i21.b1 PHD_FILE: MSMg01no536_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:42 2005
         (451 letters)



>mm_chr11_7815990_7816840
          Length = 851

 Score =  833 bits (431), Expect = 0.0
 Identities = 443/447 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctactagtatgctgacacagccacagctccagggcttgggagctcttcagagct 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctactagtatggtgacacagccacagctccagggcttgggagctcttcagagct 264

                                                                       
Query: 65  agtaaaaagagagacctcacaaaacctaaattcaaaccatcaatcaaaatgagaacccta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtaaaaagagagacctcacaaaacctaaattcaaaccatcaatcaaaatgagaacccta 324

                                                                       
Query: 125 ttacacactacagttccataaacattgttttagttttgatacttaattttacttactatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttacacactacagttccataaacattgttttagttttgatacttaattttacttactatt 384

                                                                       
Query: 185 tgtctcatgactattcaatttctcttgaaaatattaaggacagtctaaccaattcattaa 244
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtctcacgactattcaatttctcttgaaaatattaaggacagtctaaccaattcattaa 444

                                                                       
Query: 245 tcatctcctttctccttcttttcttcctctttcctttctttactttcttggaattctctg 304
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 tcatctcctttctccttcttttcttcctctttcctttttttactttcttggaattctctg 504

                                                                       
Query: 305 gattctttattaacctaatattttgcttttgttaagtattacatttgccttcaggtaagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gattctttattaacctaatattttgcttttgttaagtattacatttgccttcaggtaagt 564

                                                                       
Query: 365 tcaattctgtggactgaaatataatatgtaggtacatatagtatgtaggtacatttgaaa 424
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcaattctgtggactaaaatataatatgtaggtacatatagtatgtaggtacatttgaaa 624

                                      
Query: 425 ctcattttgtttttgtccaggtcagaa 451
           |||||||||||||||||||||||||||
Sbjct: 625 ctcattttgtttttgtccaggtcagaa 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)