NGGGTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTAAATTTTCCAAGACTTTTTATCATGAAGGGTTGTTGAA
TTTTGTCAAATGCTTTCTTGGCATCTAATGAGATGATCATGTGTTTATTT
TTTCTTTGAGTATGTAAATATAGTGGATTATGATGATAGATTTTCCTATA
TTGAACTATCCCTACATTTCTGGAATGAAGCCTACTTGATTGTGATGAAT
TCATGATGTGTGAATTTTGATGTGTTCATGGATTCGGTTTGCAAGAATTT
TATTAAATATTTTTTGCATGATTATCCATAATGGAAATTGTTCTGAAATT
GTCTTTGTTTGTTGAGTCTTTGTGAGGTTTGGGTTTGAGTGTAATTTTGG
TTTGATAAAATGAATTGGGTAGTGTTCCTTCTGTTTCTATTTTGTGCAAT
AGTTTGAAGAGTATTGCTATTAGGTCTTCGTTGAAGATCTGATAGAATTC
TGCACTAAACCCATCTGATCCTGGGCTTTTGTTTGTTTGGGAGACTATTA
ATGACTGCTTCTATTTCTTTAGGGTTTATTGGACTGCATATTGGATGGTT
TATCTGATCCTGATTTAACTTTTGTAACTGGTATCGTCTACAAAATTATC
CATATCCCCCAGATTTTTCAGTTTTGTTGAATATAGGCTTTTGTAGTAGG
ATCTAATGATTTTAAAAAAATCTCCTCAGTTTCTGTTGTTATATCT

GGGGGCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATAGAATCATCATTAATA
ACTAAGAAATCATCTAGTTGTCCATGTAGCATCATTACAGGACAGTAGTA
CCTTTTTGTTGTTCTGCAGAGATCTAGTCAAAAATGTGGGCTAATCAATC
TAGTGATTATTATTTTTATCTAATAATAAGAGGAAAAGCATATTAAATAG
CCAAAATCTTTCTTAAAAATGTAATTTTCTCAACCTTGCTTAGAGAAGCA
AATCTGTCAATAATTTTAACAGTCCATGGTAGAACCACCTGAGAAAGAGC
ACTTGCTAGTTTTTAATTTCTTCTCGATGGCTCTTGGCAAGTCTTTGTGT
CAAGGCTCATTTGGATGAAGGCTTCCCCATGGTGATCTTTGTTGAAATAG
CTCTCTTACAGGATCTTAGCTTGTTCATTTTTCTTTATTTGGGGTGGATG
TGGAAATATAATTTACTTGAGGTGAATCAGGGGTTGTAAAATTTTGAGGT
AGGGCATGAGAATATACATAAAGGGAAGGTCATTGGAGGAATGCTAAGGC
TATTGGGATGACTCATTAGCATGAAAAGGCCAGGTGCTGTGTAAAATGAC
TGATGGATTGTAGTTACCTCAGTTGAGTATTGTGCTTACATGCTCTAGAG
TAGGCACAGAGGCTGGAAGGGAGAANGCCCATACTCATAAT

Query= MSMg01no537_c03.g1 MSMg01no537_c03.g1 CHROMAT_FILE:
MSMg01no537_c03.g1 PHD_FILE: MSMg01no537_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:26 2005
         (617 letters)



>mm_chr11_27687611_27688627
          Length = 1017

 Score =  832 bits (430), Expect = 0.0
 Identities = 472/486 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttatagaatcatcattaataactaagaaatcatctagttgtccatgtagcatcattacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatagaatcatcattaataactaagaaatcatctagttgtccatgtagcatcattacag 260

                                                                       
Query: 61  gacagtagtacctttttgttgttctgcagagatctagtcaaaaatgtgggctaatcaatc 120
           |||||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 261 gacagtagtacctcattgttgttctgcagagatctggtcaaaaatgtgagctaatcaatc 320

                                                                       
Query: 121 tagtgattattatttttatctaataataagaggaaaagcatattaaatagccaaaatctt 180
           |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tagtgattgttatttttatctaataataagaggaaaagcatattaaatagccagaatctt 380

                                                                       
Query: 181 tcttaaaaatgtaattttctcaaccttgcttagagaagcaaatctgtcaataattttaac 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaaaaatgtaattttctcaatcttgcttagagaagcaaatctgtcaataattttaac 440

                                                                       
Query: 241 agtccatggtagaaccacctgagaaagagcacttgctagtttttaatttcttctcgatgg 300
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 441 agtccatggtagaaccacctgaggaagagcacttgctagtttttaatttcttcttgatgg 500

                                                                       
Query: 301 ctcttggcaagtctttgtgtcaaggctcatttggatgaaggcttccccatggtgatcttt 360
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 ttcttggcaagtctttgtgtcaaggctcatttgggtgaaggcttccccatggtgatcttt 560

                                                                       
Query: 361 gttgaaatagctctcttacaggatcttagcttgttcatttttctttatttggggtggatg 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 gttgaaatagctctcttacaggatcttagcttgttcatatttctttatttggggtggatg 620

                                                                       
Query: 421 tggaaatataatttacttgaggtgaatcaggggttgtaaaattttgaggtagggcatgag 480
           |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 621 tggaaatataatttacttgaggtgaatcaggggttgtataattttggggtagggcatgag 680

                 
Query: 481 aatata 486
           ||||||
Sbjct: 681 aatata 686


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)