Query= MSMg01no537_m01.b1 MSMg01no537_m01.b1 CHROMAT_FILE:
MSMg01no537_m01.b1 PHD_FILE: MSMg01no537_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:12 2005
(179 letters)
>mm_chr11_74279132_74279709
Length = 578
Score = 339 bits (175), Expect = 8e-98
Identities = 178/179 (99%), Gaps = 1/179 (0%)
Strand = Plus / Minus
Query: 1 ctgagactccacccaccctaaaaggaagtgtgtctcccaagtgccaagccccagtgcctg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 ctgagactccacccaccctaaaaggaagtgtgtctcccaagtgccaag-cccagtgcctg 320
Query: 61 ctctgcccgctgaagacagagggctcccttggcacccaggtgctctgctttctagaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctctgcccgctgaagacagagggctcccttggcacccaggtgctctgctttctagaggtg 260
Query: 121 tttgacttgcgctgcctgccagctccaggagatggcgctctgtagatttcaccgtgtgc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttgacttgcgctgcctgccagctccaggagatggcgctctgtagatttcaccgtgtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 578
Length adjustment: 8
Effective length of query: 171
Effective length of database: 570
Effective search space: 97470
Effective search space used: 97470
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no537_m01.g1 MSMg01no537_m01.g1 CHROMAT_FILE:
MSMg01no537_m01.g1 PHD_FILE: MSMg01no537_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:12 2005
(303 letters)
>mm_chr11_74143305_74144007
Length = 703
Score = 578 bits (299), Expect = e-169
Identities = 302/303 (99%)
Strand = Plus / Plus
Query: 1 ctacagggtttgttttcctagtacatgttggttatcaggcaaatgtctttgaggaaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacagggtttgttttcctagtacatgttggttatcaggcaaatgtctttgaggaaaagt 260
Query: 61 ctctctgggatgacatctctcatcttacacagtttgttgtcttttatgggtgaccaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctgggatgacatctctcatcttacacagtttgttgtcttttatgggtgaccaagct 320
Query: 121 tatatttaattgtgatgggatagttgtattcaattgagataaaagttagactacacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatttaattgtgatgggatagttgtattcaattgagataaaagttagactacacacaa 380
Query: 181 aaatatgcactaaatacatcaaaaacttggcttgaagggaaaacaggaactactaaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatatgcactaaatacatcaaaaacttggcttgaagggaaaacaggaactactaaaaga 440
Query: 241 taccactgatggatacaatgttgatacaatgtttaactggaaaagtccttttattatgag 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 taccactgatggatacaatgttgatacaacgtttaactggaaaagtccttttattatgag 500
Query: 301 att 303
|||
Sbjct: 501 att 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
