XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAAC
GTATTATGGCAGGGGCAGAGGAAAGAGAGGGGGGAGCTGCTATTAAAGAG
TTCAGTTTCTGTTCTCTAAGATGAGAATATTTTGGGGATTGGCCATTAAT
CCCGAGTGTTCGCTAACACTTTAAAAGGTGGCTACTATGCAATATATGCT
CTGACTTTTAAGATACCAGCTCTCTCAAGGAATGAAGGGAATCTGTGTTG
TGATACGTGAGGAAGTCGTTCCTATACCAGTCTGATGATGTGGCAGAAAG
CTCATTTTTTACTGTTAACAAATCCTGGTCTTCCTGTAGCAGTTTCAGCT
TCACCATCTTTGATCTACAGAACCAGACAGGGCTGTTTCTGATGTTCCAG
CAGCCCACAGAATCCTCCTTCTTTATTAGGGTGTATTGAAAATTTATAAA
TTATTTCCATTTTTAACCTCATTAATTTTTTTAATGCTATAACATTTCAC
AGATACTGCCCAGAAGTGTAATTAAGGGGCATTATGAAAAGATGAAAGCA
ATCCCTGTTACAGAGGCTCACATCAAAAGAGGCTGTCCCTGAAGCTGCAA
AATGAAAGTGTCTGTGGAGAGGACCCAGGACCCAGAGATATCAAGATGGC
TACAAAACTGCTAGGACCTGGGAGGTGGAGGTGTCTGTGCTTTCAAAACC
TTGCCTGGTTCATCCACTTGAGAATAATTCTCTCCCTCGCCCAAGTCCTC
CTCCTGCTCCATCATTTAG

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCCCCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGC
GGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCT
CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAG
AACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATATGGTACATC
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC
ATTCACAAAGGAATTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCAAAACCTAGGATACCCAAGATATTAGATACAATTTCCTAAACACATG
AGACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAG
AAGTGGGAACAAAACACCTT

Query= MSMg01no538_c24.b1 MSMg01no538_c24.b1 CHROMAT_FILE:
MSMg01no538_c24.b1 PHD_FILE: MSMg01no538_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:47 2005
         (590 letters)



>mm_chr11_11867793_11868782
          Length = 990

 Score = 1102 bits (570), Expect = 0.0
 Identities = 582/586 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaacgtattatggcaggggcagaggaaagagaggggggagctgctattaaaga 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaacgtagaatggcaggggcagaggaaagagaggggggagctgctattaaaga 264

                                                                       
Query: 65  gttcagtttctgttctctaagatgagaatattttggggattggccattaatcccgagtgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttcagtttctgttctctaagatgagaatattttggggattggccattaatcccgagtgt 324

                                                                       
Query: 125 tcgctaacactttaaaaggtggctactatgcaatatatgctctgacttttaagataccag 184
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 tcgctaacactttaaaaggtggctactatgcaacatatgctctgacttttaagataccag 384

                                                                       
Query: 185 ctctctcaaggaatgaagggaatctgtgttgtgatacgtgaggaagtcgttcctatacca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctctctcaaggaatgaagggaatctgtgttgtgatacgtgaggaagtcgttcctatacca 444

                                                                       
Query: 245 gtctgatgatgtggcagaaagctcattttttactgttaacaaatcctggtcttcctgtag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtctgatgatgtggcagaaagctcattttttactgttaacaaatcctggtcttcctgtag 504

                                                                       
Query: 305 cagtttcagcttcaccatctttgatctacagaaccagacagggctgtttctgatgttcca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagtttcagcttcaccatctttgatctacagaaccagacagggctgtttctgatgttcca 564

                                                                       
Query: 365 gcagcccacagaatcctccttctttattagggtgtattgaaaatttataaattatttcca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcagcccacagaatcctccttctttattagggtgtattgaaaatttataaattatttcca 624

                                                                       
Query: 425 tttttaacctcattaatttttttaatgctataacatttcacagatactgcccagaagtgt 484
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 625 tttttaacctcattaatttttttaatgctataacatttcacagacactgcccagaagtgt 684

                                                                       
Query: 485 aattaaggggcattatgaaaagatgaaagcaatccctgttacagaggctcacatcaaaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aattaaggggcattatgaaaagatgaaagcaatccctgttacagaggctcacatcaaaag 744

                                                         
Query: 545 aggctgtccctgaagctgcaaaatgaaagtgtctgtggagaggacc 590
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aggctgtccctgaagctgcaaaatgaaagtgtctgtggagaggacc 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)