Query= MSMg01no539_o19.b1 MSMg01no539_o19.b1 CHROMAT_FILE:
MSMg01no539_o19.b1 PHD_FILE: MSMg01no539_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:02 2005
(645 letters)
>mm_chr11_62036519_62037562
Length = 1044
Score = 1154 bits (597), Expect = 0.0
Identities = 630/641 (98%), Gaps = 1/641 (0%)
Strand = Plus / Plus
Query: 5 tgtgcaaatgtgcttaagatgggaagtgggctgcctggaccccagaaaacacacacagtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtgcaaatgtgcttaagatgggaagtgggctgcctggaccccagaaaacacacacagtg 264
Query: 65 ttgtagaaagttatgacaagcttaaagaggcaagtaaataaaaaaatataattagtagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtagaaagttatgacaagcttaaagaggcaagtaaataaaaaaatataattagtagag 324
Query: 125 atgccagtggcacctggaagccacagacgaggaaggccaccctagaatcttcattcctat 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 atgccagtggcacctggaagccacagatgaggaaggccaccctagaatcttcattcctat 384
Query: 185 ttcctttcaagtgagccccacagcctggccttctcctgaggacctccacaactgctcagg 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 ttcctttcaagtgagccccacagcctggccttttcctgaggacctccacaactgctcagg 444
Query: 245 gtatcagtcgctgatacgacttaacaaacattgggccagcctcagggctaccacttccct 304
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaacagtcgctgatacgacttaacaaacattgggccagcctcagggctaccacttccct 504
Query: 305 ctcagtctaaagggacaggaaaagttgtgccaagagatacccagtcttgtttgctccaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 505 ctcagtctaaagggacaggaaaagttgtgccaagagatacccagtcttgtttgcttcaca 564
Query: 365 tctgattgtcctgtgccatcctgagtgccagttgccttgggctgtgtacacatgtgcatc 424
|||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 565 tctgattgtcctgtgc-atcctaagtgccagttgccttgggctgtgtacacgtgtgcatc 623
Query: 425 cctgctggctcatgcatgtgcatagtaggcctttcacagctgcccagtgtcttcccactt 484
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 624 cctgctggctcatgcacgtgcatagtaggcctttcacagctgcccagtgtctccccactt 683
Query: 485 gggaattatctccatatcagctggctttggaagcttatcacacaggttctatcctatgaa 544
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gggaattatctccatagcagctggctttggaagcttatcacacaggttctatcctatgaa 743
Query: 545 cctggctctctacatgaatgatgtaagtaccatccgtaggcattccatgagtgggccacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cctggctctctacatgaatgatgtaagtaccatccgtaggcattccatgagtgggccacc 803
Query: 605 tttgcacatgcactttacaggaagggtaaactggttttgaa 645
|||||||||||| ||||||||||||||||||||||||||||
Sbjct: 804 tttgcacatgcaatttacaggaagggtaaactggttttgaa 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1044
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1034
Effective search space: 656590
Effective search space used: 656590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_o19.g1 MSMg01no539_o19.g1 CHROMAT_FILE:
MSMg01no539_o19.g1 PHD_FILE: MSMg01no539_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:03 2005
(652 letters)
>mm_chr11_62201320_62202371
Length = 1052
Score = 1214 bits (628), Expect = 0.0
Identities = 646/652 (99%), Gaps = 1/652 (0%)
Strand = Plus / Minus
Query: 1 agtatttttttctgtcttattaatttgaggggttttcccctccttctttgagacatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agtatttttttctgtcttattaatttgaggggttttcccctccttctttgagacatggtt 607
Query: 61 tccctgtgtggctatggctgtcctggaaatcactccgtagagagtacagagatccacctg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tccctgtgtagctatggctgtcctggaaatcactccgtagagagtacagagatccacctg 547
Query: 121 cctctgcctccctagtgctaagattaaaggtatacaccactgccaggtttaacttgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cctctgcctccctagtgctaagattaaaggtatacaccactgccaggtttaacttgagat 487
Query: 181 tttttggctataaaaaaatagaatatatctacaggtgttaggaatacagttagatacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttttggctataaaaaaatagaatatatctacaggtgttaggaatacagttagatacagc 427
Query: 241 agttcttgatgctaccctaaaattccccaggcaatgttcacactgaatacagacaccttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 426 agttcttgatgctaccctaaaattccccaggcaatgttcacactgaatacaggcaccttt 367
Query: 301 tatttattttttttactttgaattttttttttttttttcggtttttcgagacagggtttc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 366 tatttattttttttactttgaa-tttttttttttttttcggtttttcgagacagggtttc 308
Query: 361 tctgtgtagctctggctgttctggaactcactttgtagaccaggctggcctcgaactcag 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tctgtgtagccctggctgttctggaactcactttgtagaccaggctggcctcgaactcag 248
Query: 421 aaatccgcctgcctctgcctcccgagttctgggattaaggcgtgtgccaccacgcctggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaatccgcctgcctctgcctcccgagttctgggattaaggcgtgtgccaccacgcctggc 188
Query: 481 tttttatttttttatttgtagaaaatatcttatttcatgctaggaggaccttgcctagct 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttttatttttttatttgtagagaatatcttatttcatgctaggaggaccttgcctagct 128
Query: 541 aaatgaaacttgtttttttgactgtgagtatccgttctgaaggaaagaaacccatacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aaatgaaacttgtttttttgactgtgagtatccgttctgaaggaaagaaacccatacaag 68
Query: 601 agccactgggtctattgaaagcacttagagaaagtttccttttgaatgggcc 652
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agccgctgggtctattgaaagcacttagagaaagtttccttttgaatgggcc 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
