GGGAAGTGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGTTAAAGTGCATAGAGTTGGTATTTTTTGGTCACACCT
TCACAAGTAGAAATATGGAGCTCAGATAAAAACATTCATAAATTAACATT
TCTGAAAATAATAAACTATAATAAGATTGCTCATAATAGTTGGTTCTTAT
GTAGTATGGAATAATAGTAATACATATACAATACACATAGAGATGCTTAT
ATATACATATACATATACACGATACAAGAATCATTATTAAATATAATTCT
TGGATAAGCCATTATCTATCTCATTATTAATTGTTTTGTTTTACATCTGG
TATATAAACATTGGTAGTAGCTTATGTTTCTCGTATTGTGTTGAGGGCAG
TCAGCGATCTCAAAGATTTAATTGGAAAAATCTGTCTGATAGAAACAATT
CTGTAAACTCAATAAAAATAAACCATACGTTCAAAATGAAAATAAAATGA
GAATTATCCAAGGCTGATAAAATGTGAATTTCCTGACTACTGTCTTCAAC
TTACTCTATATGAACAACTTTCCTAACATTTGTGTATAGATATGTCTTTT
ATTTGTATCTATTCTGTGTTTATAATTTCTGATTGGACTGGAATATTTGA
AAAATAATGACTTTTATCATGATGTATGCTCACAGATAATTCTTGCTATT
CTTCCAGTTGGTATCATGGAACTTTAGGACATGGAAAGACTATAATTCAT
AAT

NNTTAAATAAAGATGTGGGAGGGAGAGGGNAGNATGTGAGAGGGNNAGNT
GGAGAGCAGTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGAAACCATAGACAAGGGAG
AGAGATTAAATATTCAGGTAATGATGGGATAATGAATGGAAAAGTTTATT
CTAAGAAGACTAAAGGGAAAGGTATTATGCCTTCAAAGCTTCTAAAATGG
AAGTGGCCCCCCAAAACTCTCTTGGAAAAAAAATTTTAAAATGGAAACAA
CCTCCTGGGGAAAAAGGGAAGGGCCCCTTTTGTTTTTTTAAAGGGTTTAT
TGGGGCCTTCTCCCACAAAAAAAAAATTTTCTTTTTTTGTTGGGAAAAAT
TTTTTGTTCCCCCCCCACAAATTTTTAATAAAAACCCGGGGGCCCCCCCC
CNNNAAAATATTTTTGAAAAAAAAAAGTGGTTATATTTTTTTTTATAAAA
AAAAACCCCGCCCCCACAAAAAAATATTAAACAACCCCTCTTTTGGGGGG
GGGTTCTTTTTCTTTTTAATAAAAAAAAAAAAAAAATTTTTGTTACAAAA
ACAATTTTTTGTTAAAAGAACTCCTTTTTTTTTTTTTAAAAAAAANGGGG
GGGGGGGGGAAAAGAAAAAAACCCCCTCTCTTCTTTTTATATAAAAAAAA
ACATTTGGTTTCTTTTTTTTTTTCTTTTTTTTTTTTTTTTATATTAAAAA
AAAAAAAAGAAGGGGGGGGGGGCGCGGGGCGCAAAAAATAAAAAAAAACC
ACTCCCTCCG

Query= MSMg01no544_c01.b1 MSMg01no544_c01.b1 CHROMAT_FILE:
MSMg01no544_c01.b1 PHD_FILE: MSMg01no544_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:41 2005
         (699 letters)



>mm_chr11_91451607_91452704
          Length = 1098

 Score = 1249 bits (646), Expect = 0.0
 Identities = 680/694 (97%), Gaps = 7/694 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattctgttaaagtgcatagagttggtattttttggtcacaccttcacaagtagaaatat 65
           ||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 aattctgttgaagtgaatagagttggtattttttggtcacatcttcacaagtagaaatat 265

                                                                       
Query: 66  ggagctcagataaaaacattcataaattaacatttctgaaaataataaactataataaga 125
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 266 ggagctcagataaaaacattcataaattatcatttctgaaaataataaactataataaga 325

                                                                       
Query: 126 ttgctcataatagttggttcttatgtagtatggaataatagtaatacatatacaatacac 185
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 326 ttgctcataatagttggttcttatgtagtatggaat-atagtaatacatatacaatacac 384

                                                                       
Query: 186 atagagatgcttatatatacatatacatatacacgatacaagaatcattattaaatataa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagagatgcttatatatacatatacatatacacgatacaagaatcattattaaatataa 444

                                                                       
Query: 246 ttcttggataagccattatctatctcattattaattgttttgttttacatctggtatata 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcttggataagccattatctatctcattattaattgttttgttttacatctggtatata 504

                                                                       
Query: 306 aacattggtagtagcttatgtttctcgtattgtgttgagggcagtcagcgatctcaaaga 365
           ||||||||||||||||||    |||  |||||||||||||||||||||||||||||||||
Sbjct: 505 aacattggtagtagctta----tct--tattgtgttgagggcagtcagcgatctcaaaga 558

                                                                       
Query: 366 tttaattggaaaaatctgtctgatagaaacaattctgtaaactcaataaaaataaaccat 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttaattggaaaaatctgtctgatagaaacaattctgtaaactcaataaaaataaaccat 618

                                                                       
Query: 426 acgttcaaaatgaaaataaaatgagaattatccaaggctgataaaatgtgaatttcctga 485
           |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 619 acgttcaaaatgaaaagaaaatgagaattatccaagactgataaaatgtgaatttcctga 678

                                                                       
Query: 486 ctactgtcttcaacttactctatatgaacaactttcctaacatttgtgtatagatatgtc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctactgtcttcaacttactctatatgaacaactttcctaacatttgtgtatagatatgtc 738

                                                                       
Query: 546 ttttatttgtatctattctgtgtttataatttctgattggactggaatatttgaaaaata 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttttatttgtatctattctgtgtttataatttctgattggactggaatatttgaaaaata 798

                                                                       
Query: 606 atgacttttatcatgatgtatgctcacagataattcttgctattcttccagttggtatca 665
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atgacttttatcatgacgtatgctcacagataattcttgctattcttccagttggtatca 858

                                             
Query: 666 tggaactttaggacatggaaagactataattcat 699
           ||||||||||||||||||||||||||||||||||
Sbjct: 859 tggaactttaggacatggaaagactataattcat 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1098
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1088
Effective search space:   749632
Effective search space used:   749632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)