Query= MSMg01no544_i11.b1 MSMg01no544_i11.b1 CHROMAT_FILE:
MSMg01no544_i11.b1 PHD_FILE: MSMg01no544_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:13 2005
(407 letters)
>mm_chr11_75734056_75734862
Length = 807
Score = 721 bits (373), Expect = 0.0
Identities = 398/413 (96%), Gaps = 12/413 (2%)
Strand = Plus / Plus
Query: 7 ggaattctgtagcttttctctatccgacatttgtactgactccatcttgccatctgtctc 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattctgtagcttctctctatccgacatttgtactgactccatcttgccatctgtctc 266
Query: 67 ctccaggttctttgtctctgctgtccctatgaagacatctctggagatgacctcagtgtc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctccaggttctttgtctctgctgtccctatgaagacatctctggagatgacctcagtgtc 326
Query: 127 catggactagcatagtacctgaacataatgagtgttaggcacacacacaaagacccaata 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 catggactagcatagtacctgaacataatgagtgttaggcacacacacaaagacccaata 386
Query: 187 cactgcagcccacaaagcaaggcctggccagtcacctcacctcccatccatccggtcctg 246
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 387 cactgcagcccacaaagcaaggcctggccagtcacgtcacctcccatccatccggtcgtg 446
Query: 247 tgtgtttgtatgcgtgtgtgtgtgtgtgtgtgtgtgtgt------ctgtgcgtgtgtctg 300
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 447 tgtgtttgtatgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgcgtgtgtctg 506
Query: 301 tgtctgtgt------gtctcctcaccccaccccctggcatgcttagacccagttctgaac 354
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgtctgtgtctgtgtgtctcctcaccccaccccctggcatgcttagacccagttctgaac 566
Query: 355 tggtctctcttgtcctgcctctggccacatggcaaggtggttcacaccaacta 407
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggtctctcttgtcctgcctctggccacatggcaaggtggttcacaccaacta 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_i11.g1 MSMg01no544_i11.g1 CHROMAT_FILE:
MSMg01no544_i11.g1 PHD_FILE: MSMg01no544_i11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:13 2005
(493 letters)
>mm_chr11_75913773_75914665
Length = 893
Score = 880 bits (455), Expect = 0.0
Identities = 458/459 (99%)
Strand = Plus / Minus
Query: 35 aagtaattgtaataacacaggtacctcacatttaaggcactttataatttcaaaatcttt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 aagtaattgtaataacacaggtacctcacatttaaggcactttataatttcaaaatcttt 834
Query: 95 acacgctttctttcatttcactttcactatgtgtccctctcgtttacaggtgatgaaagt 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 acacgctttctttcatttcactttcactatgtgtccctctcgtttacaggtgatgaaagt 774
Query: 155 acagctcagagaggctcaccagctcgatcacacagggctataagtttggaagtggagggg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 acagctcagagaggctcaccagctcgatcacacagggctataagtttggaagtggagggg 714
Query: 215 tgggactagcagccaggtctagcagatggaaacttgaattcctttcctagcacctccccc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgggactagcagccaggtctagcagatggaaacttgaattcctttcctagcacctccccc 654
Query: 275 ccatacacacttcatgtcttattaaaaagtgaagaccatagaagtgaagtttatgggcaa 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ccatacacacttcatgtcttattaaaaagtgaagaccatagaagtgaagtttatgggcaa 594
Query: 335 aagtaatcaggaagaactgagagttgctgtgagtctatcccagaaaagtggggctagctg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aagtaatcaggaagaactgagagttgctgtgagtctatcccagaaaagtggggctagctg 534
Query: 395 tagcttgtttaaagctgtggtattattaggtagcacagacaaggggatattgcttctgac 454
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tagcttgtttaaagctgtagtattattaggtagcacagacaaggggatattgcttctgac 474
Query: 455 cccagtgcagttctcagagtgggagcaaggactcagatt 493
|||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cccagtgcagttctcagagtgggagcaaggactcagatt 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|