XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTT
GAGTATTTTTATAGAGATGAAAAGGTAAATAACAGAAGTAGCAAATGAAA
TAGAATAAGCTTAGATATAGAAAGAAATTTATTATTTAAGTTTATAATTG
TAAGTAATTTTAGGTACATCAATAAAATGAATTATGAAAATAAATAAATG
ATAGGAAATCCAATAAAAAGAATATTTCCTATATCAGAGGTTTTGATGAA
TACTTTGCCAAGGATCAGCCACAGCTTGGAGAGGGACTCTGAGGAAGGGG
TGTCCAGGAGTGGCAAAAGGAGGACTTGATATCAAATCATGGCTGTTTGC
TTCTCAAGACAGATTGGTGAAGATCACCAGACAGCTCAACGCTCATAGAT
CAAAGCCCAGACTTTTATTTATATATCAGTTCAATCATTCACCCCAGGAT
CACTTTTTTCCTTCTTTTAAATTAAATATTTTCTTCATTTATACTTCAGA
TGTTATCCCTTTTCTTAGTTTCCCCTCTGACAATCCCCTATCCTCTGCCC
CCTCCACCTGCTCTGCAACCCACCCACTCCCACTTCCTGGCCCTGGCATT
CCCCTATACTGGGGCATAGATCCTTCACAGGACCAAAGGCCTCTCCTTCC
CATGATGACCTACTAAGTAAACCTCTGCTACATACACAGCTAGAGCTATG
AGTCACACCATGTGTTTTCTTTGATTAGTGCTTT

TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTATCTCTGTTCCCCATTTTTAATAGGG
TTATTTGGATCTCTGGAGTCTACCTTCCTGAGTTCTTTGAATATATTGGA
TATTATCCCTCTACCATATGTAGGATTGGTAAAGATCTTTTCCCAATTTG
TTGGTTGCCATTTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAAGCTT
TGCAATTTTATGAGGTCTTTTTTGTTGTTTGTTGATCTTAGAGCATAAGC
CATTGGTGTTNCTGTTCAGGGAGAAATTTCCCCTTGTGGCCCCCCCCTTT
TTTTTTAAGGGGGCTTTTTTTTTCCTCCCCAATTTTTTTTTTTTTTTTTT
TTATTATATTTATATAAAATTCTAATTTTTTTTTTTTTGTTGTTGGTTTN
TTTTNGNNCAATAATAGAAGGGGGGGCCCCTTCTCCCATAAAGGTTTTTT
TTTTTTTTAAGAGAAAAAAAAAAAAAAAAAATAATTTTTCTCCCCCTCTC
TTTTTGGGGGGGGGGGGGGGAGGAACACCCCCCTTTTTTTTTTTTAATAA
AAAAAGGGGTTGTTTTTTCTCTCCCCTTGGTGTGGAGATTTTATTTTTTC
TTTTTTTTTTCTACTAAAAAAAAAAAAAAAAACAAGAGTTGCTGCGGTGG
TGTTTTTGTTTTTTTT

Query= MSMg01no545_b24.b1 MSMg01no545_b24.b1 CHROMAT_FILE:
MSMg01no545_b24.b1 PHD_FILE: MSMg01no545_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:01 2005
         (665 letters)



>mm_chr11_12755753_12756816
          Length = 1064

 Score =  746 bits (386), Expect = 0.0
 Identities = 410/418 (98%), Gaps = 1/418 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgagtatttttatagagatgaaaaggtaaataacagaagtagcaaatgaaat 64
           |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 417 gaattccttgagaatttttatagagatgaaaaagtaaataacagaagtagcaaatgaaat 358

                                                                       
Query: 65  agaataagcttagatatagaaagaaatttattatttaagtttataattgtaagtaatttt 124
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 357 agaataagcttaaatatagaaagaaatttattatttaag-ttataattgtaagtaatttt 299

                                                                       
Query: 125 aggtacatcaataaaatgaattatgaaaataaataaatgataggaaatccaataaaaaga 184
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 298 aggtacatcaataaaatgaattatgaaaataaataaatgataggaaatccgataaaaaga 239

                                                                       
Query: 185 atatttcctatatcagaggttttgatgaatactttgccaaggatcagccacagcttggag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atatttcctatatcagaggttttgatgaatactttgccaaggatcagccacagcttggag 179

                                                                       
Query: 245 agggactctgaggaaggggtgtccaggagtggcaaaaggaggacttgatatcaaatcatg 304
           |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 178 agggactctgaggaaggggtatccaggagtggcaaaaggaggatttgatatcaaatcatg 119

                                                                       
Query: 305 gctgtttgcttctcaagacagattggtgaagatcaccagacagctcaacgctcatagatc 364
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 118 gctgtttgcttctcaagacagattggtgaagatcaccagacagctcaacgctcatagacc 59

                                                                     
Query: 365 aaagcccagacttttatttatatatcagttcaatcattcaccccaggatcactttttt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  aaagcccagacttttatttatatatcagttcaatcattcaccccaggatcactttttt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space:   690370
Effective search space used:   690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)