Query= MSMg01no545_p13.b1 MSMg01no545_p13.b1 CHROMAT_FILE:
MSMg01no545_p13.b1 PHD_FILE: MSMg01no545_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:06 2005
(404 letters)
>mm_chr11_37633870_37634673
Length = 804
Score = 758 bits (392), Expect = 0.0
Identities = 401/404 (99%)
Strand = Plus / Plus
Query: 1 gtcttgagattttcatatttgcagtgtttgtacttcaatccctgacagaccctgaaacag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 gtcttgagattttcatatttgcagtgcttgtacttcaatccctgacagaccctgaaacag 260
Query: 61 atctccagggaccttatagttctatgctcataatgactacacatgtttcacttcatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctccagggaccttatagttctatgctcataatgactacacatgtttcacttcatctca 320
Query: 121 gaccctgaagaaaaatgtctttcccgcacatgttggcaccaaggggtaaaacagttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccctgaagaaaaatgtctttcccgcacatgttggcaccaaggggtaaaacagttattt 380
Query: 181 ccctatggtttcctgaaaggtcagtattctcctgaaaacacttgtccttagagggtgaag 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctatggtttcctgaagggtcagtattctcctgaaaacacttgtccttagagggtgaag 440
Query: 241 aataaatctcttcatatataaaacattttgagctatttagaagggaaaactccacataaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataaatctcttcatatataaaacattttgagctatttagaagggaaaactccacataag 500
Query: 301 tttcagctattattaccattattatctctcactcatttaatatgatctgacatattatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcagctattattaccattattatctctcactcatttaatatgatctgacatattatat 560
Query: 361 tccctttaggcccatggaacctctatcctgaattatggtttata 404
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccctttaggcccatggaacctctatcctgaattatggtttata 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 804
Length adjustment: 9
Effective length of query: 395
Effective length of database: 795
Effective search space: 314025
Effective search space used: 314025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_p13.g1 MSMg01no545_p13.g1 CHROMAT_FILE:
MSMg01no545_p13.g1 PHD_FILE: MSMg01no545_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:06 2005
(527 letters)
>mm_chr11_37732613_37733540
Length = 928
Score = 998 bits (516), Expect = 0.0
Identities = 525/528 (99%), Gaps = 1/528 (0%)
Strand = Plus / Minus
Query: 1 tttatctac-aaatatatacacctacaagaaaattttgtggagccagagccatcagtctg 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tttatctacaaaatatatacacctacaagaaaattttgtggagccagagccatcagtctg 601
Query: 60 attaatttttaatcccaggagaaatcacataaaatcagctacagtacatagagaacaaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 attaatttttaatcccaggagaaatcacataaaatcagctacagtacatagagaacaaaa 541
Query: 120 atctaaagttatgaataatgttttcattagtatttggtgattaagcagtgttgaactctg 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 540 atctaaagttatgaataatgttttcattagtatttgatgattaagcagtgttgaactctg 481
Query: 180 aacttctgcacacaggttgcgatcttgaaacataatttttcagtggattacaacagaatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aacttctgcacacaggttgcgatcttgaaacataatttttcagtggattacaacagaatt 421
Query: 240 tctcatagagttcgttttagacttgaggcagtaaatatactagttgaaatatgagtgtct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctcatagagttcgttttagacttgaggcagtaaatatactagttgaaatatgagtgtct 361
Query: 300 tagcgtgatacacatcagaagagttatcaaacactatttcaagattatgacaaagaacat 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tagtgtgatacacatcagaagagttatcaaacactatttcaagattatgacaaagaacat 301
Query: 360 taaagcacatctgaagaatcttgagcaaatagaagtctgcctgaactgtaatgggacagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taaagcacatctgaagaatcttgagcaaatagaagtctgcctgaactgtaatgggacagt 241
Query: 420 aattccattagatcaaagtacaacaaatgccatttaaacctttattttagaaaaaaatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aattccattagatcaaagtacaacaaatgccatttaaacctttattttagaaaaaaatat 181
Query: 480 attatgtgtatagttaaatatatattatatagtatataggaagaatat 527
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 attatgtgtatagttaaatatatattatatagtatataggaagaatat 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
