Query= MSMg01no546_i14.b1 MSMg01no546_i14.b1 CHROMAT_FILE:
MSMg01no546_i14.b1 PHD_FILE: MSMg01no546_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:52 2005
(444 letters)
>mm_chr11_18652874_18653717
Length = 844
Score = 851 bits (440), Expect = 0.0
Identities = 443/444 (99%)
Strand = Plus / Plus
Query: 1 atcctcatctctcttactcagtgttggtctgcgcagcatccaggttcagaaagctttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcctcatctctcttactcagtgttggtctgcgcagcatccaggttcagaaagctttgtg 260
Query: 61 aaatgtaagaattttccagctgcagtcaagttttctttaaaagttaagaattttgcattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgtaagaattttccagctgcagtcaagttttctttaaaagttaagaattttgcattg 320
Query: 121 ctgactcttgcagctttgaaatataatggagtcaaacagtcaaatttaggattattatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgactcttgcagctttgaaatataatggagtcaaacagtcaaatttaggattattatct 380
Query: 181 caaatgaccagtttctttctgtaaattatcttgtatttatatactatcttcgtatgtaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatgaccagtttctttctgtaaattatcttgtatttatatactatcttcgtatgtaag 440
Query: 241 gagataaatgaaacacagacccacatatgaggcatcaattatcacagacttatggaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagataaatgaaacacagacccacatatgaggcatcaattatcacagacttatggaggaa 500
Query: 301 gcaaaatagctctgttattgcctgagctcaaatataaatatttgcattttaaaccctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaaaatagctctgttattgcctgagctcaaatataaatatttgcattttaaaccctctt 560
Query: 361 ggttgcagtgggtgatgtgagcctgtcatcagagaggaaggggttagaggaggagggggg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttgcagtgggtgaggtgagcctgtcatcagagaggaaggggttagaggaggagggggg 620
Query: 421 tgaagtctgggtgtgtccatggct 444
||||||||||||||||||||||||
Sbjct: 621 tgaagtctgggtgtgtccatggct 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_i14.g1 MSMg01no546_i14.g1 CHROMAT_FILE:
MSMg01no546_i14.g1 PHD_FILE: MSMg01no546_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:52 2005
(424 letters)
>mm_chr11_18809557_18810381
Length = 825
Score = 799 bits (413), Expect = 0.0
Identities = 422/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Minus
Query: 1 ctggggcgggactgcttctctttggagctgtagtgattcaggtaattttaatgatccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctggggcgggactgcttctctttggagctgtagtgattcaggtaattttaatgatccaag 566
Query: 61 gagaatttttctgacaccatttgcataaataaaatgagaattgcatttgtcttctaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagaatttttctgacaccatttgcataaataaaatgagaattgcatttgtcttctaagga 506
Query: 121 tgtatgtaaagcttgctcacaaacaaccatgcaaaaatactcctg-aaaacacaagacaa 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 tgtatgtaaagcttgctcacaaacaaccatgcaaaaatactcctgaaaaacacaagacaa 446
Query: 180 gaaaatcgctgtgacaactctcaattttcaaagtagctaaataggaatggcacaaatact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaaatcgctgtgacaactctcaattttcaaagtagctaaataggaatggcacaaatact 386
Query: 240 aatttttccatctggttctggtcatagcattaggtcagccaataagacaaggcaagaaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatttttccatctggttctggtcatagcattaggtcagccaataagacaaggcaagaaat 326
Query: 300 ggtgtaactcagttctaccgaagagtaagaatagccatatttattaattctcctgaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 ggtgtaactcagttctaccgaagagtaagaatagccatatttattaattctcctgcaaaa 266
Query: 360 gaattgacagaaacttttgtagggactagaatactaagtaaatagtattgtagaaagtgt 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 gaattgacagaaacttttgtagggactagaaaactaagtaaatagtattgtagaaagtgt 206
Query: 420 tatag 424
|||||
Sbjct: 205 tatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
