ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTAGTCATCCTGTCTTGAGTATCATTATCTGCTGAGTCACAGGCTCC
TGCTGTGGGCAGTAATTTCTCATTCCACTAATCACTCACAGGCTATTATT
TAACTGCTAGAGTCCCATAGTGGAGTGACAAGTTCTAATTTTATAGCTGA
AGGACAAAGAAAGTCTACAGAGGAATAATCTCTATGGATTTCATTTTAAA
ACGAAACATCCACGTGGATTATCGCATCACACTTGCGGTAGTTGTTATTA
CCCATAAACCTCTTTAGACATCCAGCTACAGCAACCTGCTGATTGTTTTG
GTTTTCCACTAGCTTTCCGTGAGCTTTGCAACGAAAGTTCTGGCAAAGCA
ACGTGATACCGTTTGACAGAATTGAAGGGGAAGCCATTATTGCTGATGAC
ACTAATGCCACCATTTGCACAATGTCACTTGGGCCAAGCCAGAGATGGGA
TGACTACATTCATTCTGAACTGTGGGTCTACAGTTCCTGACAGGCATTTC
ACGGTCCTGCCTTAGTGTATGTCCTATATTTTAGAGAGGTTGAGAATTTC
TGTAAGTGATGCATGCTGTGCTGTATATAGTACAGGTATCTTTGCTAGAT
GACATCGCAACTTTAACATTTTATTCAATAATTACACCATGACAGTATTA
AAACCCTAGTCAAGACTGACAAACCT

TAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCA
CCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAAT
TCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCT
CCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCT
GGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACAC
ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA
AGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAA
CACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATAT
TAGCCCAAAACCTAAGATACCCAAGATATAAGATACAATTTCCTAAACAC
ATGAAACTCAAGAAAAATGAAGACTGAAGTGTGAACACTATGCCCCT

Query= MSMg01no547_d23.b1 MSMg01no547_d23.b1 CHROMAT_FILE:
MSMg01no547_d23.b1 PHD_FILE: MSMg01no547_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:49 2005
         (684 letters)



>mm_chr11_36559714_36560797
          Length = 1084

 Score = 1263 bits (653), Expect = 0.0
 Identities = 674/681 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccttagtcatcctgtcttgagtatcattatctgctgagtcacaggctcctgctg 63
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttagtcagcttgtcttgagtatcattatctgctgagtcacaggctcctgctg 263

                                                                       
Query: 64  tgggcagtaatttctcattccactaatcactcacaggctattatttaactgctagagtcc 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 tgggcagtaatttctcattccactaatcactcacaggctattatttaactgccagagtcc 323

                                                                       
Query: 124 catagtggagtgacaagttctaattttatagctgaaggacaaagaaagtctacagaggaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catagtggagtgacaagttctaattttatagctgaaggacaaagaaagtctacagaggaa 383

                                                                       
Query: 184 taatctctatggatttcattttaaaacgaaacatccacgtggattatcgcatcacacttg 243
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 taatctctatggatttcattttaaaacgaaacatccacgtggattctcgcatcacacttg 443

                                                                       
Query: 244 cggtagttgttattacccataaacctctttagacatccagctacagcaacctgctgattg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cggtagttgttattacccataaacctctttagacatccagctacagcaacctgctgattg 503

                                                                       
Query: 304 ttttggttttccactagctttccgtgagctttgcaacgaaagttctggcaaagcaacgtg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttggttttccactagctttccgtgagctttgcaacgaaagttctggcaaagcaacgtg 563

                                                                       
Query: 364 ataccgtttgacagaattgaaggggaagccattattgctgatgacactaatgccaccatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ataccgtttgacagaattgaaggggaagccattattgctgatgacactaatgccaccatt 623

                                                                       
Query: 424 tgcacaatgtcacttgggccaagccagagatgggatgactacattcattctgaactgtgg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgcacaatgtcacttgggccaagccagagatgggatgactacattcattctgaactgtgg 683

                                                                       
Query: 484 gtctacagttcctgacaggcatttcacggtcctgccttagtgtatgtcctatattttaga 543
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtctacagttcctgacaggcgtttcacggtcctgccttagtgtatgtcctatattttaga 743

                                                                       
Query: 544 gaggttgagaatttctgtaagtgatgcatgctgtgctgtatatagtacaggtatctttgc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaggttgagaatttctgtaagtgatgcatgctgtgctgtatatagtacaggtatctttgc 803

                                                                       
Query: 604 tagatgacatcgcaactttaacattttattcaataattacaccatgacagtattaaaacc 663
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tagatgacattgcaactttaacattttattcaataattacaccatgacagtattaaaacc 863

                                
Query: 664 ctagtcaagactgacaaacct 684
           | |||||||||||||||||||
Sbjct: 864 ccagtcaagactgacaaacct 884


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)