Query= MSMg01no547_m23.b1 MSMg01no547_m23.b1 CHROMAT_FILE:
MSMg01no547_m23.b1 PHD_FILE: MSMg01no547_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:32 2005
(462 letters)
>mm_chr11_60997281_60998142
Length = 862
Score = 801 bits (414), Expect = 0.0
Identities = 447/458 (97%), Gaps = 2/458 (0%)
Strand = Plus / Plus
Query: 6 gaattccaagaacactgaggctgcagagcccaagactcccatgcatacttctcccatagc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaagaacactgaggctgcagagcccaagactcccatgcatacttctcccatagc 265
Query: 66 accacatggaacctactagatccagagggatctgagaggacactcccttccaactcagca 125
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 266 accacatggaacctactagatccagagggatctgagaggacactcccttacaactcagca 325
Query: 126 aggctgtgccagcaatgtaagtgttctctttgtttcctgttttctaagcaaggctgtgcc 185
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 agactgtgccagcaatgtaagtgttctctttgtttcctgctttctaagcaaggctgtgcc 385
Query: 186 agcaatgtaagtgttctcttcgttttctgttttctattacagagattccactcatatgta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agcaatgtaagtgttctcttcgttttctgttttctattacagagattccactcatatgta 445
Query: 246 agtcagtcctgtgttggttttgctttctcttgtatagtactttgtgggtcttacagcact 305
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 446 agtcagtcctgtgatggttttgctttctcttgtatagtgctttgtgggtcttacagcact 505
Query: 306 cgtttctccgtctggttttccatgaggcattctttacccttcaggcccatctcacaggcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 506 cgtttctccgtctggttttccatgaggcattctttacccttcaggcccatctcacgggcc 565
Query: 366 ctctcc-tctcacatttctatgccttttcgttctctcatcctggtcctttttatttttaa 424
|| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 566 ct-tccctctcacatttctatgccttttcgttatctcatcctggtcctttttatttttaa 624
Query: 425 tttttctttactgtatagttctggctgggactcactga 462
|||||||||||||||||||||||||| | |||||||||
Sbjct: 625 tttttctttactgtatagttctggctagaactcactga 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_m23.g1 MSMg01no547_m23.g1 CHROMAT_FILE:
MSMg01no547_m23.g1 PHD_FILE: MSMg01no547_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:32 2005
(532 letters)
>mm_chr11_61171024_61171955
Length = 932
Score = 990 bits (512), Expect = 0.0
Identities = 527/532 (99%)
Strand = Plus / Minus
Query: 1 caatgccccctgtactggaaacccaaatgtacagtctgggacgggcttaatgttggtatg 60
|||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||||||||
Sbjct: 732 caatgccccctgtactggaaacccaaatgtgcaggctgggacaggcttactgttggtatg 673
Query: 61 aaagtaggatcaacaatagcagtaactgaagaagagtggtcaaacctggagaggagggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aaagtaggatcaacaatagcagtaactgaagaagagtggtcaaacctggagaggagggaa 613
Query: 121 agaacccagaaccctccaaaagttgctggagttcacattcaaatgtgcgtgtctgtctcc 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 612 agaacccagaaccctccaaaagttgctggagttcacattcagatgtgcgtgtctgtctcc 553
Query: 181 actgatacttgttgaaaccttttaaccatttccagagctccagaaggacccctgatctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 actgatacttgttgaaaccttttaaccatttccagagctccagaaggacccctgatctct 493
Query: 241 gatgatacccttcttattcagcctggatgttttttttttcttctgcagcagctgctgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatgatacccttcttattcagcctggatgttttttttttcttctgcagcagctgctgcac 433
Query: 301 caaacaattatcagcaattagctttcaagcatgagcatgttggccacagaagactgctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caaacaattatcagcaattagctttcaagcatgagcatgttggccacagaagactgctca 373
Query: 361 gggataggggtgtgcaccccaataatatgcacaacaaatgtcaattttgtgtatagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gggataggggtgtgcaccccaataatatgcacaacaaatgtcaattttgtgtatagattt 313
Query: 421 atgtctcctccccaagatatcccataatgtctatacaaatattccaacctctcaatattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgtctcctccccaagatatcccataatgtctatacaaatattccaacctctcaatattg 253
Query: 481 tcccaggcaatggtgactggagtcatgttggagtctcagatctgtcacacgg 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcccaggcaatggtgactggagtcatgttggagtctcagatctgtcacacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
