XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGAATAC
AACAACAACAAAAAAATGATCCACCAGAATCATTTTAGCTTCATCCCAGA
GAAGCAGAGACAGTTCAACATATATCAGTCAATAATTATAACTCACCACA
AAATTAGACTCAAGAACAGAAAGTACATGATCTCATTTTATGCAGAGCAA
ACCTTTGATAAAATTCAACATTCATTCCTTCATCATGAAAATCCTAGAGA
TTCTAGGGACACAGGGGACATACCTCAGCATAATAAAAGGAATATGCAAC
AATCCCAATATGAATCAAATGGAGACAAACACAAGGCATTTCATTAAGAT
CAGAAATAGGACAAAGACGTTTATCCACTCTTACTCTATTTTCATTATTA
TATAGATCTTATTACTTTATTCACTCTCATTCAATACAATGCTTGAAATC
CTAGCTAAAGCTCTAAGACATGGGAAGGTAATAAAAAAGGTACAAATGCA
AACGTGAAAATAAAGAGTTAACTACCTGTATTTGCAGACGGCATGATTCT
GTAGACATGAGACTTCAAAGACTACATCATGAAACTTCTAGAGATGATAA
ATACTTTCAGCAAAGTTGCAAGTTACAAAATTAGCAACTAAATCACTAGC
CTTCTTGTAGAGTAAGGGCAAACACTCAGAGAAAGAAACTATGGAAACAA
TTTCACCTACAATAGCTCAAAGAAAACACCTTGGTACACAAACACACCAG
AGGAAGTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXATTAAAGAAGCAGTACTTGAATCAATCCAGTGCTCAAGC
CATTACTGAGCACTACCTGATGGTCCCTGGTGGGCAAGAAGAGTGTGTTG
GAGGCATCAGGCCCATGTAGTTAATCTTAATCTCAACACCAACTTTCCCT
GTGAACTGTGACAACATATGTAAGCCTGGTCTTACTTCGTTAAAAAGAAC
TTTAATGATGCCTACCAAATCATAAATGAGGCACTTACCCTAAAATGCTG
GAACATAGTAAGAGACAAGCAACTGTCATTTATTGTGAGTTAATATTGGC
ACTGTCGTGCACCATTGTTATCATGTTCAGACTTAAATACGCTCAGAAAC
CCTTTGAGCTTGCTAGTGATTTCTTTTTAATATCTCTCTCTCTCCCCCCC
CCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTAAANACCCTACTTGTATGTATGCCTGCCTGACAAAAA
AGGGCATTAGATCCTGTTACAGATGGTTGTAAGCCACCTAATATGTGCTG
GGAATTAACTCAGAACCTCTGGAAAAGCAGCCAGTGCTTTTTACCACTGA
TCCATCTCTCCAGCCCCTTCCTAGTCATTTTTAATTGACTGATTGNGAAA
ACTTTGAATCTTAACATTTATATACAGGCTTAATAGTCTGGTTATAG

Query= MSMg01no547_n04.g1 MSMg01no547_n04.g1 CHROMAT_FILE:
MSMg01no547_n04.g1 PHD_FILE: MSMg01no547_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:33 2005
         (481 letters)



>mm_chr11_17928328_17929208
          Length = 881

 Score =  901 bits (466), Expect = 0.0
 Identities = 475/479 (99%), Gaps = 2/479 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attaaagaagcagtacttgaatcaatccagtgctcaagccattactgagcactacctgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 attaaagaagcagtacttgaatcaatccagtgctcaagccattactgagcactacctgat 512

                                                                       
Query: 61  ggtccctggtgggcaagaagagtgtgttggaggcatcaggcccatgtagttaatcttaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggtccctggtgggcaagaagagtgtgttggaggcatcaggcccatgtagttaatcttaat 452

                                                                       
Query: 121 ctcaacaccaactttccctgtgaactgtgacaacatatgtaagcctggtcttacttcgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcaacaccaactttccctgtgaactgtgacaacatatgtaagcctggtcttacttcgtt 392

                                                                       
Query: 181 aaaaagaactttaatgatgcctaccaaatcataaatgaggcacttaccctaaaatgctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaaaagaactttaatgatgcctaccaaatcataaatgaggcacttaccctaaaatgctgg 332

                                                                       
Query: 241 aacatagtaagagacaagcaactgtcatttattgtgagttaatattggcactgtcgtgca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aacatagtaagagacaagcaactgtcatttattgtgagttaatattggcactgtcgtgca 272

                                                                       
Query: 301 ccattgttatcatgttcagacttaaatacgctcagaaaccctttgagcttgctagtgatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccattgttatcatgttcagacttaaatacgctcagaaaccctttgagcttgctagtgatt 212

                                                                       
Query: 361 tctttttaatatctctctctctccccccccctctctctccctctctctctctctctctct 420
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 211 tctttttaatatctctctctctccccccccctctctctcc--ctctctctctctctctct 154

                                                                      
Query: 421 ctctctctctctctctctctctctctctctctaaanaccctacttgtatgtatgcctgc 479
           ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 153 ctctctctctctctctctctctctctctctctaagtaccctacttgtatgtatgcctgc 95


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 98
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)