BAC Information

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BAC

Clone NameB6Ng01-006O10
Chromosome12 (Build37)
Map Location 94,271,934 - 94,273,049
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006O10.bB6Ng01-006O10.g
ACCDH843630DH843631
length1,1131,221
definitionDH843630|Mus musculus domesticus DNA, BAC clone: B6Ng01-006O10, 5' end.DH843631|Mus musculus domesticus DNA, BAC clone: B6Ng01-006O10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaccttggccttcatgtcaggagcttcctggctccttattacc
tgcagatgcgttcagtttactaactttcctgtccgacatgtctcacctta
cctctggcttctggcaaattacctgtttaatcctgacccttctctgtaac
tatatcttggattcactaatttcttagcttactcatgcttcataggcttt
ctggtctagaccaactttgtgattactttgattcatttctaacacaattg
accatttttactgtttcccaaataatctgcctggattaggggctacctca
tatgtctttaacatagtcttgggttgactgttttcagtctaattttaaca
caacctgtgattaaaaagtagccataatcaaatctgtctgcagaaaaggc
ttaggattgcaaactttgctctagaaaaatctgtgtgtaagaagttccca
aggtaacatttgtaaaatgaggtctacattcataaaggatgtctgcgtgc
attttttccccatgtggatgtattacagatgagttattttaaaatcactt
agaacaattatgaaagaaccagaaatgatgagggaccaagttgtgttaag
taaatgtaggatcatattatatttaaagacaccacaccaacgatcagtga
gtttcagttgagtaggtagaactacatataaagaatctgtataagaaagt
aaattatgggccccgagaatggtttcagataaaatatttggaaccttata
ccaaatcatcccagaagacagcgagaaaagcacgtcatgaagaaatgcac
agggaaaacatgaattgttgcattgacataatttataaattaacatcatc
tttacttcctttctctttgataaggaaaatgggccaggtgaagatttgaa
ggattaatctgaagcctacataattagttgctaagtgagaagactggagc
gtaaaatgtgaggatccaggaatggaggctggaatgatcacaaatgacag
cgagtggaaaattctgtaaaaaaacatctaggcgtggaagaaatttcata
attgtgacatgaagaataatatagcattttattacattttttgtaagagg
atttatttccatc
gaattcaagaaataggacaacaacaaaccaaataacccaattagtaaatg
ggggtatagaactaaacagagaatgcttaacagaggaatctcaaatgtct
gaggggcatttaaaaagatgtccaaagtccttagtcattaatgaaatgca
aaacaaataactatggggttccatctaacacccatcagaatgacaaagat
caaaaactcaagagattgcactgctggcaagattatggagcaagtagaac
actcctctattgctggtagaaatacaaacctgtacaattactttggaaat
caatctggaagtttctcagaaaactgggaataattctccctccagaccct
ggtataccactccagaccatatactcagaagatactccaacatctggtaa
agacacttgatcaattatgttcatagcagctttatttgtaatagccagaa
acaggatacaacaactggatatccctcaactgaagaatagatgttcagga
tcaggtggggtgaaggacaggagagatgactagatgaccatgcaaatgga
tggaaatctgtaactgacgggggcgagggggtgggagtcatctccacgac
aagacagagaactgggataagggaggtgttggaatcagggcctccaaaac
ctgtggtatcacataggcaggacctacagacctgttgccaagacaatggc
caccatattcccagaattcacttgactcacctcccacctttacctgtcat
tatccacataaataaaggggaacatccctccctctctctctcttcccctc
tgctctttctgcttctactttccttgcccccctttctcccaataaagctc
ttatacatggaactcttttggactagtgtgctgtattcagatatgagcta
ttctaacatatcaggggagcccaaaaatcatgcgggtgacctcagttctg
actcactacatgaggatatggaacctgagaggtcactctgtacaggcagg
aaccccagtgttacaatacaacacacccatcaggatattttcaccctaat
tattctgtttacaggtattagggccaggggaggaaaccaagactggaggg
atgggcaacataacaggccacttgcaggacaatctaaccattatgggata
ccggtaggctcagacaggactgcatcctcggagagcacctgacgcgttct
cgacgaaagacgggaagccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94271934_94273049
seq2: B6Ng01-006O10.b_45_1157

seq1  GAATTCTAACCTTGGCCTTCATGTCAGGAGCTTCCTGGCTCCTTATTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACCTTGGCCTTCATGTCAGGAGCTTCCTGGCTCCTTATTACC  50

seq1  TGCAGATGCGTTCAGTTTACTAACTTTCCTGTCCGACATGTCTCACCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGCGTTCAGTTTACTAACTTTCCTGTCCGACATGTCTCACCTTA  100

seq1  CCTCTGGCTTCTGGCAAATTACCTGTTTAATCCTGACCCTTCTCTGTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCTTCTGGCAAATTACCTGTTTAATCCTGACCCTTCTCTGTAAC  150

seq1  TATATCTTGGATTCACTAATTTCTTAGCTTACTCATGCTTCATAGGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTGGATTCACTAATTTCTTAGCTTACTCATGCTTCATAGGCTTT  200

seq1  CTGGTCTAGACCAACTTTGTGATTACTTTGATTCATTTCTAACACAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTAGACCAACTTTGTGATTACTTTGATTCATTTCTAACACAATTG  250

seq1  ACCATTTTTACTGTTTCCCAAATAATCTGCCTGGATTAGGGGCTACCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTTACTGTTTCCCAAATAATCTGCCTGGATTAGGGGCTACCTCA  300

seq1  TATGTCTTTAACATAGTCTTGGGTTGACTGTTTTCAGTCTAATTTTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTAACATAGTCTTGGGTTGACTGTTTTCAGTCTAATTTTAACA  350

seq1  CAACCTGTGATTAAAAAGTAGCCATAATCAAATCTGTCTGCAGAAAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGTGATTAAAAAGTAGCCATAATCAAATCTGTCTGCAGAAAAGGC  400

seq1  TTAGGATTGCAAACTTTGCTCTAGAAAAATCTGTGTGTAAGAAGTTCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATTGCAAACTTTGCTCTAGAAAAATCTGTGTGTAAGAAGTTCCCA  450

seq1  AGGTAACATTTGTAAAATGAGGTCTACATTCATAAAGGATGTCTGCGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACATTTGTAAAATGAGGTCTACATTCATAAAGGATGTCTGCGTGC  500

seq1  ATTTTTTCCCCATGTGGATGTATTACAGATGAGTTATTTTAAAATCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCCCATGTGGATGTATTACAGATGAGTTATTTTAAAATCACTT  550

seq1  AGAACAATTATGAAAGAACCAGAAATGATGAGGGACCAAGTTGTGTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATTATGAAAGAACCAGAAATGATGAGGGACCAAGTTGTGTTAAG  600

seq1  TAAATGTAGGATCATATTATATTTAAAGACACCACACCAACGATCAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTAGGATCATATTATATTTAAAGACACCACACCAACGATCAGTGA  650

seq1  GTTTCAGTTGAGTAGGTAGAACTACATATAAAGAATCTGTATAAGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGTTGAGTAGGTAGAACTACATATAAAGAATCTGTATAAGAAAGT  700

seq1  AAATTATGGGCCCCGAGAATGGTTTCAGATAAAATATTTGGAACCTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGGGCCCCGAGAATGGTTTCAGATAAAATATTTGGAACCTTATA  750

seq1  CCAAATCATCCCAGAAGACAGCGAGAAAAGCACGTCATGAAGAAATGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCATCCCAGAAGACAGCGAGAAAAGCACGTCATGAAGAAATGCAC  800

seq1  AGGGAAAACATGAATTGTTGCATTGACATAATTTATAAATTAACATCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAACATGAATTGTTGCATTGACATAATTTATAAATTAACATCATC  850

seq1  TTTACTTCCTTTCTCTTTGATAAAGGAAAATGGGCCAGGTGAAGATTTGA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTACTTCCTTTCTCTTTGAT-AAGGAAAATGGGCCAGGTGAAGATTTGA  899

seq1  AGGATTAATCTGAAGCCTACATAATTAGTTGCTAAGTGAGAAGACTGGGA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGATTAATCTGAAGCCTACATAATTAGTTGCTAAGTGAGAAGACT-GGA  948

seq1  GCGTAAAATGTGAGGATCCAGGAATGGAGGCTGGAATGATCACAAATGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAAAATGTGAGGATCCAGGAATGGAGGCTGGAATGATCACAAATGAC  998

seq1  AGCGAGTGGAAAATTCTGT-AAAAAACATCTAGGCGTGAAAGAAATTGTA  1049
      ||||||||||||||||||| |||||||||||||||||| |||||||| | 
seq2  AGCGAGTGGAAAATTCTGTAAAAAAACATCTAGGCGTGGAAGAAATT-TC  1047

seq1  ATTAATGTGAGATGAAAGATAATTATAGCAATTTTATATACA--TTTTGT  1097
      || | ||||| |||||  |||| |||||| ||||||| ||||  ||||||
seq2  ATAATTGTGACATGAAGAATAA-TATAGC-ATTTTAT-TACATTTTTTGT  1094

seq1  AAAGAGATTTATTTCCATC  1116
      ||   ||||||||||||||
seq2  AAGAGGATTTATTTCCATC  1113