BAC Information

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BAC

Clone NameB6Ng01-007C08
Chromosome12 (Build37)
Map Location 38,552,927 - 38,553,831
singlet/doubletsinglet
Overlap genenone
Upstream geneMeox2, A530016O06Rik
Downstream geneLOC100043139, Dgkb, LOC668824, LOC100043142, Etv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007C08.bB6Ng01-007C08.g
ACCDH843807DH843808
length770901
definitionDH843807|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C08, 5' end.DH843808|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatgtttccaaaacattttaccatgaaggagtgttgattttt
tttttcaaatggttctcagcatctaaagagatgatcatgtgttttttttt
tccctttgaggtttgtttatatagtggattatgttgatgcattttcatat
attgaaccacccctgcattcctgggatgaagcctatttgatcatggagaa
tgatgcttttaatgtgtttatagtttggtttgcaagaattttattgagta
tatttgcgttgatattcataagggaaattgctctgaagttctttgttgga
tctttgtgtggtttaggtataagtataactgtggcttcatagaacgaatt
gggtagtcttccttctgtttctattttgtggaatagtttgaagataattg
gtattatgtcttctttgaaggtctgatagaattctgcactcaactcatct
tgtcccgggcttttattggttgggagacttttaatgaatgcttctatttc
tttaggggttatgagactgtttagatgggttatctgattctgatttaact
ttggtacctcttatctgtctagaaaattgtctttttcatacagatttttc
agttttcttgagtataagcttttgtagtagggtctcacgatttttttttt
tgaatttcctcagtttctgttgttatgttctcccttttacatatctgatt
tgttgatttggatattgtctctatgccctcagggttagtatagcttaggg
tttatctattattttgattt

gaattctaaatgaagaaaatagctaaaaaaaaattgtttttgaaaaaaaa
tcaaaatacccatttcatgaatttgtaaagacagtgctataaaaaaacaa
caaaaatgaaagaacgaaagaaagaacgaaagaaagaacaaaagaaagaa
cgaaagaacgaaagaacgaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaaggaggaaggaaaggaaggaagagagaaagaaagagaaac
aaagagagaaaagaaaaagaagagaaccttgggagatcaacctgcatgat
gccccttaaacttggtagggtctgtggttaccctggcttcatatggatgg
tttattgaagaaaatgaaatcagcatgccaagaaaagcaggtcttagagg
tattaaaggcacaaatggctcttaagttttttgaactagtaaccctgaag
tccacagttagattaatgaaacaggatggtacaggcatgcctggctaaat
ctcacatcagtggaataaatacctcttgcaaccagtaggattatggaaag
tatgttacaaaggaacaatgagatgatttcttgtttggtgaagataaaac
tttctgttttattattaatgaaatttaaattaaagttaaaagtcacttga
aatatttatgacagctcattagtcttgtgggcattatcatgtttctattt
ttttcctttattttttttatttattacgtattttcctcaatgacatttcc
aatgctatcccaaaagtcccccataccctcccccccacttccctacccac
ccattctcatttttttggccctggcgttcccttgtactgaggcatataaa
gttgtgtgtctgatgggcctctctttccagtgatggcgataagccatctt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_38552927_38553831
seq2: B6Ng01-007C08.g_70_970

seq1  GAATTCTAAATGAAGAAAATAGCTAAAAAAAAATTGTTTTTGAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATGAAGAAAATAGCTAAAAAAAAATTGTTTTTGAAAAAAAA  50

seq1  TCAAAATACCCATTTCATGAATTTGTAAAGACAGTGCTATAAAAAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATACCCATTTCATGAATTTGTAAAGACAGTGCTATAAAAAAACAA  100

seq1  CAAAAATGAAAGAACGAAAGAAAGAACGAAAGAAAGAACAAAAGAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAAAGAACGAAAGAAAGAACGAAAGAAAGAACAAAAGAAAGAA  150

seq1  CGAAAGAACGAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGAACGAAAGAACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200

seq1  AAAGAAAGAAAGGAGGAAGGAAAGGAAGGAAGAGAGAAAGAAAGAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGGAGGAAGGAAAGGAAGGAAGAGAGAAAGAAAGAGAAAC  250

seq1  AAAGAGAGAAAAGAAAAAGAAGAGAACCTTGGGAGATCAACCTGCATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAAAAGAAAAAGAAGAGAACCTTGGGAGATCAACCTGCATGAT  300

seq1  GCCCCTTAAACTTGGTAGGGTCTGTGGTTACCCTGGCTTCATATGGATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTAAACTTGGTAGGGTCTGTGGTTACCCTGGCTTCATATGGATGG  350

seq1  TTTATTGAAGAAAATGAAATCAGCATGCCAAGAAAAGCAGGTCTTAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAAGAAAATGAAATCAGCATGCCAAGAAAAGCAGGTCTTAGAGG  400

seq1  TATTAAAGGCACAAATGGCTCTTAAGTTTTTTGAACTAGTAACCCTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGGCACAAATGGCTCTTAAGTTTTTTGAACTAGTAACCCTGAAG  450

seq1  TCCACAGTTAGATTAATGAAACAGGATGGTACAGGCATGCCTGGCTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTTAGATTAATGAAACAGGATGGTACAGGCATGCCTGGCTAAAT  500

seq1  CTCACATCAGTGGAATAAATACCTCTTGCAACCAGTAGGATTATGGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATCAGTGGAATAAATACCTCTTGCAACCAGTAGGATTATGGAAAG  550

seq1  TATGTTACAAAGGAACAATGAGATGATTTCTTGTTTGGTGAAGATAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTACAAAGGAACAATGAGATGATTTCTTGTTTGGTGAAGATAAAAC  600

seq1  TTTCTGTTTTATTATTAATGAAATTTAAATTAAAGTTAAAAGTCACTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTATTATTAATGAAATTTAAATTAAAGTTAAAAGTCACTTGA  650

seq1  AATATTTATGACAGCTCATTAGTCTTGTGGGCATTATCATGTTTCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTATGACAGCTCATTAGTCTTGTGGGCATTATCATGTTTCTATTT  700

seq1  TTTTCCTTTTATTTTTTTTATTTATTACGTATTTTCCTCAATGACATTTC  750
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCC-TTTATTTTTTTTATTTATTACGTATTTTCCTCAATGACATTTC  749

seq1  CAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTTCCCTACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCCCAAAAGTCCCCCATACCCTCCCCCCCACTTCCCTACCCA  799

seq1  CCCATTCTCATTTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAA  850
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  CCCATTCTCATTTTTTTGGCCCTGGCGTTCCCTTGTACTGAGGCATATAA  849

seq1  AGTTTGTGTGTCTGATGGGCCTCTCTTTCCAGTGATGGCCGATTAGGCCA  900
      || ||||||||||||||||||||||||||||||||||| ||| || ||||
seq2  AG-TTGTGTGTCTGATGGGCCTCTCTTTCCAGTGATGG-CGA-TAAGCCA  896

seq1  TCTTT  905
      |||||
seq2  TCTTT  901


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