BAC Information

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BAC

Clone NameB6Ng01-008I02
Chromosome12 (Build37)
Map Location 102,442,038 - 102,442,978
singlet/doubletsinglet
Overlap genenone
Upstream geneCalm1, Ttc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik
Downstream geneMylf-ps, 4932415G16Rik, Mtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008I02.bB6Ng01-008I02.g
ACCDH844737DH844738
length9391,155
definitionDH844737|Mus musculus domesticus DNA, BAC clone: B6Ng01-008I02, 5' end.DH844738|Mus musculus domesticus DNA, BAC clone: B6Ng01-008I02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaaggtagcaaaatgacacatgatagtgtggaggaggtaac
ttgcagagtttgtgagggaagcagtgcatagttcagtctgacaattcaac
catttcataaaactgggaatttgtgtatatcaaaggtacttgcatatgag
agaaagtaatattgatgtcaaactacgatcactgggaggatatgcaaact
ggtaatgatatccttacacaggcaaattgagaataacgctgaaacaatca
tattatacaaacaatatttagtggaaaggatattttcccccacttcttat
ataaatctaataaactaggtgggatagtgatataccatagctggaatttg
gatcaatatggcaacataaggtgagaaacaatttttccctattctgttat
attctgtggctgatgttcttaatctaataaaggacaggccaacaagggaa
aaaacatggatttcatttgatatcaatattttatggagcaatgaggtctt
tgaggaatctgtgagttcctaaagaagtggttaacccagtaagctagtgt
accatatcaacaaaaaagtaacaagttgggagaagagaagaaaagggggt
ttggggatggctaacagtgcatgagtctattaggaaatatataggattga
aatgatggaagataaacactgttttagtaggtttgagcagactcaatgac
atttctgttttcggtgaaaggaaaagtatagtttcttaagcttgaaataa
tccccatgccaaattggctatgttcagggtagcattttctgatctcttcc
aacagcactgtgtgaatggaatttggtgagagaaaggagtttgttgtctc
tgttacatgttcttgacacaccctgagtaactgcgagcagaacaatgaat
ggcattaataatgaccccagtttctccaagtttgtccca
gaattctaaactgaagaataccgaagggctcagaagcacttgtaaaatgt
tcaacatccttaatcatctgggaaatgcaaattaaaacaaccctgagatt
ccacctcaaaccagtcagaatggtttggatcaaaaattcagatgacagca
gatgctggcgaggatgtggagaaaaaggagcactcttccattgcaagctt
gtacaaccactctggaaatcagtctggtggttcctcagaaaattggacat
agtactaccagaagattacccaggaatacctctcctgggcatatacccag
atgttccaactggtaataaggacacatgctccactatgttcattgcagcc
ctatgtataatagccagaagctggaaagaacccagatgtccctcaacaga
agaatagatacagaaaatgtggtacatttacacaatggagtactactcag
ttattaaaaacaatgaatttatgaaattcttaggcaaatggatgtatctg
gaggatatcatcctgagtgaggtaacccaatcacaaaagaactcacttga
tatgcactcactaagtggtcattagcccagaaacctagaatacccaagat
acaatttgcaaaacacaagaaaatcaagaaggaagaccaatgtgtggata
cttcatttctccccagaatagagaatacaatacccatgtgaggatttaca
gagacaaagtttggagctgagatgaaagaatggaccatccagagactgcc
ccacccagggttccatcatataatcagccaccaaatggagacactattgc
atataccagcaagatttttctgaaaggatcctgatatagctgtttcttgt
gaggctatgccagtgcctggaaaatacagaagtggatgctcacagtcatc
tattggatggaacacaggaccccagtggaagaagtagagaaagagccaag
gagctgaagggtctgtatcctatagtagaacaacaatatgaactaaccag
tacccccagagctcatgtctctagcagcataggtagcagaagatggccta
gtcagcatcaatggaaaaaggccccttgggtttgccacttatatgtccaa
tacagggaaatcggggtcagaatgggaagtgaatggtagagaacatggtc
gtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102442038_102442978
seq2: B6Ng01-008I02.b_45_983

seq1  GAATTCTTTAAAGGTAGCAAAATGACACATGATAGTGTGGAGGAGGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGGTAGCAAAATGACACATGATAGTGTGGAGGAGGTAAC  50

seq1  TTGCAGAGTTTGTGAGGGAAGCAGTGCATAGTTCAGTCTGACAATTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGTTTGTGAGGGAAGCAGTGCATAGTTCAGTCTGACAATTCAAC  100

seq1  CATTTCATAAAACTGGGAATTTGTGTATATCAAAGGTACTTGCATATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATAAAACTGGGAATTTGTGTATATCAAAGGTACTTGCATATGAG  150

seq1  AGAAAGTAATATTGATGTCAAACTACGATCACTGGGAGGATATGCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAATATTGATGTCAAACTACGATCACTGGGAGGATATGCAAACT  200

seq1  GGTAATGATATCCTTACACAGGCAAATTGAGAATAACGCTGAAACAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGATATCCTTACACAGGCAAATTGAGAATAACGCTGAAACAATCA  250

seq1  TATTATACAAACAATATTTAGTGGAAAGGATATTTTCCCCCACTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATACAAACAATATTTAGTGGAAAGGATATTTTCCCCCACTTCTTAT  300

seq1  ATAAATCTAATAAACTAGGTGGGATAGTGATATACCATAGCTGGAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTAATAAACTAGGTGGGATAGTGATATACCATAGCTGGAATTTG  350

seq1  GATCAATATGGCAACATAAGGTGAGAAACAATTTTTCCCTATTCTGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATATGGCAACATAAGGTGAGAAACAATTTTTCCCTATTCTGTTAT  400

seq1  ATTCTGTGGCTGATGTTCTTAATCTAATAAAGGACAGGCCAACAAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGGCTGATGTTCTTAATCTAATAAAGGACAGGCCAACAAGGGAA  450

seq1  AAAACATGGATTTCATTTGATATCAATATTTTATGGAGCAATGAGGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGGATTTCATTTGATATCAATATTTTATGGAGCAATGAGGTCTT  500

seq1  TGAGGAATCTGTGAGTTCCTAAAGAAGTGGTTAACCCAGTAAGCTAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATCTGTGAGTTCCTAAAGAAGTGGTTAACCCAGTAAGCTAGTGT  550

seq1  ACCATATCAACAAAAAAGTAACAAGTTGGGAGAAGAGAAGAAAAGGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCAACAAAAAAGTAACAAGTTGGGAGAAGAGAAGAAAAGGGGGT  600

seq1  TTGGGGATGGCTAACAGTGCATGAGTCTATTAGGAAATATATAGGATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATGGCTAACAGTGCATGAGTCTATTAGGAAATATATAGGATTGA  650

seq1  AATGATGGAAGATAAACACTGTTTTAGTAGGTTTGAGCAGACTCAATGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGGAAGATAAACACTGTTTTAGTAGGTTTGAGCAGACTCAATGAC  700

seq1  ATTTCTGTTTTCGGTGAAAGGAAAAGTATAGTTTCTTAAGCTTGAAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTTTCGGTGAAAGGAAAAGTATAGTTTCTTAAGCTTGAAATAA  750

seq1  TCCCCATGCCAAATTGGCTTATGTTCAGGGTAGCATTTTCTGATCTCTTC  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCCCATGCCAAATTGGC-TATGTTCAGGGTAGCATTTTCTGATCTCTTC  799

seq1  CAACAGCACTGTGTGAATGGAA-TTGGTGAGAGAAAGGAGTTTTGTTGTC  849
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  CAACAGCACTGTGTGAATGGAATTTGGTGAGAGAAAGGAG-TTTGTTGTC  848

seq1  TCTGGTTACATGTTTCTTGACACA-CCTGAGTAACTGCGAGCAGAACAAT  898
      ||| |||||||| ||||||||||| |||||||||||||||||||||||||
seq2  TCT-GTTACATG-TTCTTGACACACCCTGAGTAACTGCGAGCAGAACAAT  896

seq1  GAATGCATTTAATAAATGACCCCAG-TTCTCCAAGTTTGTCCCA  941
      |||||   ||||| ||||||||||| ||||||||||||||||||
seq2  GAATGGCATTAAT-AATGACCCCAGTTTCTCCAAGTTTGTCCCA  939