BAC Information

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BAC

Clone NameB6Ng01-009K07
Chromosome12 (Build37)
Map Location 15,238,827 - 15,239,950
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009K07.bB6Ng01-009K07.g
ACCDH845529DH845530
length1,1771,108
definitionDH845529|Mus musculus domesticus DNA, BAC clone: B6Ng01-009K07, 5' end.DH845530|Mus musculus domesticus DNA, BAC clone: B6Ng01-009K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctccggaatactgaatggctgagaagaacctaataaaata
ttcaaaatcctcaatcattagggaaatgcaaattaaaacaaccctgagat
tccatctcacaccagtcagaatagtaaggtcaaaaattcaggtgatagca
gatgctggtgaggatgtggagaaagaggaacactcttccattgttggtag
gattgcaagcttgtacaaccactctggaaatcagtctggtggtttctcag
aaaattggacatagtactaccagaggatccagcaatacctctcctggaca
tatacccagaagatgttccaactggaaataagaaaacttgctccactatg
ttcatatcagccttatttataatatctagaagctggaaagaacccagatg
tccctcaacagagaaatggatacagaaaatttggtacatatacacaatga
agtactattcagcaattaaaaacaatgaatttgtgaaattgctaggcaaa
tggatggatctagaggatatcatcctgagtgtggtaacccaatcacaaaa
gaatttacatgatatgcactcattgataagtggaaattagcccagaaact
tagaatacccaagatacaatttgcaaaacacatgaaactcaataagaacg
aataccaaagtgtggacactttgccccttcttagaattgggaacaaaaca
cccctggaaggagttacagagacaaagtttggagctgagatgaaagggtg
gaccatctagagactaccccacccagggatccatcccataatcagccacc
aaatgcagacactgttgcatacgccaactagattttgctgaaaggaccct
gatatgctgtctcttgtgagtctctgccaggtgcctggcaaacacagaag
tggatgttcactgtcagctattggatggaacgcagggcctcccaatggag
agctagagaaagaacccaaggagatggacggggtctgcaacctctatagt
ggaacaacatatgtactaaccagtacctcaaagcctctgtcttatagtgc
ttatgtagagaattagggctagttgggcattcattgggaaaagaagccct
ttgggctttacaaattttttttgcccatgttagtgggaagttagggtcaa
taatggaggtggggtgtctgagagagc
gaattcaagacaaaagcttagagtagacaccagcagaggaagtctgatct
gccccatggcccatattttcaacaagattattatttaaaagaaataaagc
tgtgattcacatttggattttccacatagaaactcagtcattttagttat
ataaagtatggtttgatcagtaaaatattttttttcttgggaagaacttg
tcattatcaaggtgaatggtaggaaaacatagttgtttttttgttttttg
tttttttttggtttttggtttttggtttttttgcaatgggctactaatta
aaaagaataatggttctttaacattttagtttaacaaatgaggcagggta
gtaagataacattgattagaaagtagaaagcaggcagttgctgcagttgg
tgatttatgagatcctcttagtgcatacattgaggttatttgctccagaa
ggaaactctagacaaattcataattcataatatttagcaatacatttgtg
atgaagtagctagtgctaacaaggaagcagaacagatactctgaatctca
tgatactgtttttaggatgcttacagtacttttttacttgcattagtaat
gcaaatgcttttcaataaatctcttttcataactacagatgtacgagata
ccctagatataataaaaatattcagcaaaagtaaacagaaggcaagatac
tcgactttctgcaaatggagttccaaaccttaattccatgaagttaaatt
ttcatggtaatataaggtttttattaacatagtttgagtgttatatgaaa
gcgttactaacatgataaatttcaaataaatcatttgtatgtgaatgttg
gtttggcactctacagcatatccttctcaatatgaaggtctaattatgtt
tccaaactgtggagatctttcaatcactaatcacatatataacctgaaca
tgtacacttcatgtatcacatatggggactctcagtactcattttgaatt
ccctcgtatttgacttctgagttactgagcaaaactctaaaacatggttt
attatggagtaggaaaagaaaacatatagaaggctattgatttttggggt
taattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15238827_15239950
seq2: B6Ng01-009K07.g_67_1174

seq1  GAATTCAAGACAAAAGCTTAGAGTAGACACCAGCAGAGGAAGTCTGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACAAAAGCTTAGAGTAGACACCAGCAGAGGAAGTCTGATCT  50

seq1  GCCCCATGGCCCATATTTTCAACAAGATTATTATTTAAAAGAAATAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATGGCCCATATTTTCAACAAGATTATTATTTAAAAGAAATAAAGC  100

seq1  TGTGATTCACATTTGGATTTTCCACATAGAAACTCAGTCATTTTAGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCACATTTGGATTTTCCACATAGAAACTCAGTCATTTTAGTTAT  150

seq1  ATAAAGTATGGTTTGATCAGTAAAATATTTTTTTTCTTGGGAAGAACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATGGTTTGATCAGTAAAATATTTTTTTTCTTGGGAAGAACTTG  200

seq1  TCATTATCAAGGTGAATGGTAGGAAAACATAGTTGTTTTTTTGTTTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCAAGGTGAATGGTAGGAAAACATAGTTGTTTTTTTGTTTTTTG  250

seq1  TTTTTTTTTGGTTTTTGGTTTTTGGTTTTTTTGCAATGGGCTACTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGGTTTTTGGTTTTTGGTTTTTTTGCAATGGGCTACTAATTA  300

seq1  AAAAGAATAATGGTTCTTTAACATTTTAGTTTAACAAATGAGGCAGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATAATGGTTCTTTAACATTTTAGTTTAACAAATGAGGCAGGGTA  350

seq1  GTAAGATAACATTGATTAGAAAGTAGAAAGCAGGCAGTTGCTGCAGTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATAACATTGATTAGAAAGTAGAAAGCAGGCAGTTGCTGCAGTTGG  400

seq1  TGATTTATGAGATCCTCTTAGTGCATACATTGAGGTTATTTGCTCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATGAGATCCTCTTAGTGCATACATTGAGGTTATTTGCTCCAGAA  450

seq1  GGAAACTCTAGACAAATTCATAATTCATAATATTTAGCAATACATTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTCTAGACAAATTCATAATTCATAATATTTAGCAATACATTTGTG  500

seq1  ATGAAGTAGCTAGTGCTAACAAGGAAGCAGAACAGATACTCTGAATCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTAGCTAGTGCTAACAAGGAAGCAGAACAGATACTCTGAATCTCA  550

seq1  TGATACTGTTTTTAGGATGCTTACAGTACTTTTTTACTTGCATTAGTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTGTTTTTAGGATGCTTACAGTACTTTTTTACTTGCATTAGTAAT  600

seq1  GCAAATGCTTTTCAATAAATCTCTTTTCATAACTACAGATGTACGAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCTTTTCAATAAATCTCTTTTCATAACTACAGATGTACGAGATA  650

seq1  CCCTAGATATAATAAAAATATTCAGCAAAAGTAAACAGAAGGCAAGATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGATATAATAAAAATATTCAGCAAAAGTAAACAGAAGGCAAGATAC  700

seq1  TCGACTTTCTGCAAATGGAGTTCCAAACCTTAATTCCATGAAGTTAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTTTCTGCAAATGGAGTTCCAAACCTTAATTCCATGAAGTTAAATT  750

seq1  TTCATGGTAATATAAGGTTTTTATTAACATAGTTTGAGTGTTATATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTAATATAAGGTTTTTATTAACATAGTTTGAGTGTTATATGAAA  800

seq1  GCGTTACTAACATGATAAATTTTCAAAATAGAATCATTTGTATGTGAATG  850
      ||||||||||||||||||||||   ||||| |||||||||||||||||||
seq2  GCGTTACTAACATGATAAATTT--CAAATA-AATCATTTGTATGTGAATG  847

seq1  TTGGTTTGGCACTCTACAGCATAATCCTTCTCAAATATGAAGGTCTAATT  900
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TTGGTTTGGCACTCTACAGCAT-ATCCTTCTC-AATATGAAGGTCTAATT  895

seq1  ATGTTTCCAAACTGTGGAGATCTTTTCAATCACTAATCACATATATAACC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGTTTCCAAACTGTGGAGATC-TTTCAATCACTAATCACATATATAACC  944

seq1  TGAACATGTACACTTCATGTATCACATATGGTGACTCTCAGTTACTCATT  1000
      ||||||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  TGAACATGTACACTTCATGTATCACATATGGGGACTCTCAG-TACTCATT  993

seq1  TTGATTTCACTCAGTATTTGACCTCCTGAGTATCTGATGTAAATACTTAT  1050
      |||| ||| ||| |||||||| || ||||||  |||| | ||| || | |
seq2  TTGAATTCCCTC-GTATTTGA-CTTCTGAGTTACTGA-GCAAA-AC-TCT  1038

seq1  AAACTATGCTATATTATGGAGTTTAGGAAAAGAAAACATATATGAGGGCT  1100
      |||  ||| | ||||||||||  ||||||||||||||||||| || ||||
seq2  AAAACATGGTTTATTATGGAG--TAGGAAAAGAAAACATATA-GAAGGCT  1085

seq1  ATTGATTTTTGTGTGTTAATTTTG  1124
      ||||||||||| | ||||||||||
seq2  ATTGATTTTTG-GGGTTAATTTTG  1108