BAC Information

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BAC

Clone NameB6Ng01-010F12
Chromosome12 (Build37)
Map Location 101,547,822 - 101,616,620
singlet/doubletdoublet
Overlap geneTtc7b
Upstream geneChes1, LOC100039892, 2610021K21Rik, Tdp1, LOC100040041, Kcnk13, Psmc1, BC002230, Calm1
Downstream geneRps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010F12.bB6Ng01-010F12.g
ACCDH846037DH846038
length646655
definitionDH846037|Mus musculus domesticus DNA, BAC clone: B6Ng01-010F12, 5' end.DH846038|Mus musculus domesticus DNA, BAC clone: B6Ng01-010F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,615,975 - 101,616,620)(101,547,822 - 101,548,515)
sequence
gaattcaccagatcagctgccagcttctcactccattagtactggataga
agcaaccatgatataacttagtttatggaaaaatacaaactgggctgaga
aaaattagagttctgacaaatcatttttgatggctgtggaaacctggctt
tattattttttgaaagaagatgaaattaaaaaattactttacgtaataaa
atgtttcttcttaatcgattttatagtcattttccttggataattgagca
agacagaaaccatgacatgttcacctcaccttttcaacacccaagaaaaa
ccctttcatgtgttaattcatggagagccagtgcttgtaagtcatgcaag
ctgaactgtagtgatggatttgcagcctccatctcttaaacccaggccag
aagagtgcagaggctgtagcttgcagctgggctgctagtaaggattcccc
aggagtgagtttgttgctttgctcaatattaacaaaaggagcctcggggc
tcagtgggtaaagtgcttgctatgcaatcttgcagtcctgagtttgattc
ctagcacccacagtgctaaggggccagtcagtctagtcaggactttgagc
cccatggacatggagagaccaggcagtggggaggggaggggagaga
gaattcaggatgcagttggggcagaggacagtaggtaacaggcgcatccc
aatggccagctcccttattttatgggtggggcggggatggtggaggctaa
ttgctaggaaacaagcacaggcattcttcaggatctgtggggggttagct
ccccaataaccaatctgttaaaagcctgataaagatgctatgttttttat
tactacccatgcagctctgtgtacttctttaaatcagaagagaaagggat
ttattcaatgtggcttcattgggaaggggaacaaagagatcaataacttc
tcacccagccctggcccatcttcagggttctgaaggaaggccacgtctat
agcacatactgtacaccaagtgccaaggcaatgctgttgatggctgcatt
ctgaaatattacaatgacaagaaatcagtatgaatcttgagagactattt
ttccccagcaccctatgctggactgctaattgagcacaaacacgtcgtat
tcccaggaggctttgtattttctaaaaaaaacactctactccttctcttc
tgaatgtcgaaaaacagggggtttttacacatttgccttaagtgggcttg
gaaaagctcggtaaactgtttaagggcctattttcttccccccgaaaggg
cccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_101615975_101616620
seq2: B6Ng01-010F12.b_33_678 (reverse)

seq1  TCTCTCCCCTCCCCTCCCCACTGCCTGGTCTCTCCATGTCCATGGGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCTCCCCTCCCCACTGCCTGGTCTCTCCATGTCCATGGGGCTC  50

seq1  AAAGTCCTGACTAGACTGACTGGCCCCTTAGCACTGTGGGTGCTAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTGACTAGACTGACTGGCCCCTTAGCACTGTGGGTGCTAGGAAT  100

seq1  CAAACTCAGGACTGCAAGATTGCATAGCAAGCACTTTACCCACTGAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGGACTGCAAGATTGCATAGCAAGCACTTTACCCACTGAGCCC  150

seq1  CGAGGCTCCTTTTGTTAATATTGAGCAAAGCAACAAACTCACTCCTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTCCTTTTGTTAATATTGAGCAAAGCAACAAACTCACTCCTGGGG  200

seq1  AATCCTTACTAGCAGCCCAGCTGCAAGCTACAGCCTCTGCACTCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTACTAGCAGCCCAGCTGCAAGCTACAGCCTCTGCACTCTTCTGG  250

seq1  CCTGGGTTTAAGAGATGGAGGCTGCAAATCCATCACTACAGTTCAGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTTTAAGAGATGGAGGCTGCAAATCCATCACTACAGTTCAGCTTG  300

seq1  CATGACTTACAAGCACTGGCTCTCCATGAATTAACACATGAAAGGGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTACAAGCACTGGCTCTCCATGAATTAACACATGAAAGGGTTTT  350

seq1  TCTTGGGTGTTGAAAAGGTGAGGTGAACATGTCATGGTTTCTGTCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGTGTTGAAAAGGTGAGGTGAACATGTCATGGTTTCTGTCTTGCT  400

seq1  CAATTATCCAAGGAAAATGACTATAAAATCGATTAAGAAGAAACATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCCAAGGAAAATGACTATAAAATCGATTAAGAAGAAACATTTTA  450

seq1  TTACGTAAAGTAATTTTTTAATTTCATCTTCTTTCAAAAAATAATAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTAAAGTAATTTTTTAATTTCATCTTCTTTCAAAAAATAATAAAGC  500

seq1  CAGGTTTCCACAGCCATCAAAAATGATTTGTCAGAACTCTAATTTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCCACAGCCATCAAAAATGATTTGTCAGAACTCTAATTTTTCTC  550

seq1  AGCCCAGTTTGTATTTTTCCATAAACTAAGTTATATCATGGTTGCTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGTTTGTATTTTTCCATAAACTAAGTTATATCATGGTTGCTTCTA  600

seq1  TCCAGTACTAATGGAGTGAGAAGCTGGCAGCTGATCTGGTGAATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTACTAATGGAGTGAGAAGCTGGCAGCTGATCTGGTGAATTC  646

seq1: chr12_101547822_101548515
seq2: B6Ng01-010F12.g_65_719

seq1  GAATTCAGGATGCAGTTGGGGCAGAGGACAGTAGGTAACAGGCGCATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATGCAGTTGGGGCAGAGGACAGTAGGTAACAGGCGCATCCC  50

seq1  AATGGCCAGCTCCCTTATTTTATGGGTGGGGCGGGGATGGTGGAGGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCAGCTCCCTTATTTTATGGGTGGGGCGGGGATGGTGGAGGCTAA  100

seq1  TTGCTAGGAAACAAGCACAGGCATTCTTCAGGATCTGTGGGGGGTTAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGGAAACAAGCACAGGCATTCTTCAGGATCTGTGGGGGGTTAGCT  150

seq1  CCCCAATAACCAATCTGTTAAAAGCCTGATAAAGATGCTATGTTTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAATAACCAATCTGTTAAAAGCCTGATAAAGATGCTATGTTTTTTAT  200

seq1  TACTACCCATGCAGCTCTGTGTACTTCTTTAAATCAGAAGAGAAAGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCCATGCAGCTCTGTGTACTTCTTTAAATCAGAAGAGAAAGGGAT  250

seq1  TTATTCAATGTGGCTTCATTGGGAAGGGGAACAAAGAGATCAATAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAATGTGGCTTCATTGGGAAGGGGAACAAAGAGATCAATAACTTC  300

seq1  TCACCCAGCCCTGGCCCATCTTCAGGGTTCTGAAGGAAGGCCACGTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGCCCTGGCCCATCTTCAGGGTTCTGAAGGAAGGCCACGTCTAT  350

seq1  AGCACATACTGTACACCAAGTGCCAAGGCAATGCTGTTGATGGCTGCCAT  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGCACATACTGTACACCAAGTGCCAAGGCAATGCTGTTGATGGCTG-CAT  399

seq1  GCTGAAATACTTACAATGACAAGAAAGTCAGTATGAATCTTGAGCAGACA  450
       |||||||| |||||||||||||||| ||||||||||||||||| |||| 
seq2  TCTGAAATA-TTACAATGACAAGAAA-TCAGTATGAATCTTGAG-AGAC-  445

seq1  TATTTTTTCCCCAAGCAGCCCCTATGCTGGGACTGCATAAGTGAGCCACA  500
      |||||||  ||| ||||  ||||||||| ||||||| ||| |||| ||||
seq2  TATTTTT--CCCCAGCA--CCCTATGCT-GGACTGC-TAATTGAG-CACA  488

seq1  GAACAGCGTCTGTATCCCCAGGGCAGGCTTTGCTAATTCTGCTACAACAG  550
       |||| |||| |||| ||||||  |||||||| ||  | | ||| || | 
seq2  -AACA-CGTC-GTATTCCCAGG--AGGCTTTG-TA--TTTTCTA-AAAAA  529

seq1  AACAGCTTCTAGCTC--TCTCCTCCATCCATGAATGTGCGGAAGAGCAGG  598
      ||||   |||| |||  |||| ||      |||||||   ||| | ||||
seq2  AACA--CTCTA-CTCCTTCTCTTC------TGAATGT--CGAAAAACAGG  568

seq1  GGGTATCTCAGCACCACTGTGCCTGTACTGTGTGGCCTGCTAGAGACTCG  648
      |||| | |    ||   | |||||  | ||   ||| ||  | || ||| 
seq2  GGGTTTTT----ACACATTTGCCTTAAGTG---GGCTTGGAAAAG-CTC-  609

seq1  GGTAAACTGTCTCAGGGCCATACTTCCTATCCCCTG-AAGGGCCCAG  694
      |||||||||| | |||||| || || ||  |||| | ||||||||||
seq2  GGTAAACTGTTTAAGGGCC-TATTTTCTTCCCCCCGAAAGGGCCCAG  655