BAC Information

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BAC

Clone NameB6Ng01-010K17
Chromosome12 (Build37)
Map Location 60,832,238 - 60,999,329
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
Downstream geneEG622488, LOC665665, Ppia-ps12_475.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010K17.bB6Ng01-010K17.g
ACCDH846269DH846270
length974972
definitionDH846269|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K17, 5' end.DH846270|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,998,557 - 60,999,329)(60,832,238 - 60,832,734)
sequence
gaattcccttctagaggaaaaatttctcttcgataatctagatgataaag
aaattacaacactatttggtgcactgagtaaattgttagacaaaaggagg
ggaggtgatttcagctttagatcgagtttgcaggctggaaaaactgttgg
ttattttaggtacttggtttttatgaatgttaaacctttgtttttctatt
ttccttcacatacataatcataaatgaagaggttatagtagtccatttca
atgttacaccataataatatgaattttaattgaaaactttgtattgtttt
aattggaaatagattttcttttactgtattctcattatggatcctcctcc
cccaattcctctcagattctcctcattcacacaagtctacattctgtctg
tctgtctgtctgtctgtctgtctgtccgtctttctctgtcactccctttc
tttctttctctactgaaaacaaatttctcttctcatatgataaaacatga
ttacagctttccctctctctactcctccccgttcctcctcacttccctct
cagctggatccaccccttttctgtctctcattagaaaaaaaaaacacaag
gttctaaaagataataataaaatatagtataacaagattaaacaaatact
aatacagtggaataggaacaaataaatgaaccgaaggaaaagagcccaag
aaaagggcacaagaaagcagatacacatacagacactcacttgtttatac
actcagaaatcctataaaaaccattaagccagatcccataagatatagac
agaggacctgtaagataataagggagaaaataaaaatgttgaaataaata
aaaattaaaaaattgaggtttaaaacaaaaagtcctgaaataatataaga
catggaaatactctccaaaacgcattgagttcatgttctgtgacatgtag
cctgtcttacaatagtttgtttac
gaattccgtggtgcgcagtgagctttctgcgggctgagagacagtccctc
acatggcgataagatgagaccccctcctggttaattgctgatgtcaggag
ctgtggtttcccagtgatttttttctggaccatatttaatatcttttttc
tgcctttagcttaacccaggaataggttgtttcaatgctcacagagatga
gtccaggctgactggctattggcacagacagtggtgcttttgtggtaagg
agaaatttttcaggggcaaaggtggaccttgatcttatgactctataagc
ttaggctgtggtcatctagaccccagtagagatgttggatatatcaggat
gccttgctttccctctgtctttaatttcattggcttccatatggaagact
tacatgttaggatggtgttgaataatattacattaatatttatatgctac
ccccaagtaactgctatccacggacaatgtattgattaccctaggctctg
tcgataaacatacaatgatataactatccaactacaatttttaattctcc
aattatctccgaaatggcatatttattttgatatcaccatataaaacatc
ccatcttttaaaattaatattacctttaataacccatacactgtcaaatg
tcactgggttaaaattatccaaatatacaagcttctaacttctctaaagt
aattaaagacactaaaaagtctaaaatttttctaaaatatccactgtccc
tactgcatgcacctctaaaaaaatgttgcatagttttaatttttttaata
taggacggaagattcacggcatagtcacagtcaaataaaagcaggaacaa
atgtaactgtaaaatgttcagtgcttgacttctgagaccccactcatgat
ctctgggcccccctacacatctgggttcttcctcgagaataattccaatg
ttttcacctatatgattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60998557_60999329
seq2: B6Ng01-010K17.b_61_834 (reverse)

seq1  ATCTTATGGGATCTGGCTTAATGGTTTTTATAGGATTTCTGAGTGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGGGATCTGGCTTAATGGTTTTTATAGGATTTCTGAGTGTATAA  50

seq1  ACAAGTGAGTGTCTGTATGTGTATCTGCTTTCTTGTG-CCTTTTCTTGGG  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACAAGTGAGTGTCTGTATGTGTATCTGCTTTCTTGTGCCCTTTTCTTGGG  100

seq1  CTCTTTTCCTTCGGTTCATTTATTTGTTCCTATTCCACTGTATTAGTATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCCTTCGGTTCATTTATTTGTTCCTATTCCACTGTATTAGTATT  150

seq1  TGTTTAATCTTGTTATACTATATTTTATTATTATCTTTTAGAACCTTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATCTTGTTATACTATATTTTATTATTATCTTTTAGAACCTTGTG  200

seq1  TTTTTTTTTTCTAATGAGAGACAGAAAAGGGGTGGATCCAGCTGAGAGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCTAATGAGAGACAGAAAAGGGGTGGATCCAGCTGAGAGGG  250

seq1  AAGTGAGGAGGAACGGGGAGGAGTAGAGAGAGGGAAAGCTGTAATCATGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGAGGAACGGGGAGGAGTAGAGAGAGGGAAAGCTGTAATCATGT  300

seq1  TTTATCATATGAGAAGAGAAATTTGTTTTCAGTAGAGAAAGAAAGAAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATATGAGAAGAGAAATTTGTTTTCAGTAGAGAAAGAAAGAAAGG  350

seq1  GAGTGACAGAGAAAGACGGACAGACAGACAGACAGACAGACAGACAGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACAGAGAAAGACGGACAGACAGACAGACAGACAGACAGACAGACA  400

seq1  GAATGTAGACTTGTGTGAATGAGGAGAATCTGAGAGGAATTGGGGGAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAGACTTGTGTGAATGAGGAGAATCTGAGAGGAATTGGGGGAGGA  450

seq1  GGATCCATAATGAGAATACAGTAAAAGAAAATCTATTTCCAATTAAAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCATAATGAGAATACAGTAAAAGAAAATCTATTTCCAATTAAAACA  500

seq1  ATACAAAGTTTTCAATTAAAATTCATATTATTATGGTGTAACATTGAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGTTTTCAATTAAAATTCATATTATTATGGTGTAACATTGAAAT  550

seq1  GGACTACTATAACCTCTTCATTTATGATTATGTATGTGAAGGAAAATAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACTATAACCTCTTCATTTATGATTATGTATGTGAAGGAAAATAGA  600

seq1  AAAACAAAGGTTTAACATTCATAAAAACCAAGTACCTAAAATAACCAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGGTTTAACATTCATAAAAACCAAGTACCTAAAATAACCAACA  650

seq1  GTTTCTACAGCTTGCAAACTTGATCTAAAGCTGAAATCACCTCCCCTCCT  699
      |||| | |||| |||||||| |||||||||||||||||||||||||||||
seq2  GTTTTTCCAGCCTGCAAACTCGATCTAAAGCTGAAATCACCTCCCCTCCT  700

seq1  TTTGTCTAACAATTTACTCTGTGCACTTAATACTGTTGTAATTTCTTTAT  749
      ||||||||||||||||||| ||||||  |||| |||||||||||||||||
seq2  TTTGTCTAACAATTTACTCAGTGCACCAAATAGTGTTGTAATTTCTTTAT  750

seq1  CATCTAGATTATCCTAGAGAAATT  773
      |||||||||||||  |||||||||
seq2  CATCTAGATTATCGAAGAGAAATT  774

seq1: chr12_60832238_60832734
seq2: B6Ng01-010K17.g_155_1036

seq1  ATGTCAGGAGCTGTGGTTTCCCAGTGATTTTTTTCTGGACCATATTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGGAGCTGTGGTTTCCCAGTGATTTTTTTCTGGACCATATTTAAT  50

seq1  ATCTTTTTTCAGCCTTTAGCAGAACCCAGTAATAAAATACAAAGATGCTC  100
      |||||||||| |||||||||  ||||||| ||||   |      ||||||
seq2  ATCTTTTTTCTGCCTTTAGCTTAACCCAGGAATAGGTTGTTTCAATGCTC  100

seq1  ACAGAGATGAGTCAAGGCTGACTGGCTATTGGCACAGACAGTGGTGCTTT  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATGAGTCCAGGCTGACTGGCTATTGGCACAGACAGTGGTGCTTT  150

seq1  TAGTGGTAAGGAGAAATTTTTCAGGGGCAAAGGTTAAACATTGATCAGAT  200
      | ||||||||||||||||||||||||||||||| |  || ||||||  ||
seq2  T-GTGGTAAGGAGAAATTTTTCAGGGGCAAAGG-TGGACCTTGATCTTAT  198

seq1  GACAATATAAGCTTAGGCTGTGGTCATCTAGACCCGAGTAGAGATGTTGG  250
      |||  |||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACTCTATAAGCTTAGGCTGTGGTCATCTAGACCCCAGTAGAGATGTTGG  248

seq1  ATATATCAGGATGCCTTGCTTTCCCTCTGTCTTTAATTTCATTGGTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATATCAGGATGCCTTGCTTTCCCTCTGTCTTTAATTTCATTGGCTTCC  298

seq1  ATAT--AAGCCAAAGCGATGTTATGATGGTGTTGAATAATATTACATTAA  348
      ||||  ||| |  |   |||||| ||||||||||||||||||||||||||
seq2  ATATGGAAGACTTA--CATGTTAGGATGGTGTTGAATAATATTACATTAA  346

seq1  TATTAATATGCTACAACCAACAAACTGCTATCCACGGTCAATGTTTTGAT  398
      |||| |||||||||  ||||  ||||||||||||||| |||||| |||||
seq2  TATTTATATGCTACCCCCAAGTAACTGCTATCCACGGACAATGTATTGAT  396

seq1  TACATTGGGCTCACTTGAT-AACTCAAGATG--ATCCCTTTTCAA----T  441
      |||  | |||||  | ||| |||  |  |||  ||  || | |||     
seq2  TACCCTAGGCTCTGTCGATAAACATACAATGATATAACTATCCAACTACA  446

seq1  GTTGTTAACCCTGC--------CCCA----CCACATTTTTTTTTAAAAAA  479
       || ||||  || |        || |     || |||| |||| | |  |
seq2  ATTTTTAATTCTCCAATTATCTCCGAAATGGCATATTTATTTTGATATCA  496

seq1  GGATTTA----ATGATTTTTTT----------------------------  497
        || ||    ||    | |||                            
seq2  CCATATAAAACATCCCATCTTTTAAAATTAATATTACCTTTAATAACCCA  546

seq1  --------------------------------------------------  497
                                                        
seq2  TACACTGTCAAATGTCACTGGGTTAAAATTATCCAAATATACAAGCTTCT  596

seq1  --------------------------------------------------  497
                                                        
seq2  AACTTCTCTAAAGTAATTAAAGACACTAAAAAGTCTAAAATTTTTCTAAA  646

seq1  --------------------------------------------------  497
                                                        
seq2  ATATCCACTGTCCCTACTGCATGCACCTCTAAAAAAATGTTGCATAGTTT  696

seq1  --------------------------------------------------  497
                                                        
seq2  TAATTTTTTTAATATAGGACGGAAGATTCACGGCATAGTCACAGTCAAAT  746

seq1  --------------------------------------------------  497
                                                        
seq2  AAAAGCAGGAACAAATGTAACTGTAAAATGTTCAGTGCTTGACTTCTGAG  796

seq1  --------------------------------------------------  497
                                                        
seq2  ACCCCACTCATGATCTCTGGGCCCCCCTACACATCTGGGTTCTTCCTCGA  846

seq1  ------------------------------------  497
                                          
seq2  GAATAATTCCAATGTTTTCACCTATATGATTTTTTT  882