BAC Information

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BAC

Clone NameB6Ng01-010M24
Chromosome12 (Build37)
Map Location 11,788,023 - 11,789,144
singlet/doubletsinglet
Overlap geneLOC628327
Upstream geneLOC100042308, EG668435, Kcns3, LOC628276, Msgn1, 5830483C08Rik, Smc6, Vsnl1, EG209550, LOC217390
Downstream geneLOC627110, LOC100043209, D12Ertd553e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010M24.bB6Ng01-010M24.g
ACCDH846374DH846375
length1,0021,110
definitionDH846374|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M24, 5' end.DH846375|Mus musculus domesticus DNA, BAC clone: B6Ng01-010M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgatccacttagatttgaccttagtacaaggagataggaatg
gatcaattcacattcttctacatgataaccaccagttgtgccagcaccat
ttgttgaaaatgctgtctttcttccactggatggttttagctcccttgtc
aaagatcaagtgaccataggtatgtgggttcatttctgggtcttcaattc
tattccattggtctacttgtctgttgctataacagtaccatgcagttttt
tatcacaattgctctgtagtacagctttaggtcaggcatggtgattccac
cagaggttcttttatccttgagaagactttttgctatcctaggttttttg
ttattgcagatgaatttgcagattgctctttctatttcgttgaagaattg
agttggaattttgatggggattgcattgaatctgtagattgcttttggca
agatagccatttttcaatgttgatcctgccaatccatgagcatgggagat
ctttccatcttctgagatcttctttattttctttcttcagagacttgaag
tccttatcatacagatctatcacttccttagttagagtcatgccaagata
ttttatattatttgtgactattgagaagggtgttgttttcctaatttctt
tctcagcctgtttatcctttgtgtacagaaaggccattgacttgtttgag
ttaattttatatccagctacttcaccaaagctgtttatcaggtttaggag
ttctctggtggaatttttagggtcacttatatatattatcatatcatctg
caaaaagtgatattttgacttcttcctttccaatttgtatccccttgatc
tcctttttgttgttgaattgctctggctaggacttcaagtacatgttgaa
taggtagggagaaagttggcaccttgtccagtcactgattttagtggggt
tgctccagcctctcaccattactttgatgtggctacgggttgctcagatg
ct
gaattcactaaatgtagagaatgtctcaatgccttctgtggcctgcacta
acctaagagttaagaggtgaagagtcttgttaccaataaccagaacttca
gatacctgtttctttcaaatgggaggaaatttagtaatatttgtagagaa
agtaagcaatatttgttaatatattcattgctttcacgtaaggtcaattg
ttccatgtgctgtgctctcctggggtcaggatgacggtgtctgagatctg
aggacaatgtgctcttctgtggtcttagaaacaggaacacggctttgcgg
aaaatcctatcagactttgaatctgccctttcatcttaaggtaagccaga
cgtttcagtctttaaagaagaatgagaatgtggcttgtttattgcgagaa
cataggtaatctgaaaaggaaacagtttttaaattaaagatggtatctca
tatattggagaaaacaagaatgtgaatgctgccttgtgtggcaggcaggg
gaggtagtgactctggaatgggggtggcgcttattcatcttgtgaactac
catggtctgcttcatcttttagggcctcagactcccactcttgagcacga
aagataattttctcatgggatagaagagattagctctaagatattgtttc
aatgctaaagcacagtataattatgaaagggattccaaagtccatgttgc
tgaaggatggataattgagccaagagttctgatcctaattctaaaatctg
caattataaaggctgactttctgtggtttaaacagaaaagggatggggct
tctactgcttgcccttcccccacctcagaggatccataaaatagagttgg
aaaggctattctcatcatttcattccatgaccacttgttactcatacttg
ttttatttgaatgtgcacatgttgtttgtgtacaaatatatgtatagatg
ggcatatggatacatgctcattattgtgtagagagcatatggacattttc
gagcactaagtgtcatgttcagatctctatactcctccatctcttttgct
ccacattctggactgcaagtacaatgctctacttgctttttatgtggaag
cctggaaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_11788023_11789144
seq2: B6Ng01-010M24.g_65_1174

seq1  GAATTCACTAAATGTAGAGAATGTCTCAATGCCTTCTGTGGCCTGCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAATGTAGAGAATGTCTCAATGCCTTCTGTGGCCTGCACTA  50

seq1  ACCTAAGAGTTAAGAGGTGAAGAGTCTTGTTACCAATAACCAGAACTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGAGTTAAGAGGTGAAGAGTCTTGTTACCAATAACCAGAACTTCA  100

seq1  GATACCTGTTTCTTTCAAATGGGAGGAAATTTAGTAATATTTGTAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTGTTTCTTTCAAATGGGAGGAAATTTAGTAATATTTGTAGAGAA  150

seq1  AGTAAGCAATATTTGTTAATATATTCATTGCTTTCACGTAAGGTCAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCAATATTTGTTAATATATTCATTGCTTTCACGTAAGGTCAATTG  200

seq1  TTCCATGTGCTGTGCTCTCCTGGGGTCAGGATGACGGTGTCTGAGATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTGCTGTGCTCTCCTGGGGTCAGGATGACGGTGTCTGAGATCTG  250

seq1  AGGACAATGTGCTCTTCTGTGGTCTTAGAAACAGGAACACGGCTTTGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAATGTGCTCTTCTGTGGTCTTAGAAACAGGAACACGGCTTTGCGG  300

seq1  AAAATCCTATCAGACTTTGAATCTGCCCTTTCATCTTAAGGTAAGCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTATCAGACTTTGAATCTGCCCTTTCATCTTAAGGTAAGCCAGA  350

seq1  CGTTTCAGTCTTTAAAGAAGAATGAGAATGTGGCTTGTTTATTGCGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCAGTCTTTAAAGAAGAATGAGAATGTGGCTTGTTTATTGCGAGAA  400

seq1  CATAGGTAATCTGAAAAGGAAACAGTTTTTAAATTAAAGATGGTATCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTAATCTGAAAAGGAAACAGTTTTTAAATTAAAGATGGTATCTCA  450

seq1  TATATTGGAGAAAACAAGAATGTGAATGCTGCCTTGTGTGGCAGGCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGGAGAAAACAAGAATGTGAATGCTGCCTTGTGTGGCAGGCAGGG  500

seq1  GAGGTAGTGACTCTGGAATGGGGGTGGCGCTTATTCATCTTGTGAACTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGTGACTCTGGAATGGGGGTGGCGCTTATTCATCTTGTGAACTAC  550

seq1  CATGGTCTGCTTCATCTTTTAGGGCCTCAGACTCCCACTCTTGAGCACGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCTGCTTCATCTTTTAGGGCCTCAGACTCCCACTCTTGAGCACGA  600

seq1  AAGATAATTTTCTCATGGGATAGAAGAGATTAGCTCTAAGATATTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATTTTCTCATGGGATAGAAGAGATTAGCTCTAAGATATTGTTTC  650

seq1  AATGCTAAAGCACAGTATAATTATGAAAGGGATTCCAAAGTCCATGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAAGCACAGTATAATTATGAAAGGGATTCCAAAGTCCATGTTGC  700

seq1  TGAAGGATGGATAATTGAGCCAAGAGTTCTGATCCTAATTCTAAAATCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATGGATAATTGAGCCAAGAGTTCTGATCCTAATTCTAAAATCTG  750

seq1  CAATTATAAAGGCTGACTTTCTGTGGTTTAAACAGAAAAGGGATGGGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATAAAGGCTGACTTTCTGTGGTTTAAACAGAAAAGGGATGGGGCT  800

seq1  TCTACTGCTTGCCCTTCCCCCACCTCAGAGGATCCATAAAATAGAGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGCTTGCCCTTCCCCCACCTCAGAGGATCCATAAAATAGAGTTGG  850

seq1  -AAGGCTATTCTCATCATTTCATTCCATGACCACTTGTTACTCATACTTG  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTATTCTCATCATTTCATTCCATGACCACTTGTTACTCATACTTG  900

seq1  TTTTATTTGAATGTGCACATGTTTGTTTGTGTACACATATATGTATAGAT  949
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  TTTTATTTGAATGTGCACATG-TTGTTTGTGTACAAATATATGTATAGAT  949

seq1  GGGCATATGGATACATGCTCATATATGTGTAGGAGTGCATATGGACATTT  999
      ||||||||||||||||||||||   |||||| ||| ||||||||||||||
seq2  GGGCATATGGATACATGCTCATTATTGTGTA-GAGAGCATATGGACATTT  998

seq1  ACAGAGCAGCTAAGTGTCCATGTTCAGAATCTCTATTACT-CTCCATCTC  1048
       | ||||| |||||||| ||||||||| ||||||| |||| |||||||||
seq2  TC-GAGCA-CTAAGTGT-CATGTTCAG-ATCTCTA-TACTCCTCCATCTC  1043

seq1  TTTTGCCCTCCACCATTCTGGGACTGCAAATGTACATTGCCTCACCTGGC  1098
      |||||  ||||| |||||| |||||||||  ||||| || |||  || ||
seq2  TTTTG--CTCCA-CATTCT-GGACTGCAA--GTACAATG-CTCTACTTGC  1086

seq1  TTTTTATGTGGATGCTTGGAACCC  1122
      |||||||||||| || ||||||||
seq2  TTTTTATGTGGAAGCCTGGAACCC  1110