BAC Information

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BAC

Clone NameB6Ng01-011K20
Chromosome12 (Build37)
Map Location 71,802,832 - 71,980,663
singlet/doubletdoublet
Overlap geneFrmd6
Upstream geneL2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream geneActr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1, LOC666213
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011K20.bB6Ng01-011K20.g
ACCDH846994DH846995
length8941,123
definitionDH846994|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K20, 5' end.DH846995|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,979,771 - 71,980,663)(71,802,832 - 71,803,956)
sequence
gaattcttttcccgaggatagggcactactcagtgctgttggatggtgta
tgtatgtatgtgtctgtgtgtatgtggggcgggggcgggggcacagagat
aaagggttaacattcattagccctatggggtttactcgtggctaagtcat
ctattttccttctttacagggcattccatccctaccatataaagtgggtg
tgcacttcatgcaggcgaaggctgactaatgacctttctaggccttagaa
atatgctctatgtactaatactccttactcttactttgcacctgctgacg
acagaaaatagcaaatgctagcttttcatggaacattagccccgcgtatt
tcttctttcatatgaaggtctctcaaagtttaaaaggaaaaggaaaacaa
gctcatgtttcctgtagtttctgttcgctgaagtgtaatctctagcactg
aatcccacaccaaagaaagaggttcacaaccagctaagtctagtttacac
cctgacacggatcatgcatccgtttccaagaagatagagtctgttctccg
cccctcagcttgcacccttgatttcataggaagctcccccttctccaggc
tcacacttagtttcttgttgtttttcaagaaggggtttctctatgtatcc
ctggctgtcctgggactcattctgtagaccaggctggcctcagagatctg
ccctgcctctgccttccaagtgctgggattaaagatgtgtgcttactctt
gatttttaatctagtgattagagtacgagcaagacctcaagttgagggga
aaccagctaatgaaaatcaagtgagttgagagttgtgggtcttgttcctt
cttgggaaagaatataagcatattttaataaatcttgtttccaa
gaattcctgtgccctagtgaacctgggcttcaccgcacttcaacatcgca
gtatctcagtgggggttaagtcatgctcaccaagaattaagttgtaaatt
tgctttgaatttttcaaaagaatctgtaccattaaaataggaaccactgt
tctgccatttaaataatctcattggcaaaggacatgcattaatcaccaca
gtggagatttttatattcttgggacatctcccagccgaaagaaagaaagc
atctccatgctttacaaacatattcctcacatccacatcggtccttgtca
tgagggagtaaaccaaggcctgaaatggctaaacagctgcccttagaacc
tcgagagctgaaggcagaggacaggtgagcactgttcaagggcgtaatca
agagagatggctgtgtaaatatttagatagatggacaaacagagcagaga
tgcagatgcacagggaagccctctcttcctccccctgctcatcagagaag
cggcttgtatttcccaacagagtctccaggaaaacctccatgggaggaga
acgctcatgaattatgaacacccttagaaaatattcaacagctgccttgt
gctcagggggtgacagtgcattccaaagagcctgttcaaggggacccata
ttttcattcgcagtaagaacaggtacttcttccagtcagatccagagggg
aagctcctgtagcatcacggaagacagagagtcaaggggtggacttagca
tccctccatccagtgccccaccatcctgccccctgtgtgctttgcatgca
gaaccacagaacagtgggcagcggttgccagttcctcctgtggacattgg
gtgagtggtctgcggatcatggtgatctgggtcaccaacaggaaaggata
tgagtgatttgtgtcttcttcagctgttctccaaagaaacagcaaagtta
agctctgcatgcgtgaggcactagtcccttgcctcagtgaagctggctag
cttttcagtctggttgagcctttttctggtgatgttggagaaggtacctt
acttttctggtttttaagcacggatgagttggaacccgcctctcaactgc
ttgtctctaccaggcctgtgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71979771_71980663
seq2: B6Ng01-011K20.b_44_937 (reverse)

seq1  TTGG-AACAAGATTTATT-AAATATGCTTATATTCTTTCCCAAG-AGGGA  47
      |||| ||||||||||||| ||||||||||||||||||||||||| ||| |
seq2  TTGGAAACAAGATTTATTAAAATATGCTTATATTCTTTCCCAAGAAGGAA  50

seq1  CAGGGCCACAAACTCTCAAACTC-CTTGGTTTTCCATTAGCCTGGTTTCC  96
      || | ||   ||||||| ||||| |||| |||| |||||| |||||||||
seq2  CAAGACCCACAACTCTC-AACTCACTTGATTTT-CATTAG-CTGGTTTCC  97

seq1  CCTTCACTTGAGGTCTTGCTCGTACTCTTAATCACTAGTTTAAAAATTAA  146
      |||  |||||||||||||||||||||| |||||||||| |||||||| ||
seq2  CCTCAACTTGAGGTCTTGCTCGTACTC-TAATCACTAGATTAAAAATCAA  146

seq1  GAGTAAGCACACATCTTTAATCCCAGCACTTGGAAGGCAGAGGCA-GGCA  195
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGTAAGCACACATCTTTAATCCCAGCACTTGGAAGGCAGAGGCAGGGCA  196

seq1  GATCTCTGCGGCCAGCCTGGTCTACAGAATGAGTCCCAGGACAGCCAGGG  245
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGAGGCCAGCCTGGTCTACAGAATGAGTCCCAGGACAGCCAGGG  246

seq1  ATACATAGAGAAACCCCTTCTTGAAAAACAACAAGAAACTAAGTGTGAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGAGAAACCCCTTCTTGAAAAACAACAAGAAACTAAGTGTGAGC  296

seq1  CTGGAGAAGGGGGAGCTTCCTATGAAATCAAGGGTGCAAGCTGAGGGGCG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAGGGGGAGCTTCCTATGAAATCAAGGGTGCAAGCTGAGGGGCG  346

seq1  GAGAACAGACTCTATCTTCTTGGAAACGGATGCATGATCCGTGTCAGGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAGACTCTATCTTCTTGGAAACGGATGCATGATCCGTGTCAGGGT  396

seq1  GTAAACTAGACTTAGCTGGTTGTGAACCTCTTTCTTTGGTGTGGGATTCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTAGACTTAGCTGGTTGTGAACCTCTTTCTTTGGTGTGGGATTCA  446

seq1  GTGCTAGAGATTACACTTCAGCGAACAGAAACTACAGGAAACATGAGCTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGAGATTACACTTCAGCGAACAGAAACTACAGGAAACATGAGCTT  496

seq1  GTTTTCCTTTTCCTTTTAAACTTTGAGAGACCTTCATATGAAAGAAGAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTTTCCTTTTAAACTTTGAGAGACCTTCATATGAAAGAAGAAA  546

seq1  TACGCGGGGCTAATGTTCCATGAAAAGCTAGCATTTGCTATTTTCTGTCG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCGGGGCTAATGTTCCATGAAAAGCTAGCATTTGCTATTTTCTGTCG  596

seq1  TCAGCAGGTGCAAAGTAAGAGTAAGGAGTATTAGTACATAGAGCATATTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGTGCAAAGTAAGAGTAAGGAGTATTAGTACATAGAGCATATTT  646

seq1  CTAAGGCCTAGAAAGGTCATTAGTCAGCCTTCGCCTGCATGAAGTGCACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGCCTAGAAAGGTCATTAGTCAGCCTTCGCCTGCATGAAGTGCACA  696

seq1  CCCACTTTATATGGTAGGGATGGAATGCCCTGTAAAGAAGGAAAATAGAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTATATGGTAGGGATGGAATGCCCTGTAAAGAAGGAAAATAGAT  746

seq1  GACTTAGCCACGAGTAAACCCCATAGGGCTAATGAATGTTAACCCTTTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGCCACGAGTAAACCCCATAGGGCTAATGAATGTTAACCCTTTAT  796

seq1  CTCTGTGCCCCCGCCCCCGCCCCACATACACACAGACACATACATACATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCCCCCGCCCCCGCCCCACATACACACAGACACATACATACATA  846

seq1  CACCATCCAACAGCACTGAGTAGTGCCCTATCCTCGGGAAAAGAATTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCAACAGCACTGAGTAGTGCCCTATCCTCGGGAAAAGAATTC  894

seq1: chr12_71802832_71803956
seq2: B6Ng01-011K20.g_67_1189

seq1  GAATTCCTGTGCCCTAGTGAACCTGGGCTTCACCGCACTTCAACATCGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGCCCTAGTGAACCTGGGCTTCACCGCACTTCAACATCGCA  50

seq1  GTATCTCAGTGGGGGTTAAGTCATGCTCACCAAGAATTAAGTTGTAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCAGTGGGGGTTAAGTCATGCTCACCAAGAATTAAGTTGTAAATT  100

seq1  TGCTTTGAATTTTTCAAAAGAATCTGTACCATTAAAATAGGAACCACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAATTTTTCAAAAGAATCTGTACCATTAAAATAGGAACCACTGT  150

seq1  TCTGCCATTTAAATAATCTCATTGGCAAAGGACATGCATTAATCACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATTTAAATAATCTCATTGGCAAAGGACATGCATTAATCACCACA  200

seq1  GTGGAGATTTTTATATTCTTGGGACATCTCCCAGCCGAAAGAAAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGATTTTTATATTCTTGGGACATCTCCCAGCCGAAAGAAAGAAAGC  250

seq1  ATCTCCATGCTTTACAAACATATTCCTCACATCCACATCGGTCCTTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATGCTTTACAAACATATTCCTCACATCCACATCGGTCCTTGTCA  300

seq1  TGAGGGAGTAAACCAAGGCCTGAAATGGCTAAACAGCTGCCCTTAGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAGTAAACCAAGGCCTGAAATGGCTAAACAGCTGCCCTTAGAACC  350

seq1  TCGAGAGCTGAAGGCAGAGGACAGGTGAGCACTGTTCAAGGGCGTAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAGCTGAAGGCAGAGGACAGGTGAGCACTGTTCAAGGGCGTAATCA  400

seq1  AGAGAGATGGCTGTGTAAATATTTAGATAGATGGACAAACAGAGCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGGCTGTGTAAATATTTAGATAGATGGACAAACAGAGCAGAGA  450

seq1  TGCAGATGCACAGGGAAGCCCTCTCTTCCTCCCCCTGCTCATCAGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGCACAGGGAAGCCCTCTCTTCCTCCCCCTGCTCATCAGAGAAG  500

seq1  CGGCTTGTATTTCCCAACAGAGTCTCCAGGAAAACCTCCATGGGAGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTGTATTTCCCAACAGAGTCTCCAGGAAAACCTCCATGGGAGGAGA  550

seq1  ACGCTCATGAATTATGAACACCCTTAGAAAATATTCAACAGCTGCCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCATGAATTATGAACACCCTTAGAAAATATTCAACAGCTGCCTTGT  600

seq1  GCTCAGGGGGTGACAGTGCATTCCAAAGAGCCTGTTCAAGGGGACCCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGGGGTGACAGTGCATTCCAAAGAGCCTGTTCAAGGGGACCCATA  650

seq1  TTTTCATTCGCAGTAAGAACAGGTACTTCTTCCAGTCAGATCCAGAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTCGCAGTAAGAACAGGTACTTCTTCCAGTCAGATCCAGAGGGG  700

seq1  AAGCTCCTGTAGCATCACGGAAGACAGAGAGTCAAGGGGTGGACTTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTGTAGCATCACGGAAGACAGAGAGTCAAGGGGTGGACTTAGCA  750

seq1  TCCCTCCATCCAGTGCCCCACCATCCTGCCCCCTGTGTGCTTTGCATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCATCCAGTGCCCCACCATCCTGCCCCCTGTGTGCTTTGCATGCA  800

seq1  GAACCACAGAACAGTGGGCAGCGGTTGCCAGTTCCTCCTGTGGACATT-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAACCACAGAACAGTGGGCAGCGGTTGCCAGTTCCTCCTGTGGACATTGG  850

seq1  GTGAGTGGTCTGCGGATCATGGTGATCT-GGTCACCAACAGG-AAGGATA  897
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  GTGAGTGGTCTGCGGATCATGGTGATCTGGGTCACCAACAGGAAAGGATA  900

seq1  TGAGTGATTTGTGTC-TCTTCAGCTGTTCTCCAAAG-AACAGCAAAGTT-  944
      ||||||||||||||| |||||||||||||||||||| |||||||||||| 
seq2  TGAGTGATTTGTGTCTTCTTCAGCTGTTCTCCAAAGAAACAGCAAAGTTA  950

seq1  AGCTCTGCCAGGCGTGAGGCACTAGTCCCTTGGCTCAGTGGAAGCTGGCT  994
      ||||||| || ||||||||||||||||||||| |||||| ||||||||||
seq2  AGCTCTG-CATGCGTGAGGCACTAGTCCCTTGCCTCAGT-GAAGCTGGCT  998

seq1  AGC-TTTCAGCCTGGTTGAGCCTTTTTCTTGGTGATGTTGGAGAAGTCAC  1043
      ||| |||||| ||||||||||||||||| |||||||||||||||||  ||
seq2  AGCTTTTCAGTCTGGTTGAGCCTTTTTC-TGGTGATGTTGGAGAAGGTAC  1047

seq1  TTCACTTTTCTGGTTTTTAGGTTTCAGGTATGAGTTTGAACCAG-CTCTG  1092
       | |||||||||||||||| |   || | ||||||| ||||| | |||| 
seq2  CTTACTTTTCTGGTTTTTAAG---CACGGATGAGTTGGAACCCGCCTCT-  1093

seq1  CAACTGCTTGTCTCTTACACAGGCCCTGTGTTC  1125
      |||||||||||||| ||| |||| |||||||||
seq2  CAACTGCTTGTCTC-TAC-CAGG-CCTGTGTTC  1123