BAC Information

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BAC

Clone NameB6Ng01-012C22
Chromosome12 (Build37)
Map Location 104,852,316 - 104,853,496
singlet/doubletsinglet
Overlap genenone
Upstream geneItpk1, Moap1, D230037D09Rik, 5730410I19Rik, Btbd7, EG634678, Cox8c, 9030205A07Rik, LOC667269, Prima1, EG544888, Asb2, Otub2, Ddx24, D12Ertd647e, Ifi27, 1810023F06Rik, 8430415E04Rik
Downstream geneSerpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c, Serpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012C22.bB6Ng01-012C22.g
ACCDH847344DH847345
length1,1851,167
definitionDH847344|Mus musculus domesticus DNA, BAC clone: B6Ng01-012C22, 5' end.DH847345|Mus musculus domesticus DNA, BAC clone: B6Ng01-012C22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtagtttgagtagtttgagtcttctgctagcctaagatatat
ggacttgaatctgttgtggtctggagaattcattgtgcagaaggggacag
caagtctgcgccagttttccaggattctggtttaccacaccagcactgac
tctgtttacatcgaataccacagagagtttcgatttgattgttaaataat
acacttagtgcttaaaagcttttcatattcctgtttatctatgtggggta
aaggaaagcgatctggcagagactagtcaccactgcttataaagctggaa
gtcaattgtttaggcattaaattaccaattaaaacagttattcaaaatta
cctttgtaagtattttgtcacaagtattaaaacctttaaaattttttgaa
cctttgttaaaattataccctagaggcagatatgctaaaaagcaaacaag
tggcagatacgaacatgtatctactcatatcttcatcttatcagaagact
taatcgtcctttaactaggtgcgtgacagagtgctctgcttcatctgcag
cagtgatggcctgcctagcattggatttggccatgtttatttcagtatgg
tgtagctataggcttcctttcctagattccatctagtaatgagaagagtg
ctaaaactctctctttaaattcctttttctggttctgagttcaattccta
tcattcacatggtggctcacagccatctataactgttgccctctgggatc
tgatgtcctcttctggtgtacagatgaacatgcaaacaaaacattcatat
acattaaagaaatctttaattttttctctgtctattgttttcccacaaat
atatctaaataactgagcataagtaccctgaatgccagctagaaccatcc
ttgatctctcttcctagtccccagagctgtctgaacccaaatgaacatct
gttaatgccctggaataactacagagtgacttaatgtcgagattgaggtg
gggacaatctggctaagactgcctcttgatggaaccttcttacttcatgg
tgactttggagttgtcaccaagtacctaatcaatgcatcgatataaggtg
ttaggtataactagaatgaactaaaatggcagctagccctggagtccagc
acagctgcattctgagaacatagttgtgtcttgat
gaattctcacctgacgaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcagttgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccattctggaaatccgtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
acggatggacctggagggcatcatcctgagtgaggtaaaacattcacaaa
ggaactcacaaaatatgtactcactgataagtggatattagcccaaaacc
tagaacacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctctttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtactcaaggagctaaagggactgcaccctat
aggtggatcacatatgaactacagtaccccggagctctgactctagctgc
atatgtatcaagatgcctagtcgccatcaccgaaagagagtccatgaacc
acaaactttatattgcccaaaacaggtacgcctaggttaaaggaggatgg
ccggctagggaatggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_104852316_104853496
seq2: B6Ng01-012C22.b_45_1229

seq1  GAATTCAAGTAGTTTGAGTAGTTTGAGTCTTCTGCTAGCCTAAGATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAGTTTGAGTAGTTTGAGTCTTCTGCTAGCCTAAGATATAT  50

seq1  GGACTTGAATCTGTTGTGGTCTGGAGAATTCATTGTGCAGAAGGGGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGAATCTGTTGTGGTCTGGAGAATTCATTGTGCAGAAGGGGACAG  100

seq1  CAAGTCTGCGCCAGTTTTCCAGGATTCTGGTTTACCACACCAGCACTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTGCGCCAGTTTTCCAGGATTCTGGTTTACCACACCAGCACTGAC  150

seq1  TCTGTTTACATCGAATACCACAGAGAGTTTCGATTTGATTGTTAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTACATCGAATACCACAGAGAGTTTCGATTTGATTGTTAAATAAT  200

seq1  ACACTTAGTGCTTAAAAGCTTTTCATATTCCTGTTTATCTATGTGGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGTGCTTAAAAGCTTTTCATATTCCTGTTTATCTATGTGGGGTA  250

seq1  AAGGAAAGCGATCTGGCAGAGACTAGTCACCACTGCTTATAAAGCTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGCGATCTGGCAGAGACTAGTCACCACTGCTTATAAAGCTGGAA  300

seq1  GTCAATTGTTTAGGCATTAAATTACCAATTAAAACAGTTATTCAAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGTTTAGGCATTAAATTACCAATTAAAACAGTTATTCAAAATTA  350

seq1  CCTTTGTAAGTATTTTGTCACAAGTATTAAAACCTTTAAAATTTTTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTAAGTATTTTGTCACAAGTATTAAAACCTTTAAAATTTTTTGAA  400

seq1  CCTTTGTTAAAATTATACCCTAGAGGCAGATATGCTAAAAAGCAAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTAAAATTATACCCTAGAGGCAGATATGCTAAAAAGCAAACAAG  450

seq1  TGGCAGATACGAACATGTATCTACTCATATCTTCATCTTATCAGAAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATACGAACATGTATCTACTCATATCTTCATCTTATCAGAAGACT  500

seq1  TAATCGTCCTTTAACTAGGTGCGTGACAGAGTGCTCTGCTTCATCTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCGTCCTTTAACTAGGTGCGTGACAGAGTGCTCTGCTTCATCTGCAG  550

seq1  CAGTGATGGCCTGCCTAGCATTGGATTTGGCCATGTTTATTTCAGTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGGCCTGCCTAGCATTGGATTTGGCCATGTTTATTTCAGTATGG  600

seq1  TGTAGCTATAGGCTTCCTTTCCTAGATTCCATCTAGTAATGAGAAGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTATAGGCTTCCTTTCCTAGATTCCATCTAGTAATGAGAAGAGTG  650

seq1  CTAAAACTCTCTCTTTAAATTCCTTTTTCTGGTTCTGAGTTCAATTCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTCTCTCTTTAAATTCCTTTTTCTGGTTCTGAGTTCAATTCCTA  700

seq1  TCATTCACATGGTGGCTCACAGCCATCTATAACTGTTGCCCTCTGGGATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACATGGTGGCTCACAGCCATCTATAACTGTTGCCCTCTGGGATC  750

seq1  TGATGTCCTCTTCTGGTGTACAGATGAACATGCAAACAAAACATTCATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCTCTTCTGGTGTACAGATGAACATGCAAACAAAACATTCATAT  800

seq1  ACATTAAAGAAATCTTTAATTTTTTCTCTGTCTATTGTTTTCCCACAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAGAAATCTTTAATTTTTTCTCTGTCTATTGTTTTCCCACAAAT  850

seq1  ATATCTAAATAACTGAGCATAAGTACCCTGAATGCCAGCTAGAACCATCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAAATAACTGAGCATAAGTACCCTGAATGCCAGCTAGAACCATCC  900

seq1  TTGATCTCTCTTCCTAGTCCCCAGAGCTGTCTGAACCCAAATGAACATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTCTCTTCCTAGTCCCCAGAGCTGTCTGAACCCAAATGAACATCT  950

seq1  GTTAATGCCCTGGAATAACTACAAGAGTGACTTAATGTCGAGATTGAGGT  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTTAATGCCCTGGAATAACTAC-AGAGTGACTTAATGTCGAGATTGAGGT  999

seq1  GGGGAC-ATCTGGCTTAGACTGCCTCTTGATGGAACC-TCTTAC-TCAT-  1046
      |||||| |||||||| ||||||||||||||||||||| |||||| |||| 
seq2  GGGGACAATCTGGCTAAGACTGCCTCTTGATGGAACCTTCTTACTTCATG  1049

seq1  GTGACTTTGGAGTTGTCACCAAGTACCTAATCAATGCATCGATTTTATAT  1096
      ||||||||||||||||||||||||||||||||||||||||||   |||| 
seq2  GTGACTTTGGAGTTGTCACCAAGTACCTAATCAATGCATCGA---TATAA  1096

seq1  GTGTTTATGTATTAACTAG-ATG-ACTAAAAT-GCAGCTAAGCCCT-GAG  1142
      |   ||| ||| ||||||| ||| |||||||| |||||| |||||| |||
seq2  GGTGTTAGGTA-TAACTAGAATGAACTAAAATGGCAGCT-AGCCCTGGAG  1144

seq1  T-CAGCACAGCTGCCATTCTGAGA--CTAGTTG-GTCTCTGAT  1181
      | ||||||||||| ||||||||||   |||||| |||| ||||
seq2  TCCAGCACAGCTG-CATTCTGAGAACATAGTTGTGTCT-TGAT  1185