BAC Information

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BAC

Clone NameB6Ng01-014P19
Chromosome12 (Build37)
Map Location 112,802,775 - 112,936,078
singlet/doubletdoublet
Overlap geneMark3, Ckb, 6720458F09Rik
Upstream genePpp2r5c, 9430024F10Rik, Dync1h1, 1700001K19Rik, Hsp90aa1, Wdr20a, Rage, 2810455K09Rik, LOC100041649, 2810452K22Rik, 4930573I19Rik, Ankrd9, 6030440G07Rik, Rcor1, 4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5
Downstream geneBag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a, A730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014P19.bB6Ng01-014P19.g
ACCDH849377DH849378
length755456
definitionDH849377|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P19, 5' end.DH849378|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,802,775 - 112,803,525)(112,935,617 - 112,936,078)
sequence
gaattcaggtcccaggttgtcctctgacctccacatgcactggggacaaa
tgcacgcttgtggtcacacacagaaaaaaattaaatcctttttcttactg
tttaattgtctttcctcctttctttctttttttttctttatttcattttc
aagatttatttatttattatatgtaagtacactgtagctgtcttcagaca
cgccagaagggggtgtcagatctcattacagatggttgtgagccaccatg
tggttgctgggatttgaactctggaccttcggaagagcagtcgggtactc
ttacccactgagccaactcaccagcccccttctcctttctttctataatt
actactagcctggtatagaatcccaaggcactgctcatttttacctaaac
tgaagacctggccacatggtcttcagataggaaagcatccagtactgcta
gatgcaacaatgtggctggcttcacatcaccttttaatctccttcccctt
ctcttagagctttttgtaattcttacccccacccccacccccccaccctg
agacagtgtttctctgtgtagccctagctgtcctggaactctctctgttt
taacttttaaactcagagacccacctgctactgctatgtcctgagcactg
ggacaaaggtgagcaccaccacggtctggctcaacctcgttctttttgat
gagtctgggttgtctcagtgccacattcatctctgctgagttgcccttcg
cctgg
tcatggcacgtgagcccagagagccaagcactctacttctctgcagcctg
agcccagtcctggtctatcctgtctatcagctggctgagcaggctcccag
tgccccttgtgctcggatgcatggtcccctttttcttctgatactgcagt
ttccatccgtccacggaaggtcatcttttgactcttactcctgaccaaag
aaaaagcagacatcccagaactgacatggttactggaagggacctaaggc
cagggccatgtgagagcctcggcagggacaagcaggcgatgagaacagcc
agtgcaaaaagcctccaggctcattaagaatctgcagagctggatccctg
gacttcagactgtaggcacaggcacgccaaggggcatcttgtcatttccc
aagaatgggccatgagggtgtggggctggagcaatgtctcaggggggggg
ggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_112802775_112803525
seq2: B6Ng01-014P19.b_45_799

seq1  GAATTCAGGTCCCAGGTTGTCCTCTGACCTCCACATGCACTGGGGACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCCAGGTTGTCCTCTGACCTCCACATGCACTGGGGACAAA  50

seq1  TGCACGCTTGTGGTCACACACAGAAAAAAATTAAATCCTTTTTCTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCTTGTGGTCACACACAGAAAAAAATTAAATCCTTTTTCTTACTG  100

seq1  TTTAATTGTCTTTCCTCCTTTCTTTCTTTTTTTTTCTTTATTTCATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGTCTTTCCTCCTTTCTTTCTTTTTTTTTCTTTATTTCATTTTC  150

seq1  AAGATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACA  200

seq1  CGCCAGAAGGGGGTGTCAGATCTCATTACAGATGGTTGTGAGCCACCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGAAGGGGGTGTCAGATCTCATTACAGATGGTTGTGAGCCACCATG  250

seq1  TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTACTC  300

seq1  TTACCCACTGAGCCAACTCACCAGCCCCCTTCTCCTTTCTTTCTATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCACTGAGCCAACTCACCAGCCCCCTTCTCCTTTCTTTCTATAATT  350

seq1  ACTACTAGCCTGGTATAGAATCCCAAGGCACTGCTCATTTTTACCTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAGCCTGGTATAGAATCCCAAGGCACTGCTCATTTTTACCTAAAC  400

seq1  TGAAGACCTGGCCACATGGTCTTCAGATAGGAAAGCATCCAGTACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACCTGGCCACATGGTCTTCAGATAGGAAAGCATCCAGTACTGCTA  450

seq1  GATGCAACAATGTGGCTGGCTTCACATCACCTTTTAATCTCCTTCCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACAATGTGGCTGGCTTCACATCACCTTTTAATCTCCTTCCCCTT  500

seq1  CTCTTAGAGCTTTTTGTAATTCTTACCCCCACCCCCACCCCCCCACCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGAGCTTTTTGTAATTCTTACCCCCACCCCCACCCCCCCACCCTG  550

seq1  AGACAGTGTTTCTCTGTGTAGCCCTAGCTGTCCTGGAACTCTCTCTG-TT  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGACAGTGTTTCTCTGTGTAGCCCTAGCTGTCCTGGAACTCTCTCTGTTT  600

seq1  TAAC-TTTAAACTCAGAGACCCACCTGCTACTGCTATGTCCTGAGCACTG  648
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTAAACTCAGAGACCCACCTGCTACTGCTATGTCCTGAGCACTG  650

seq1  GGACAAAGGTGAGCACCACCACGGTCTGGCTCAACCTCGTTC-TTTTGAT  697
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGACAAAGGTGAGCACCACCACGGTCTGGCTCAACCTCGTTCTTTTTGAT  700

seq1  GAGTCTGGGTTGTCTCAGTGCCACATTCTTCTCTGCTGAGTTG-CCTTCG  746
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  GAGTCTGGGTTGTCTCAGTGCCACATTCATCTCTGCTGAGTTGCCCTTCG  750

seq1  CCTGG  751
      |||||
seq2  CCTGG  755

seq1: chr12_112935617_112936078
seq2: B6Ng01-014P19.g_68_529 (reverse)

seq1  TTCCCCCCCCCCCCCTGAGACATTGCTCCAGCCCCACACCCTCATGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCCCCCCCCCTGAGACATTGCTCCAGCCCCACACCCTCATGGCCC  50

seq1  ATTCTTGGGAAATGACAAGATGCCCCTTGGCGTGCCTGTGCCTACAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGGGAAATGACAAGATGCCCCTTGGCGTGCCTGTGCCTACAGTCT  100

seq1  GAAGTCCAGGGATCCAGCTCTGCAGATTCTTAATGAGCCTGGAGGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCAGGGATCCAGCTCTGCAGATTCTTAATGAGCCTGGAGGCTTTT  150

seq1  TGCACTGGCTGTTCTCATCGCCTGCTTGTCCCTGCCGAGGCTCTCACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGCTGTTCTCATCGCCTGCTTGTCCCTGCCGAGGCTCTCACATG  200

seq1  GCCCTGGCCTTAGGTCCCTTCCAGTAACCATGTCAGTTCTGGGATGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCCTTAGGTCCCTTCCAGTAACCATGTCAGTTCTGGGATGTCTG  250

seq1  CTTTTTCTTTGGTCAGGAGTAAGAGTCAAAAGATGACCTTCCGTGGACGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTGGTCAGGAGTAAGAGTCAAAAGATGACCTTCCGTGGACGG  300

seq1  ATGGAAACTGCAGTATCAGAAGAAAAAGGGGACCATGCATCCGAGCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAACTGCAGTATCAGAAGAAAAAGGGGACCATGCATCCGAGCACAA  350

seq1  GGGGCACTGGGAGCCTGCTCAGCCAGCTGATAGACAGGATAGACCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACTGGGAGCCTGCTCAGCCAGCTGATAGACAGGATAGACCAGGAC  400

seq1  TGGGCTCAGGCTGCAGAGAAGTAGAGTGCTTGGCTCTCTGGGCTCACGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCAGGCTGCAGAGAAGTAGAGTGCTTGGCTCTCTGGGCTCACGTG  450

seq1  CCATGAGAATTC  462
      ||||||||||||
seq2  CCATGAGAATTC  462