BAC Information

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BAC

Clone NameB6Ng01-016L08
Chromosome12 (Build37)
Map Location 14,888,605 - 15,033,216
singlet/doubletdoublet
Overlap geneLOC668492
Upstream geneAW125753, LOC100043256, Map1lc3-ps7
Downstream geneLOC100042426, LOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016L08.bB6Ng01-016L08.g
ACCDH850595DH850596
length1,0411,006
definitionDH850595|Mus musculus domesticus DNA, BAC clone: B6Ng01-016L08, 5' end.DH850596|Mus musculus domesticus DNA, BAC clone: B6Ng01-016L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,032,681 - 15,033,216)(14,888,605 - 14,889,619)
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggactaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctccttcagggaaggtgtacagttatct
ggtgtttggaccccctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagc
tgaggatggcgctgcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaagatggcgccgcccagaagctctgcgactctcg
cccgtcccagaaacggctggcactctgtattccacacggtcacccgtgca
gcctgccctccgcggagtcccggagccaagaaggctcccgcaggcgcctg
tgccacaaacctctcaggccgggcagacccccgtgctctcaccaggaagg
tggccggctgtctggagctgaagatggcgccgcccagaagctctgcgact
ctcgcccgtcccagaaacggctggcactctgtattccacacggtcacccg
tgcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcg
cctgtgccacaaacctctcagccaggcagacccccgtgctctcaccagga
agtggccggctgtctggagctgaagatggcgccgcccagaagctctgcga
ctcttccaggatgacttttcattatgtgcagagctcacataagaatatgt
atttgtccattctcagactgcaaaccctatttgtatttgtc
gaattcacatgtagtaattgatatcccccatacattacgtgaccatttta
atggatcctagaattcaattggcttcattatttcacaattaggaaacatt
aagatgtcaataactccaaagaacagtaagtccttggattacaatcacag
tacaatatatacatatatatatatatatatatatatatatatatatatat
atatattcctaacattgtatttaaatagacaagttttataaatcaaagat
tagcaatctgttaggaagaaaagagtatgcattttacttgtggcttcaaa
atcttacagagaatgcagccttcttgttgcctgaacttatttctatgtta
ctgcataagaaatatgaggttttagagtttcattgtcaaaaccaatcaga
ttttgaagattatttattcagttcaggaatttgtcttctcttctgttaca
tctgcatttactaaattttctctttacctcttttaaaacctgaaaatcac
accagggaagatagatgagtagttaagaaatactttctgtttatgcagag
gacctgcatttcgtttccagagcccatatggcaacttatagcccatctct
agcaccagttccagggcatccaatacctcttctggcttccataagcacca
ggcatgtacgtggtacatatacacatatgcagacaaaaaaaaaaacatat
aaaatcaaaataattatcaaaaaaggaagaactaaagtgtcatagagaac
tgagcttagatttgtgtatttcaaatgtattttaacataaatgttaagca
cattactttttttctctgggttccatacttgtctttgaggaatgtagggc
tatgtatgtttgtgtgctatgtgtgtctctgcagacacgtcaggccctga
ctgtttattctgatactaagaggaccatgggtagtttcatggactcacgg
gtcatctaatcatactagcaacagggatcgaaatgtcactgctcttgtta
cttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15032681_15033216
seq2: B6Ng01-016L08.b_553_1087 (reverse)

seq1  GACAAATACAAAATAGGGTTTGCAGTCTGAGAATGGAC-AATACATATTC  49
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  GACAAATAC-AAATAGGGTTTGCAGTCTGAGAATGGACAAATACATATTC  49

seq1  TTATGTGAGCTCTGCACATAATGAAAAGTCATCCTGG-AGAGTCGCAGAG  98
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTATGTGAGCTCTGCACATAATGAAAAGTCATCCTGGAAGAGTCGCAGAG  99

seq1  CTTCTGGGCGGCGCCATCTTCAGCTCCAGACAGCCGGCCACCTTCCTGGT  148
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTCTGGGCGGCGCCATCTTCAGCTCCAGACAGCCGGCCA-CTTCCTGGT  148

seq1  GAGAGCACGGGGGTCTGCCTGGCCTGAGAGGTTTGTGGCACAGGCGCCGG  198
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGAGCACGGGGGTCTGCCTGG-CTGAGAGGTTTGTGGCACAGGCGCCGG  197

seq1  CGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGCTGCACGGGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGCTGCACGGGTG  247

seq1  ACCGTGTGGAATACAGAGTGCCAGCCGTTTCTGGGACGGGCGAGAGTCGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGTGGAATACAGAGTGCCAGCCGTTTCTGGGACGGGCGAGAGTCGC  297

seq1  AGAGCTTCTGGGCGGCGCCATCTTCAGCTCCAGACAGCCGGCCACCTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCTGGGCGGCGCCATCTTCAGCTCCAGACAGCCGGCCACCTTCC  347

seq1  TGGTGAGAGCACGGGGGTCTGCCCGGCCTGAGAGGTTTGTGGCACAGGCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGAGCACGGGGGTCTGCCCGGCCTGAGAGGTTTGTGGCACAGGCG  397

seq1  CCTGCGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGCTGCACG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGGGAGCCTTCTTGGCTCCGGGACTCCGCGGAGGGCAGGCTGCACG  447

seq1  GGTGACCGTGTGGAATACAGAGTGCCAGCCGTTTCTGGGACGGGCGAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCGTGTGGAATACAGAGTGCCAGCCGTTTCTGGGACGGGCGAGAG  497

seq1  TCGCAGAGCTTCTGGGCGGCGCCATCTTCAGCTCCAGA  536
      ||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGAGCTTCTGGGCGGCGCCATCTTCAGCTCCAGA  535

seq1: chr12_14888605_14889619
seq2: B6Ng01-016L08.g_65_1070

seq1  GAATTCACATGTAGTAATTGATATCCCCCATACATTACGTGACCATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGTAGTAATTGATATCCCCCATACATTACGTGACCATTTTA  50

seq1  ATGGATCCTAGAATTCAATTGGCTTCATTATTTCACAATTAGGAAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCCTAGAATTCAATTGGCTTCATTATTTCACAATTAGGAAACATT  100

seq1  AAGATGTCAATAACTCCAAAGAACAGTAAGTCCTTGGATTACAATCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCAATAACTCCAAAGAACAGTAAGTCCTTGGATTACAATCACAG  150

seq1  TACAATATATACATATATATATATATATATATATATATATATATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATATACATATATATATATATATATATATATATATATATATATAT  200

seq1  ATATATTCCTAACATTGTATTTAAATAGACAAGTTTTATAAATCAAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCCTAACATTGTATTTAAATAGACAAGTTTTATAAATCAAAGAT  250

seq1  TAGCAATCTGTTAGGAAGAAAAGAGTATGCATTTTACTTGTGGCTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCTGTTAGGAAGAAAAGAGTATGCATTTTACTTGTGGCTTCAAA  300

seq1  ATCTTACAGAGAATGCAGCCTTCTTGTTGCCTGAACTTATTTCTATGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAGAGAATGCAGCCTTCTTGTTGCCTGAACTTATTTCTATGTTA  350

seq1  CTGCATAAGAAATATGAGGTTTTAGAGTTTCATTGTCAAAACCAATCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAAGAAATATGAGGTTTTAGAGTTTCATTGTCAAAACCAATCAGA  400

seq1  TTTTGAAGATTATTTATTCAGTTCAGGAATTTGTCTTCTCTTCTGTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGATTATTTATTCAGTTCAGGAATTTGTCTTCTCTTCTGTTACA  450

seq1  TCTGCATTTACTAAATTTTCTCTTTACCTCTTTTAAAACCTGAAAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTTACTAAATTTTCTCTTTACCTCTTTTAAAACCTGAAAATCAC  500

seq1  ACCAGGGAAGATAGATGAGTAGTTAAGAAATACTTTCTGTTTATGCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAAGATAGATGAGTAGTTAAGAAATACTTTCTGTTTATGCAGAG  550

seq1  GACCTGCATTTCGTTTCCAGAGCCCATATGGCAACTTATAGCCCATCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCATTTCGTTTCCAGAGCCCATATGGCAACTTATAGCCCATCTCT  600

seq1  AGCACCAGTTCCAGGGCATCCAATACCTCTTCTGGCTTCCATAAGCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAGTTCCAGGGCATCCAATACCTCTTCTGGCTTCCATAAGCACCA  650

seq1  GGCATGTACGTGGTACATATACACATATGCAGACAAAAAAAAAAACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTACGTGGTACATATACACATATGCAGACAAAAAAAAAAACATAT  700

seq1  AAAATCAAAATAATTATCAAAAAAGGAAGAACTAAAGTGTCATAGAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAATAATTATCAAAAAAGGAAGAACTAAAGTGTCATAGAGAAC  750

seq1  TGAGCTTAGATTTGTGTATTTCAAATGTATTTTAACATAAATGTTAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTAGATTTGTGTATTTCAAATGTATTTTAACATAAATGTTAAGCA  800

seq1  CATTACTTTTTTTCTCT-GGTTCCATACTTGTC-TTGAGGAATGTAGGGC  848
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  CATTACTTTTTTTCTCTGGGTTCCATACTTGTCTTTGAGGAATGTAGGGC  850

seq1  TATGTATGTTTGTGTGCTATGTGTGTCTCTGCAGACAACGTCAGGCCCTT  898
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  TATGTATGTTTGTGTGCTATGTGTGTCTCTGCAGAC-ACGTCAGGCCC-T  898

seq1  GACTGTTTAATTCTGATAGCTAAGAGGAACCATGGGTAGTTTCATGGACT  948
      |||||||| ||||||||| |||||||| ||||||||||||||||||||||
seq2  GACTGTTT-ATTCTGATA-CTAAGAGG-ACCATGGGTAGTTTCATGGACT  945

seq1  CACGGGGTCATCTAATCATTACTAGCCACCAGGGATTCAGAAATGTCACT  998
      ||| |||||||||||||| |||||| || |||||||   |||||||||||
seq2  CAC-GGGTCATCTAATCA-TACTAG-CAACAGGGAT--CGAAATGTCACT  990

seq1  GCTCTTGTTTACTTATT  1015
      ||||||| |||||||||
seq2  GCTCTTG-TTACTTATT  1006