BAC Information

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BAC

Clone NameB6Ng01-016N08
Chromosome12 (Build37)
Map Location 51,295,728 - 51,296,754
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424, LOC665071, LOC665077, LOC100039455
Downstream genePrkcm, LOC100039517, LOC636070
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016N08.bB6Ng01-016N08.g
ACCDH850685DH850686
length1871,027
definitionDH850685|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N08, 5' end.DH850686|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctgagactaaaccaccaaccaaagaaaatgcatggtgagactc
atggctccagctgcatatgtagcagaggatggccttgttgggcatcaatg
ggaggagaggcccttggtcctgtgaaggttctatgccccagcataaggga
atgccaggaccaggaagggggagtgggtgggttggtg
gaattcactagacactaactctcttgtccacccaaattataccagtgccc
acataatgaaaagacattgcaggggctgggttgtatgccttccaggcaga
gctccacagccagcaattagtttatatagtcagaggccaaaaaaccttat
tgtcttactggctgtataattatctgttatgatgaactgtgattctaaga
actattgtcttaaacttggatctgtgtatggattagttgtctggctgaga
cccaagaatggaccttcccttagtgtctctgcctgagtgatttctctggt
ctcttcctggctgggtaaaacagagactgtttctgcatgatttctttggt
tgatgagaagcaattatgccttaaatgaagtcattcatgtctgccatttt
gtttgcatattttccagtgttcacctgttattaaacctgtctttaaactg
tgagcgagcttcaagtagacttttgtgtataacacagttcggtaatcaga
ggaaaacaaaatagataaaatgttttctgcacaaatcactcaagcaagaa
atctaataaagtgattaaaatctaaaatagcatttaagaatttcctggga
atttttatttcttggacctaccccacccccatccacattctatggaagat
ggcaactgtcttagctgtttcagtgtgaaagttattaccccactgttaac
taacaggagagaaaaaacacacaggaaagagggagtcttaatatagctta
tcattattgtcaaaatagttggtgcagttctttacaatgatatattgaca
tttgcacaaaagactgcaagaagggaattatgtaaaactagttatattta
tgaatgagttctttataattatgaattacatatttaaagttcatataata
taagaggcttgctaattaaaagtgtttcttttgaaattgcattcccaaaa
gtctttcagggctggaatcatcaacaaacaaaccctaaactaccagtttt
tcctaatcactggtttccttccataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_51295728_51296754
seq2: B6Ng01-016N08.g_64_1090

seq1  GAATTCACTAGACACTAACTCTCTTGTCCACCCAAATTATACCAGTGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGACACTAACTCTCTTGTCCACCCAAATTATACCAGTGCCC  50

seq1  ACATAATGAAAAGACATTGCAGGGGCTGGGTTGTATGCCTTCCAGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGAAAAGACATTGCAGGGGCTGGGTTGTATGCCTTCCAGGCAGA  100

seq1  GCTCCACAGCCAGCAATTAGTTTATATAGTCAGAGGCCAAAAAACCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACAGCCAGCAATTAGTTTATATAGTCAGAGGCCAAAAAACCTTAT  150

seq1  TGTCTTACTGGCTGTATAATTATCTGTTATGATGAACTGTGATTCTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTACTGGCTGTATAATTATCTGTTATGATGAACTGTGATTCTAAGA  200

seq1  ACTATTGTCTTAAACTTGGATCTGTGTATGGATTAGTTGTCTGGCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGTCTTAAACTTGGATCTGTGTATGGATTAGTTGTCTGGCTGAGA  250

seq1  CCCAAGAATGGACCTTCCCTTAGTGTCTCTGCCTGAGTGATTTCTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAATGGACCTTCCCTTAGTGTCTCTGCCTGAGTGATTTCTCTGGT  300

seq1  CTCTTCCTGGCTGGGTAAAACAGAGACTGTTTCTGCATGATTTCTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTGGCTGGGTAAAACAGAGACTGTTTCTGCATGATTTCTTTGGT  350

seq1  TGATGAGAAGCAATTATGCCTTAAATGAAGTCATTCATGTCTGCCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGAAGCAATTATGCCTTAAATGAAGTCATTCATGTCTGCCATTTT  400

seq1  GTTTGCATATTTTCCAGTGTTCACCTGTTATTAAACCTGTCTTTAAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATATTTTCCAGTGTTCACCTGTTATTAAACCTGTCTTTAAACTG  450

seq1  TGAGCGAGCTTCAAGTAGACTTTTGTGTATAACACAGTTCGGTAATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGAGCTTCAAGTAGACTTTTGTGTATAACACAGTTCGGTAATCAGA  500

seq1  GGAAAACAAAATAGATAAAATGTTTTCTGCACAAATCACTCAAGCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAAAATAGATAAAATGTTTTCTGCACAAATCACTCAAGCAAGAA  550

seq1  ATCTAATAAAGTGATTAAAATCTAAAATAGCATTTAAGAATTTCCTGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATAAAGTGATTAAAATCTAAAATAGCATTTAAGAATTTCCTGGGA  600

seq1  ATTTTTATTTCTTGGACCTACCCCACCCCCATCCACATTCTATGGAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTCTTGGACCTACCCCACCCCCATCCACATTCTATGGAAGAT  650

seq1  GGCAACTGTCTTAGCTGTTTCAGTGTGAAAGTTATTACCCCACTGTTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTGTCTTAGCTGTTTCAGTGTGAAAGTTATTACCCCACTGTTAAC  700

seq1  TAACAGGAGAGAAAAAACACACAGGAAAGAGGGAGTCTTAATATAGCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGAGAGAAAAAACACACAGGAAAGAGGGAGTCTTAATATAGCTTA  750

seq1  TCATTATTGTCAAAATAGTTGGTGCAGTTCTTTACAATGATATATTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTGTCAAAATAGTTGGTGCAGTTCTTTACAATGATATATTGACA  800

seq1  TTTGCACAAAAGACTGCAAGAA-GGAATTATGTAAAACTAGTTATATTTA  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTGCACAAAAGACTGCAAGAAGGGAATTATGTAAAACTAGTTATATTTA  850

seq1  TGAATGAGTTCATTATAAATTATGAATTACATATTTAAAGGTCATATAAC  899
      ||||||||||| |||| ||||||||||||||||||||||| |||||||| 
seq2  TGAATGAGTTCTTTAT-AATTATGAATTACATATTTAAAGTTCATATAAT  899

seq1  ATAAGAGGCTTGCTAATTAAAAGTGTATTCTATTGAAATTGCAATCACCA  949
      |||||||||||||||||||||||||| |||| ||||||||||| || |||
seq2  ATAAGAGGCTTGCTAATTAAAAGTGT-TTCTTTTGAAATTGCATTC-CCA  947

seq1  AAAGTCATTCAGGGCTGG-ATCAGTCAACAAACAAA-CCTAAACTACCAG  997
      |||||| ||||||||||| |||| |||||||||||| |||||||||||||
seq2  AAAGTCTTTCAGGGCTGGAATCA-TCAACAAACAAACCCTAAACTACCAG  996

seq1  TTTTTCTAAGTCACT-GTTTCCTTCCATAGA  1027
      ||||||  | ||||| ||||||||||||| |
seq2  TTTTTCCTAATCACTGGTTTCCTTCCATAAA  1027