BAC Information

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BAC

Clone NameB6Ng01-017B05
Chromosome12 (Build37)
Map Location 21,978,495 - 21,979,012
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693
Downstream geneEG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017B05.bB6Ng01-017B05.g
ACCDH850859DH850860
length1,259512
definitionDH850859|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B05, 5' end.DH850860|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccctttatatccctcacagagcgacactggtcagctctatga
taacccttgccacacttagagcaaagagtgagagtccctccctgtttatc
tggagctctgcaatctttcttaaaatgcccaggctttccgcagttaaaac
atgtcctctgattatttctgcccatggagcggttctgagattgaaggatg
gcagccgctaaacctgcattgctgagaggtcccccaagctctcgacagac
cctgagccagtcttgtaagcctttgttctttcttggggctatggccgctc
ggcactcctttgtggcttgctcataaattagctgttctatgagaggcgca
gcttgctctgactctccaaaaatacgctctgctgcctctgtcattctggc
cacaaaatctgagaaagattcctgaggtccctggattatctttgttaact
gcccagtggtttcacctgctcgagagagcgccttccaggccctaatagcc
gtggaagaaatctgggcataggctccccaatggtagtttgtctgatcagc
agaataagctccctgacccgttaacaagtcaaaagtccaatctctctgct
ctggagtcaaagcagctgcgtttgctcgggcctgcgcttgggcagcttcg
tgccaaagcgctctccattccatatatttgcccatactagggagagcggc
ttttacaaccgtctgccaatcagcaggagttagtgccataccagcgagcc
tgtctaactgcaccaaggtaaaattagcattggttccgtatttacggacc
gactcggcaatttctttaatttgtacatattctaccggagcgtggacacg
cccaccctcggctccttcaaagaccggaaatgcctgttgtatttcttttg
ttcctctcggggaatggaatgagtctgcgcactgcctctctgcgtactgc
ctctctgcgcatctccctgcgcactgctctctgcgcatcttccttgcgca
ctgctctctgcgcatcttctctggcgcattgccttcttttgcgcatgctg
acgcactacgcagggcggtacctccccataggcggaacttgaagccgact
gccgggaggtggaacagtacgcttgcttcgcccagcgcctctttagcttt
tttcttgaccattactggctggtaaggcctgctcttttcttctgactgtt
ttcactgagagaatccttcacgatgcgctcctgaactatcttaagagcga
gcgtgtctc
ccaagataataagactaagctggcacactaaacctcatagaagcaaaaat
ctatgttctgtgtttttccccatcagttccttagaaagcagatcccttgg
gatgatagaaagggaaagtgggttctttgcttttctgttgctataacccc
tcaccaaaaacaactcatggaatacagggttcgttttagctcatagctat
tgtgggatataagtctctcatgacaggaaggcacagcagcaagtgatagg
tatagagggaggaagaggaggttgaaagatctcatattcaactccattca
gaaagaggacaagagcaaaaggggaagtggggaacatttataaactctgg
aagcccacccttatgctatgcttgctccagcaaagctatacctcctgaac
ttcctctgactgcaccaccaactggagatttgctgtttaaatccctgagc
ctttaggacagtggttctcaacccgagggcggccacccctgctggggagt
cacatgaccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21978495_21979012
seq2: B6Ng01-017B05.g_67_584

seq1  GAATTCCCAAGATAATAAGACTAAGCTGGCACACTAAACCTCATAGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGATAATAAGACTAAGCTGGCACACTAAACCTCATAGAAGC  50

seq1  AAAAATCTATGTTCTGTGTTTTTCCCCATCAGTTCCTTAGAAAGCAGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTATGTTCTGTGTTTTTCCCCATCAGTTCCTTAGAAAGCAGATC  100

seq1  CCTTGGGATGATAGAAAGGGAAAGTGGGTTCTTTGCTTTTCTGTTGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGATGATAGAAAGGGAAAGTGGGTTCTTTGCTTTTCTGTTGCTAT  150

seq1  AACCCCTCACCAAAAACAACTCATGGAATACAGGGTTCATTTTAGCTCAT  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACCCCTCACCAAAAACAACTCATGGAATACAGGGTTCGTTTTAGCTCAT  200

seq1  AGCTACTGTGGGATACAAGTCTCTCATGACAGGAAGGCACAGCAGCAAGT  250
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCTATTGTGGGATATAAGTCTCTCATGACAGGAAGGCACAGCAGCAAGT  250

seq1  GATAGGTATAGAGGGAGGAAGAGGAGGTTGAAAGATCTCATATTCAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTATAGAGGGAGGAAGAGGAGGTTGAAAGATCTCATATTCAACTC  300

seq1  CATTCAGAAAGAGGACAAGAGCAAACGGGGAAGTGGGGAACATTTATAAA  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CATTCAGAAAGAGGACAAGAGCAAAAGGGGAAGTGGGGAACATTTATAAA  350

seq1  CTCTGGAAGCCCACCCTTATGCTATGCTTGCTCCAGCAAAGCTATACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAGCCCACCCTTATGCTATGCTTGCTCCAGCAAAGCTATACCTC  400

seq1  CTGAACTTCCTCTGACAGCACCACCAACTGGAGATTTGCTGTTTAAATCC  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTGAACTTCCTCTGACTGCACCACCAACTGGAGATTTGCTGTTTAAATCC  450

seq1  CTGAGCCTTTAGGGCAGTGGTTCTCAACCCGTGGGTGGCGACCCCTGGTG  500
      ||||||||||||| ||||||||||||||||| ||| ||| ||||||| ||
seq2  CTGAGCCTTTAGGACAGTGGTTCTCAACCCGAGGGCGGCCACCCCTGCTG  500

seq1  GGGAGTCACATGACCTTT  518
      ||||||||||||||||||
seq2  GGGAGTCACATGACCTTT  518