BAC Information

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BAC

Clone NameB6Ng01-017I21
Chromosome12 (Build37)
Map Location 39,516,260 - 39,517,346
singlet/doubletsinglet
Overlap geneEtv1
Upstream geneLOC100043139, Dgkb, LOC668824, LOC100043142
Downstream geneLOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017I21.bB6Ng01-017I21.g
ACCDH851207DH851208
length2811,069
definitionDH851207|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I21, 5' end.DH851208|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tagggacttttcagagtccctatataaatactagagccccaacagaaggg
tctcattgaccagttggtgtttggatgccattagttgtgatttatcaagc
atttttgcacaatgagatgagaagaaattgggtatcctgatggcaaagat
caaacttgctccaagaaacttgatgttcctaattagcatgaggtagtcta
atggtattgttgcctccttccccttctagccctctttctctactatccag
tgttcagggatgggaagggtgggatggggtg

gaattccaagataactaggatctacacaaagtaacaacaacaaaacaaaa
caaaaacaaaaaagctaaacagatataaatattgaggtgcaaaatatgct
tttgacaagccaacatttggggctggagagatggctcagggatgaagagc
actggctatgcttccagaggacccaggttcaattcctagcaccccacctg
ctggcttacatcatctctaaacctagttccaagggatctgatatttgagg
gaattaggcagacccatggttcacagataaatattcagcctaagtaccta
tacatacaaaataataagataattttatatttaaaatgaacttgccttcc
agtgtggtagcacaaagcagacaaatgcaataaaataataaaacataatt
taaataatctaatgataatataatgcttgtttatacaaatggttaaaaat
aggtagtgagttatctgcaacttaatatgctggtatagatacgcttttgg
aaagacttttcctcagtctcgtaagccagagttgcagctccatagaacac
atcgccacatgagtagcggcaagaaaggctccagtgggtgtgcgacatgt
gttgggcgttggcatatgtgtggggtgagggaaaacatctaatgggcaga
gaaatctagaaggtgtacctcatcagtacggagaaaatagctccctacta
acaatttgtaaaaggagtaaggacgaaagagtgctatttctgttctaact
ccttaacatactgaataagtacttcacacttatgcttgacatattacaga
atcttacaaaaaacatatgactcacattttcacagaagctaatcttaaga
aactgaatagactgagcgaagcagtgctctatttaaattgacaaaggctc
agtctacctcgaacttgaagctggaggagagaaaccatttaactcaaaca
cagttggaatttgggcagaaaatatgacacagatccccacacttgtatct
tacattttttccttatttcaaagaattctttgagaagtaactacgctgct
gaaatctgtgagcatacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39516260_39517346
seq2: B6Ng01-017I21.g_68_1136 (reverse)

seq1  TGGTATGGCTTGCAACAGTATTTCAGGCAGCTGTAGTTTACTTCTTCATA  50
      |||||| |||    |||| |||||| ||||| |||| ||||||| ||| |
seq2  TGGTAT-GCT---CACAG-ATTTCA-GCAGC-GTAG-TTACTTC-TCAAA  41

seq1  GAATTCTTGTGAATTAAAGAAAAAAATGTAGGATACAAGTGTGGGGATCT  100
      |||||||| |||| | ||| |||||||||| |||||||||||||||||||
seq2  GAATTCTT-TGAAAT-AAGGAAAAAATGTAAGATACAAGTGTGGGGATCT  89

seq1  GTGTCATATTTTCCTTGCCCAAA-TCCAACTTGTGTTTTGAGTTAAATGG  149
      |||||||||||||  |||||||| |||||| |||| ||||||||||||||
seq2  GTGTCATATTTTC--TGCCCAAATTCCAAC-TGTG-TTTGAGTTAAATGG  135

seq1  TTTCCTTCTCCTCCAGCTTCAAGTTCGAGGTAGACTTGAGCCTTTGTCAA  199
      ||||  ||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTC--TCTCCTCCAGCTTCAAGTTCGAGGTAGAC-TGAGCCTTTGTCAA  182

seq1  TTTAAATAGAGCACTGCTTCGCTCAGTCTATTCAGTTTCTTAAGATTAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAGAGCACTGCTTCGCTCAGTCTATTCAGTTTCTTAAGATTAGC  232

seq1  TTCTGTGAAAATGTGAGTCATATGTTTTTTGTTAAGATTCTGTAATATGT  299
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  TTCTGTGAAAATGTGAGTCATATGTTTTTTG-TAAGATTCTGTAATATG-  280

seq1  TCAAGCATAAGTGTGAAGTACTTATTCAGTATGTTAAGGAGTTAGAACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATAAGTGTGAAGTACTTATTCAGTATGTTAAGGAGTTAGAACAG  330

seq1  AAATAGCACTC-TTCGTCCTTACTCCTTTTACAAATTGTTAGTAGGGAGC  398
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCACTCTTTCGTCCTTACTCCTTTTACAAATTGTTAGTAGGGAGC  380

seq1  TATTTTCTCCGTACTGATGAGGTACACCTTCTAGATTTCTCTGCCCATTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTCCGTACTGATGAGGTACACCTTCTAGATTTCTCTGCCCATTA  430

seq1  GATGTTTTCCCTCACCCCACACATATGCCAACGCCCAACACATGTCGCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTCCCTCACCCCACACATATGCCAACGCCCAACACATGTCGCAC  480

seq1  ACCCACTGGAGCCTTTCTTGCCGCTACTCATGTGGCGATGTGTTCTATGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTGGAGCCTTTCTTGCCGCTACTCATGTGGCGATGTGTTCTATGG  530

seq1  AGCTGCAACTCTGGCTTACGAGACTGAGGAAAAGTCTTTCCAAAAGCGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAACTCTGGCTTACGAGACTGAGGAAAAGTCTTTCCAAAAGCGTA  580

seq1  TCTATACCAGCATATTAAGTTGCAGATAACTCACTACCTATTTTTAACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACCAGCATATTAAGTTGCAGATAACTCACTACCTATTTTTAACCA  630

seq1  TTTGTATAAACAAGCATTATATTATCATTAGATTATTTAAATTATGTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAAACAAGCATTATATTATCATTAGATTATTTAAATTATGTTTT  680

seq1  ATTATTTTATTGCATTTGTCTGCTTTGTGCTACCACACTGGAAGGCAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATTGCATTTGTCTGCTTTGTGCTACCACACTGGAAGGCAAGT  730

seq1  TCATTTTAAATATAAAATTATCTTATTATTTTGTATGTATAGGTACTTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAAATATAAAATTATCTTATTATTTTGTATGTATAGGTACTTAG  780

seq1  GCTGAATATTTATCTGTGAACCATGGGTCTGCCTAATTCCCTCAAATATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATATTTATCTGTGAACCATGGGTCTGCCTAATTCCCTCAAATATC  830

seq1  AGATCCCTTGGAACTAGGTTTAGAGATGATGTAAGCCAGCAGGTGGGGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCTTGGAACTAGGTTTAGAGATGATGTAAGCCAGCAGGTGGGGTG  880

seq1  CTAGGAATTGAACCTGGGTCCTCTGGAAGCATAGCCAGTGCTCTTCATCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATTGAACCTGGGTCCTCTGGAAGCATAGCCAGTGCTCTTCATCC  930

seq1  CTGAGCCATCTCTCCAGCCCCAAATGTTGGCTTGTCAAAAGCATATTTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCATCTCTCCAGCCCCAAATGTTGGCTTGTCAAAAGCATATTTTG  980

seq1  CACCTCAATATTTATATCTGTTTAGCTTTTTTGTTTTTGTTTTGTTTTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCAATATTTATATCTGTTTAGCTTTTTTGTTTTTGTTTTGTTTTGT  1030

seq1  TGTTGTTACTTTGTGTAGATCCTAGTTATCTTGGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTACTTTGTGTAGATCCTAGTTATCTTGGAATTC  1069


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