BAC Information

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BAC

Clone NameB6Ng01-018B24
Chromosome12 (Build37)
Map Location 63,747,168 - 63,748,368
singlet/doubletsinglet
Overlap genenone
Upstream geneLrfn5, LOC665707, LOC100040403, LOC665713, LOC622746, LOC100040438
Downstream gene1700047L15Rik, Tspyl-ps, EG665741, EG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018B24.bB6Ng01-018B24.g
ACCDH851614DH851615
length1,1941,161
definitionDH851614|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B24, 5' end.DH851615|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttacatggaaatgttctcgattcagttcattacacagaaggtt
ttatgcttactactcctactgcaaaacacacacacacacacacacacaca
cacacacacacacacacaaacactgccacaaaagatcaaccagggacagc
ggccacaattttgtagttcattgcaatgaaaattaaatgggactctaaga
ggaaaaaaaaaaacaaataaaacgatagcaggacatacagtaaaatatta
cagaggaatgattacagtgagcagaggaagtcgtgagtgtgagtagttcc
gagtagtatgtaccgttgatttgtactgaccatgtcaagtacactagcct
cagacccatgagaaaatgtcaaaattacacccatccccaactcaaatgag
gctgcatgggaaatgacagtcttctctgtggcttcagtgcagatagtaac
aatggatgcaaaaaatgtcccctataacttcactcttaaaaccccagatc
tgtggtagactgaactttactcccctatagagactgttgtcacaaagatt
atataaatatttctatataaaatgaaacttggagtattatccagggctgt
catcactcagggttttctccaggacaaactatttcttacgtgctttgaga
actgtttcttttatggacataaaacagaggtgcatgttttaatgattttg
aaatagtataaatttattgcactgttccctgttattttttattttattaa
aattagagggtttttttccatataatacaccttatctatggttttccctc
tttccaatcatctgagattctccccattttctttcctttctagatccatt
tctgtttgtctcatagggggaaaatgtcagacatgtaaataataatgtaa
aataggataaacaaaccagacataggacatacagcaaacagaagctaaca
aaatacagaaacacatacagatgcagacacacacaggattttatatacag
gatctcataaacacccaaaatcagaaaaacataatatatattcaaaggac
ttgtatgttaagacttaacaggtaaaacaaattggcccggaaagaagcgg
tatgtgagacaaggagaaactaggatccattggtgtaggtttggaatggc
agctactggctggacatgggtcttgcctgtgggaccagcttaag
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaactcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaatgaatgaatttatgaagttcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtattcactgataagtgtatattagccccaaacct
aggatacccaagatataagatataatttgttaaacacatgaaactcaaga
agaatgaagactggaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatgttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tgagagctagagaaagtagccaagagctaaagggatcttcacccttatag
gtggacacattatgactaccagtaccccggagctctgactcctagctgca
tatatatcaaaagatgctagtcggccatcactggaaagagagtcatgact
gcaacttaattgccagtacaggtacacaggccaaaggggaaatagttggg
tccaagtgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_63747168_63748368
seq2: B6Ng01-018B24.b_41_1234 (reverse)

seq1  CTTAAGCTGGGTTTCTCACAGGGCAGACCCCATGCTCAG-CAGTAGACTG  49
      ||||||||||   || ||||||  ||| ||||||  ||| |||||| |||
seq2  CTTAAGCTGG---TCCCACAGGCAAGA-CCCATGTCCAGCCAGTAG-CTG  45

seq1  CCATTACAAAACTAACACAATGGAATCTTTGGTGTCTCTTTGTCT--CAT  97
      ||||| |||| |||   |||||||  |  | || |||| ||||||  |||
seq2  CCATTCCAAACCTACACCAATGGATCC--TAGTTTCTCCTTGTCTCACAT  93

seq1  ACCGCTTCTT--CGGGGCAATTTTGTTTACTTGTTTAGTCTT-ACATACA  144
      ||||||||||  |||| ||||||  ||||| |||| |||||| |||||||
seq2  ACCGCTTCTTTCCGGGCCAATTTGTTTTACCTGTTAAGTCTTAACATACA  143

seq1  AGTCCTTTGAATATATATTATG-TTTTCTGATTTTGTGTGTTTATGAGAT  193
      |||||||||||||||||||||| ||||||||||||| |||||||||||| 
seq2  AGTCCTTTGAATATATATTATGTTTTTCTGATTTTGGGTGTTTATGAGA-  192

seq1  TCCTGTATATAAAATCCTGTGTGTGTCTGCATCTGTATGTGTTTCTTGTA  243
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCTGTATATAAAATCCTGTGTGTGTCTGCATCTGTATGTGTTTC-TGTA  241

seq1  TTTTTGTTAGCTTCTGTTTGCTTGTATTGTCCTATTGTCTGGTTTGTTTT  293
       |||||||||||||||||||| |||| ||||||| ||||||||||| |||
seq2  -TTTTGTTAGCTTCTGTTTGC-TGTA-TGTCCTA-TGTCTGGTTTG-TTT  286

seq1  ATCCTATTTTACATTATTATTTACATGTCTGACATTTTCCCCCTATGAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTTTACATTATTATTTACATGTCTGACATTTTCCCCCTATGAGA  336

seq1  CAAACAGAAATGGATCTAGAAAGGAAAGAAAATGGGGAGAATCTCAGATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAAATGGATCTAGAAAGGAAAGAAAATGGGGAGAATCTCAGATG  386

seq1  ATTGGAAAGAGGGAAAACCATAGATAAGGTGTATTATATGGAAAAAAACC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAAGAGGGAAAACCATAGATAAGGTGTATTATATGGAAAAAAACC  436

seq1  CTCTAATTTTAATAAAATAAAAAATAACAGGGAACAGTGCAATAAATTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTTAATAAAATAAAAAATAACAGGGAACAGTGCAATAAATTTA  486

seq1  TACTATTTCAAAATCATTAAAACATGCACCTCTGTTTTATGTCCATAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTCAAAATCATTAAAACATGCACCTCTGTTTTATGTCCATAAAA  536

seq1  GAAACAGTTCTCAAAGCACGTAAGAAATAGTTTGTCCTGGAGAAAACCCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGTTCTCAAAGCACGTAAGAAATAGTTTGTCCTGGAGAAAACCCT  586

seq1  GAGTGATGACAGCCCTGGATAATACTCCAAGTTTCATTTTATATAGAAAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATGACAGCCCTGGATAATACTCCAAGTTTCATTTTATATAGAAAT  636

seq1  ATTTATATAATCTTTGTGACAACAGTCTCTATAGGGGAGTAAAGTTCAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATAATCTTTGTGACAACAGTCTCTATAGGGGAGTAAAGTTCAGT  686

seq1  CTACCACAGATCTGGGGTTTTAAGAGTGAAGTTATAGGGGACATTTTTTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACAGATCTGGGGTTTTAAGAGTGAAGTTATAGGGGACATTTTTTG  736

seq1  CATCCATTGTTACTATCTGCACTGAAGCCACAGAGAAGACTGTCATTTCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTGTTACTATCTGCACTGAAGCCACAGAGAAGACTGTCATTTCC  786

seq1  CATGCAGCCTCATTTGAGTTGGGGATGGGTGTAATTTTGACATTTTCTCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGCCTCATTTGAGTTGGGGATGGGTGTAATTTTGACATTTTCTCA  836

seq1  TGGGTCTGAGGCTAGTGTACTTGACATGGTCAGTACAAATCAACGGTACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGAGGCTAGTGTACTTGACATGGTCAGTACAAATCAACGGTACA  886

seq1  TACTACTCGGAACTACTCACACTCACGACTTCCTCTGCTCACTGTAATCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTCGGAACTACTCACACTCACGACTTCCTCTGCTCACTGTAATCA  936

seq1  TTCCTCTGTAATATTTTACTGTATGTCCTGCTATCGTTTTATTTGTTTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTAATATTTTACTGTATGTCCTGCTATCGTTTTATTTGTTTTT  986

seq1  TTTTTTCCTCTTAGAGTCCCATTTAATTTTCATTGCAATGAACTACAAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTCTTAGAGTCCCATTTAATTTTCATTGCAATGAACTACAAAA  1036

seq1  TTGTGGCCGCTGTCCCTGGTTGATCTTTTGTGGCAGTGTTTGTGTGTGTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCCGCTGTCCCTGGTTGATCTTTTGTGGCAGTGTTTGTGTGTGTG  1086

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGCAGTAGGAGTAGT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGCAGTAGGAGTAGT  1136

seq1  AAGCATAAAACCTTCTGTGTAATGAACTGAATCGAGAACATTTCCATGTA  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAAAACCTTCTGTGTAATGAACTGAATCGAGAACATTTCCATGTA  1186

seq1  AAGAATTC  1201
      ||||||||
seq2  AAGAATTC  1194