BAC Information

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BAC

Clone NameB6Ng01-018C09
Chromosome12 (Build37)
Map Location 59,006,903 - 59,007,842
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a21, AU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018C09.bB6Ng01-018C09.g
ACCDH851631DH851632
length1,043965
definitionDH851631|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C09, 5' end.DH851632|Mus musculus domesticus DNA, BAC clone: B6Ng01-018C09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtgaaactgggctataggcaatttgtaatccagcccatcaa
aaaacttacttcctaagaacttgactgaggcagaaggaatgcaaaagcaa
tgaccaaacttgtttggcagaggaaatttcaagacaggacaggattcaga
ctgtggcgtggtgactgactgctcagtgctattgctcagatctatgttaa
gtccagagcttgggggggaaagtaaacatccaattgaaatttaaaaaata
tgtgtttaggaaagaaagaaacacaagcaaaattaaatctgcagacaagg
tagatatggagaaagcaacagcaattgttaaagattgatacctttaaaga
tacaatttgtgctgtgtgcttacacagtaataaaggtacactgaaggcaa
gactccacccaaccaagactcaaatgtctgaaaacacaaattcaattgaa
agcagagaactaaactggcagtgctaccatgtgtattcccttctccaaag
ggactcctagagatgggttgcctcgcaaggtgatgtttctggggtcagcc
ttgaaagcacaatgaggtcactgaagcagtgacccaagggacccaagttg
ctagcagattttggcagtaccagatcttgttgttgttgttgttgttttta
tagatattttcttcatttacactttaaatgctatcccctttactggttcc
ctttccaaaaaccccctatctgctccctcctccccctgctcaccaactca
accactccagcttcctgaccctggaagtcccctatactggggcataaaac
cttcacaagaccaagggcctctcctcccactgatgactgactaggccatc
ctctgctacatatgcagctagagacatgagccccaccatgtgtttttttt
gttttgttttgtttaattggtggtttaggcccagggagctcttgggggta
ctgggtagtcttattgttcctctaaatggctgtgaccccttcgctcctgg
gtcctccctcccttcatgggatctcgtgcccatccatgatggc
gaattccagaaggtgacattgtatgcctctagagtgacaatacatgccac
tgaatgtattgatcttttattcccaaacttttctaaacttactattttag
tttgtttagtttagtgtagtttagtttagtttgtgttttctttgggcttc
attagatttttgtacatataagattatatcttagaacaatacttgaacat
cttagaaagaagcctgtttacttactcttttcaaatctacatacttttat
tccttcactattgaatatgatatagctagagacttttgggggaaggggag
aagagtctcactaggtagcccaagctggtctgattttattatccaacttt
aaaagttgtccttagaataattttaatacctgagttgtaaaagaagttat
aaaatgtccgttttaaataataatcattattctataactttaatttcaaa
tggagtattaggaaaagttatatttcttattattgtgttatatcaaagac
taattttaaaatccattaacccaagtactacataaaagctgtcttcaagg
acaccagaagtgtctgaatgtgtttaccactttttaggatttacccacat
acatggacttcctgtttaaatctaccatctaccaactgtaattatagtaa
aagatttttacagtaatctattattggctcatttggtcagccaagatggc
aaagggcaaggtcatttgatttatgtttgttgggcaacagaaccatgaga
aaagaggacatacagaaattactagaaactctggaacgaggtgactttat
ctcaaatccactatgcgtatatgatgcttctagtcaatctatttaatctt
ctgtattagtccagcagttaaagatatatctaactcgtaaggcagttgta
cattttcatacaacaattgaagcactcagatcactacagttctgctttac
tatggtcttatatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59006903_59007842
seq2: B6Ng01-018C09.g_70_999 (reverse)

seq1  TCTGAGTGCTTTCAATATGTTGTTATGAAAATTGTACAACTGCCTTACGA  50
      ||||||||| |||||| ||||| |||||||| ||||||||||||||||||
seq2  TCTGAGTGC-TTCAAT-TGTTG-TATGAAAA-TGTACAACTGCCTTACGA  46

seq1  GTTAGATATAATCTTTATACTTGCTGGGACTAAATACAGAGATTTAAATA  100
      ||||||||| ||||||| || |||| ||||| ||||||||   |||||||
seq2  GTTAGATAT-ATCTTTA-AC-TGCT-GGACT-AATACAGAAGATTAAATA  91

seq1  GATTGACTAGAAGCATCATATACGCATAGTGGATTTGAGATTAAAGTCAC  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATTGACTAGAAGCATCATATACGCATAGTGGATTTGAGA-TAAAGTCAC  140

seq1  CTCGTTCCAGAGTTTCTAGTAATTTCTGTATGTCCTCTTTTCTCATGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTCCAGAGTTTCTAGTAATTTCTGTATGTCCTCTTTTCTCATGGTT  190

seq1  CTGTTGCCCAACAAACATAAATCAAATGACCTTGCCCTTTGCCATCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCCAACAAACATAAATCAAATGACCTTGCCCTTTGCCATCTTGG  240

seq1  CTGACCAAATGAGCCAATAATAGATTACTGTAAAAATCTTTTACTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAATGAGCCAATAATAGATTACTGTAAAAATCTTTTACTATAAT  290

seq1  TACAGTTGGTAGATGGTAGATTTAAACAGGAAGTCCATGTATGTGGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGTAGATGGTAGATTTAAACAGGAAGTCCATGTATGTGGGTAA  340

seq1  ATCCTAAAAAGTGGTAAACACATTCAGACACTTCTGGTGTCCTTGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAAAAAGTGGTAAACACATTCAGACACTTCTGGTGTCCTTGAAGAC  390

seq1  AGCTTTTATGTAGTACTTGGGTTAATGGATTTTAAAATTAGTCTTTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATGTAGTACTTGGGTTAATGGATTTTAAAATTAGTCTTTGATA  440

seq1  TAACACAATAATAAGAAATATAACTTTTCCTAATACTCCATTTGAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATAATAAGAAATATAACTTTTCCTAATACTCCATTTGAAATTA  490

seq1  AAGTTATAGAATAATGATTATTATTTAAAACGGACATTTTATAACTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATAGAATAATGATTATTATTTAAAACGGACATTTTATAACTTCTT  540

seq1  TTACAACTCAGGTATTAAAATTATTCTAAGGACAACTTTTAAAGTTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTCAGGTATTAAAATTATTCTAAGGACAACTTTTAAAGTTGGAT  590

seq1  AATAAAATCAGACCAGCTTGGGCTACCTAGTGAGACTCTTCTCCCCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCAGACCAGCTTGGGCTACCTAGTGAGACTCTTCTCCCCTTCC  640

seq1  CCCAAAAGTCTCTAGCTATATCATATTCAATAGTGAAGGAATAAAAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGTCTCTAGCTATATCATATTCAATAGTGAAGGAATAAAAGTAT  690

seq1  GTAGATTTGAAAAGAGTAAGTAAACAGGCTTCTTTCTAAGATGTTCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTGAAAAGAGTAAGTAAACAGGCTTCTTTCTAAGATGTTCAAGT  740

seq1  ATTGTTCTAAGATATAATCTTATATGTACAAAAATCTAATGAAGCCCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTAAGATATAATCTTATATGTACAAAAATCTAATGAAGCCCAAA  790

seq1  GAAAACACAAACTAAACTAAACTACACTAAACTAAACAAACTAAAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACACAAACTAAACTAAACTACACTAAACTAAACAAACTAAAATAGT  840

seq1  AAGTTTAGAAAAGTTTGGGAATAAAAGATCAATACATTCAGTGGCATGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAGAAAAGTTTGGGAATAAAAGATCAATACATTCAGTGGCATGTA  890

seq1  TTGTCACTCTAGAGGCATACAATGTCACCTTCTGGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTCTAGAGGCATACAATGTCACCTTCTGGAATTC  930