BAC Information

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BAC

Clone NameB6Ng01-019B03
Chromosome12 (Build37)
Map Location 120,330,734 - 120,454,975
singlet/doubletdoublet
Overlap geneItgb8
Upstream geneDnahc11, Sp4, LOC100042993, LOC668611, EG668615, LOC620665, Sp8, Abcb5
Downstream geneEG627557, LOC100043011, 4732474O15Rik, LOC668632, LOC668633, Gm528, LOC100043017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019B03.bB6Ng01-019B03.g
ACCDH852271DH852272
length663467
definitionDH852271|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B03, 5' end.DH852272|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,454,313 - 120,454,975)(120,330,734 - 120,331,206)
sequence
gaattcttttgaaacaaatttaattttcaaaataaattgtattttcaaaa
gactttcaaaataaaagttgtattttcaaaataaataatgtcactagggt
atatttgttttcatgaatttggagagtcatgtgcttcatgcagatgtgga
ttaagaagcaaacatgttgccttttaaaataaatgtttggtaaatgaaga
ctattttaaaatgtaagtattcaagagctgttataaaccccaggaattaa
atttccaaattaagcttcacatagaattctgtttattcactgcacactga
ataaatgcattcattatgcatgacccgggtaccagggatataaagaaaat
acattataggtatacaagagagttcagaggattagtacaattgctacaac
ctgagttggatctctggaacctatgtaaaggtagaaggatagagtcagct
ctgcaaagtaggcttgtgacatgtacaaaattatgctcatcatcaaggta
caggcatatatacatatcacatacacatgaaataatgataaataataaca
ataaattaattaaattaatcttttaataaaaaataaaataagtttaaaga
gtctagtcattttctccaaggcaacgcaaacaaaatgtgtgtgtgagtgg
ggtgggggagtct
attgggtatcagtggcaataatgatcatctatttccaaagagggagaaac
tttctggaattttacaaagtcttgtgtcttaaaattctagaacgaagagg
tcaaggcagggagaagaagttgaatttaagagtcaaaataattggacata
gaaaaagttttgtaccacgttacgcattccagctactaaatagttttttc
agatagttcccagttttttaataccctactttagaaggaccagcaaggag
actggaaaggaggttgttagggatggaaggtgtagtcatgtggagtcttt
gggatattttgaagatttggttttctgtgagatggaaaatcacagaatgg
tttgagaagaagggtagaatgacctgtatgttttagcaggcagtgaacaa
aaggtgctatggtcagtatagttaggacattcataataatctgatgtgca
ggttgtgtctctggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_120454313_120454975
seq2: B6Ng01-019B03.b_42_704 (reverse)

seq1  AGACTCCCCCACCCCACTCACACACACATTTTGTTTGCGTTGCCTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCCCCACCCCACTCACACACACATTTTGTTTGCGTTGCCTTGGAG  50

seq1  AAAATGACTAGACTCTTTAAACTTATTTTATTTTTTATTAAAAGATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACTAGACTCTTTAAACTTATTTTATTTTTTATTAAAAGATTAAT  100

seq1  TTAATTAATTTATTGTTATTATTTATCATTATTTCATGTGTATGTGATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATTTATTGTTATTATTTATCATTATTTCATGTGTATGTGATAT  150

seq1  GTATATATGCCTGTACCTTGATGATGAGCATAATTTTGTACATGTCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATGCCTGTACCTTGATGATGAGCATAATTTTGTACATGTCACAA  200

seq1  GCCTACTTTGCAGAGCTGACTCTATCCTTCTACCTTTACATAGGTTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTTTGCAGAGCTGACTCTATCCTTCTACCTTTACATAGGTTCCAG  250

seq1  AGATCCAACTCAGGTTGTAGCAATTGTACTAATCCTCTGAACTCTCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAACTCAGGTTGTAGCAATTGTACTAATCCTCTGAACTCTCTTGT  300

seq1  ATACCTATAATGTATTTTCTTTATATCCCTGGTACCCGGGTCATGCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTATAATGTATTTTCTTTATATCCCTGGTACCCGGGTCATGCATAA  350

seq1  TGAATGCATTTATTCAGTGTGCAGTGAATAAACAGAATTCTATGTGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATTTATTCAGTGTGCAGTGAATAAACAGAATTCTATGTGAAGC  400

seq1  TTAATTTGGAAATTTAATTCCTGGGGTTTATAACAGCTCTTGAATACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGGAAATTTAATTCCTGGGGTTTATAACAGCTCTTGAATACTTA  450

seq1  CATTTTAAAATAGTCTTCATTTACCAAACATTTATTTTAAAAGGCAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAATAGTCTTCATTTACCAAACATTTATTTTAAAAGGCAACAT  500

seq1  GTTTGCTTCTTAATCCACATCTGCATGAAGCACATGACTCTCCAAATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTCTTAATCCACATCTGCATGAAGCACATGACTCTCCAAATTCA  550

seq1  TGAAAACAAATATACCCTAGTGACATTATTTATTTTGAAAATACAACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAATATACCCTAGTGACATTATTTATTTTGAAAATACAACTTT  600

seq1  TATTTTGAAAGTCTTTTGAAAATACAATTTATTTTGAAAATTAAATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAAGTCTTTTGAAAATACAATTTATTTTGAAAATTAAATTTGT  650

seq1  TTCAAAAGAATTC  663
      |||||||||||||
seq2  TTCAAAAGAATTC  663

seq1: chr12_120330734_120331206
seq2: B6Ng01-019B03.g_69_541

seq1  GAATTCATTGGGTATCAGTGGCAATAATGATCATCTATTTCCAAAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGGTATCAGTGGCAATAATGATCATCTATTTCCAAAGAGGG  50

seq1  AGAAACTTTCTGGAATTTTACAAAGTCTTGTGTCTTAAAATTCTAGAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTTCTGGAATTTTACAAAGTCTTGTGTCTTAAAATTCTAGAACG  100

seq1  AAGAGGTCAAGGCAGGGAGAAGAAGTTGAATTTAAGAGTCAAAATAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCAAGGCAGGGAGAAGAAGTTGAATTTAAGAGTCAAAATAATTG  150

seq1  GACATAGAAAAAGTTTTGTACCACGTTACGCATTCCAGCTACTAAATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAAAAAGTTTTGTACCACGTTACGCATTCCAGCTACTAAATAGT  200

seq1  TTTTTCAGATAGTTCCCAGTTTTTTAATACCCTACTTTAGAAGGACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGATAGTTCCCAGTTTTTTAATACCCTACTTTAGAAGGACCAGC  250

seq1  AAGGAGACTGGAAAGGAGGTTGTTAGGGATGGAAGGTGTAGTCATGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACTGGAAAGGAGGTTGTTAGGGATGGAAGGTGTAGTCATGTGGA  300

seq1  GTCTTTGGGATATTTTGAAGATTTGGTTTTCTGTGAGATGGAAAATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGGGATATTTTGAAGATTTGGTTTTCTGTGAGATGGAAAATCACA  350

seq1  GAATGGTTTGAGAAGAAGGGTAGAATGACCTGTATGTTTTAGCAGGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTTTGAGAAGAAGGGTAGAATGACCTGTATGTTTTAGCAGGCAGT  400

seq1  GAACAAAAGGTGCTATGGTCAGTATAGTTAGGACATTCATAATAATCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAGGTGCTATGGTCAGTATAGTTAGGACATTCATAATAATCTGA  450

seq1  TGTGCAGGTTGTGTCTCTGGATC  473
      |||||||||||||||||||||||
seq2  TGTGCAGGTTGTGTCTCTGGATC  473