BAC Information

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BAC

Clone NameB6Ng01-020F10
Chromosome12 (Build37)
Map Location 22,814,804 - 22,815,621
singlet/doubletsinglet
Overlap geneEG668662
Upstream gene6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660
Downstream geneLOC668664, 2410018L13Rik, LOC77114, EG668669, EG668670, LOC668680, LOC100042895, LOC100043435
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020F10.bB6Ng01-020F10.g
ACCDH853167DH853168
length895818
definitionDH853167|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F10, 5' end.DH853168|Mus musculus domesticus DNA, BAC clone: B6Ng01-020F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctcgaaagtctttaccctatttatttacaatgttcataagca
acacaggtgaaccttcaactcaatttcctttaaaatgttatggtagttag
attataacttctgtgtccagaagtcagtggaggaagcaccacaattatat
gaatatatggtcaaggaagcgtacatttgcttcacagtgatgtcagtacc
atgctttgtgatgtacacatgtatgtgacattttaggatgtggtgactta
tgatgatgtgcatgtgaacttcactggggaagagtggaatttgctggatc
cttctcagaagagtctctacaaagatatgatgctggagacctactggaac
ctcactgttataggtattactgaattttctttttcttttcaaaatagtgg
gaagacatttctcttggttagtgattctgctctgttattacagttgagaa
caaggaagactgagctgaataaatagtgtccagtgatgtgaaaattcgca
gtacctttaattttgccttatttccaatactgtatcattcattattccgg
tattgtcttttaggctacacttgggaaaaccatcatattaaaagacattg
tcaaagttcaagaagaaatgaaaggtaattttcacgtgaaagcttatgga
atttatgcctctaaggaaattttactatgatatggaagctctaaatcaaa
gcaggagtgtaaaatgttaatacttcaagtgtaactataattacaatatt
tttaatatttattaatttattgtatataagtacactgtagctgtccgcag
atactccagaagagggcatcaaattttgttaacagattgttatgagccac
catggtggtgccggaattttgaactcaggtacctctagagagcat
gaattcagctggagggaaaccaattccaccctaactgattcaagacgtcc
cagagacaccaattcagatttaagggcagcataaaatgatcgcctgttaa
cctactcccttccaaggatacactgagaaaaagggggcatccttctgacc
atagattcaaaatctgttagcctgagattctgaaggagctggtttatgaa
caagtcacaaaggactacaactcagaatcaaatgcaaggccagttcccac
tgtaaatgctgggcggagcctggccccatgaacagcatccccctgggagt
ctgtacagtctagatgttcattctccttttgcagttagaacagcaaagcg
atttccaaggtaaccaaggacaacagaataagagactcatggccatggaa
ggaaaaaagttaaattttaatacttaagagtcaatatcaaattcattttt
aaaactacaacaatgccaaataagaagggtaggaatgaatggagctatga
agaagccctaacaaacaacaggactgtcccaagaatgcacacaatgtttc
tctatttccagagtattttgaagtaaccagaggcttaaaaaaagtaagat
acaaaaatcaaagctgggaagagggtggggggtagcccagctcagttttc
agatttatgccacaactacttatttttctctcttatttccaaagcacaaa
gctgacaccagttgcagtctgcactttgcaaactgtgcaaagtaagtcac
ccagagaaagttatcatgaagtgaaaagttcaaaccagctacactctcac
ctgttacaaagacaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_22814804_22815621
seq2: B6Ng01-020F10.g_68_885 (reverse)

seq1  TTATTGTCTTGGTAACAGGTGAGAGTGTAGCTGGTTTGAAACTTTTCACT  50
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  TTATTGTCTTTGTAACAGGTGAGAGTGTAGCTGGTTTG-AACTTTTCACT  49

seq1  TCCTGATGACTTTCTCTGGGTGACTTACTTTGCACAGTTTGCAAAGTGCA  100
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATAACTTTCTCTGGGTGACTTACTTTGCACAGTTTGCAAAGTGCA  99

seq1  GACTGCAACTGGTGTCAGCTTTGTGCTTTGGAAATAAGGGAG-AAAATAA  149
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  GACTGCAACTGGTGTCAGCTTTGTGCTTTGGAAATAAGAGAGAAAAATAA  149

seq1  GTAGTTGTGGCATAAATCTGAAAACTGAGCTGGGCTACCCCCCACCCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGTGGCATAAATCTGAAAACTGAGCTGGGCTACCCCCCACCCTCT  199

seq1  TCCCAGCTTTGATTTTTGTATCTTACTTTTTTTAAGCCTCTGGTTACTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCTTTGATTTTTGTATCTTACTTTTTTTAAGCCTCTGGTTACTTC  249

seq1  AAAATACTCTGGAAATAGAGAAACATTGTGTGCATTCTTGGGACAGTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTCTGGAAATAGAGAAACATTGTGTGCATTCTTGGGACAGTCCT  299

seq1  GTTGTTTGTTAGGGCTTCTTCATAGCTCCATTCATTCCTACCCTTCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGTTAGGGCTTCTTCATAGCTCCATTCATTCCTACCCTTCTTAT  349

seq1  TTGGCATTGTTGTAGTTTTAAAAATGAATTTGATATTGACTCTTAAGTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTGTTGTAGTTTTAAAAATGAATTTGATATTGACTCTTAAGTAT  399

seq1  TAAAATTTAACTTTTTTCCTTCCATGGCCATGAGTCTCTTATTCTGTTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTAACTTTTTTCCTTCCATGGCCATGAGTCTCTTATTCTGTTGT  449

seq1  CCTTGGTTACCTTGGAAATCGCTTTGCTGTTCTAACTGCAAAAGGAGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTACCTTGGAAATCGCTTTGCTGTTCTAACTGCAAAAGGAGAAT  499

seq1  GAACATCTAGACTGTACAGACTCCCAGGGGGATGCTGTTCATGGGGCCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCTAGACTGTACAGACTCCCAGGGGGATGCTGTTCATGGGGCCAG  549

seq1  GCTCCGCCCAGCATTTACAGTGGGAACTGGCCTTGCATTTGATTCTGAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGCCCAGCATTTACAGTGGGAACTGGCCTTGCATTTGATTCTGAGT  599

seq1  TGTAGTCCTTTGTGACTTGTTCATAAACCAGCTCCTTCAGAATCTCAGGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCCTTTGTGACTTGTTCATAAACCAGCTCCTTCAGAATCTCAGGC  649

seq1  TAACAGATTTTGAATCTATGGTCAGAAGGATGCCCCCTTTTTCTCAGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATTTTGAATCTATGGTCAGAAGGATGCCCCCTTTTTCTCAGTGT  699

seq1  ATCCTTGGAAGGGAGTAGGTTAACAGGCGATCATTTTATGCTGCCCTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGGAAGGGAGTAGGTTAACAGGCGATCATTTTATGCTGCCCTTAA  749

seq1  ATCTGAATTGGTGTCTCTGGGACGTCTTGAATCAGTTAGGGTGGAATTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAATTGGTGTCTCTGGGACGTCTTGAATCAGTTAGGGTGGAATTGG  799

seq1  TTTCCCTCCAGCTGAATTC  818
      |||||||||||||||||||
seq2  TTTCCCTCCAGCTGAATTC  818