BAC Information

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BAC

Clone NameB6Ng01-021B16
Chromosome12 (Build37)
Map Location 60,323,059 - 60,323,994
singlet/doubletsinglet
Overlap genenone
Upstream geneClec14a, LOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33
Downstream geneLOC665628, LOC238199, LOC665639, LOC665644, EG622488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B16.bB6Ng01-021B16.g
ACCDH853707DH853708
length319983
definitionDH853707|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B16, 5' end.DH853708|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caatatagatgcacaagattgcagccaaccatcagactgaacagggggac
tccagtagaggagtttggggaaggactgaaggagctgaaggggtttgcaa
ccccaccataggaagaacaacagtatcaaccaaccagaccccccagagtt
tccaggaactacaccaccaaccaaagagtacacattgagggacccttggc
tccagctgcatatttagcagagaatggtgttattgggcaccaatgggaga
agatttgatcctgtaaaggctccatgccccaatgtaggggaatgtgaggg
ctgggaggtgggagtgggt

gaattccagaatatacagacacccagttgagacacttccagccttgtggg
actgaacagctactaaattcttggacttcccattcacagctagccattgt
tggattagctacactgtagtctgtaagtcttcccaataaattccatatat
atggaatatatataaggtctgtgactctagagaactctgactaatacaac
ctctataaaaacaaattacatcacaggtggcaaaaatatttgaatattta
ctaacattccatatttaaattaaattatttcccaaaataggttttataga
tgctttgtacaaaccaggatccaattaagggccacacttgcatttcttta
tgtaatttaaaagtttattttcctccattaaataatctgggaagtatttt
tgcttttttccttaaatgtcctcctcttcctctagccatacacttagtag
gtctgacaacaattcatgattcttgcctaaatcagtgttcaaatggtagt
aactttcttttccatcattgcatctacagttattagtttgcattattctg
ttgaagaatagaaaattactggcctcttgtgaaaacatgaattttttacc
tcggagcccaccccctcccatctagagattgtaacactcctaaacttttc
accccaaaactcctcaccctaaagttcgaaccctcccaactaaaaactgt
tccaagaacatttttgagataaaggcctcctagaacaacctcaaaatgaa
ccaggtactccttagttacgtaggttccttgataggacatgactccttag
ttacgtagattcctttggcagaactccctagtgatgtaaacttgtacttt
ccctgcccagttctcccctttgagttttactatataagcctgtaaaaatt
tttgctgaccgtcgatctctctacacactagtgccgctagtgtatgagtt
cgacccagagctctgtgctttcatgttgctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_60323059_60323994
seq2: B6Ng01-021B16.g_66_996

seq1  GAATTCCAGAATATACAGACACCCAGTTGAGACACTTCCAGCCTTGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATATACAGACACCCAGTTGAGACACTTCCAGCCTTGTGGG  50

seq1  ACTGAACAGCTACTAAATTCTTGGACTTCCCATTCACAGCTAGCCATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACAGCTACTAAATTCTTGGACTTCCCATTCACAGCTAGCCATTGT  100

seq1  TGGATTAGCTACACTGTAGTCTGTAAGTCTTCCCAATAAATTCCATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAGCTACACTGTAGTCTGTAAGTCTTCCCAATAAATTCCATATAT  150

seq1  ATGGAATATATATAAGGTCTGTGACTCTAGAGAACTCTGACTAATACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATATATATAAGGTCTGTGACTCTAGAGAACTCTGACTAATACAAC  200

seq1  CTCTATAAAAACAAATTACATCACAGGTGGCAAAAATATTTGAATATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAAAACAAATTACATCACAGGTGGCAAAAATATTTGAATATTTA  250

seq1  CTAACATTCCATATTTAAATTAAATTATTTCCCAAAATAGGTTTTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTCCATATTTAAATTAAATTATTTCCCAAAATAGGTTTTATAGA  300

seq1  TGCTTTGTACAAACCAGGATCCAATTAAGGGCCACACTTGCATTTCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTACAAACCAGGATCCAATTAAGGGCCACACTTGCATTTCTTTA  350

seq1  TGTAATTTAAAAGTTTATTTTCCTCCATTAAATAATCTGGGAAGTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTAAAAGTTTATTTTCCTCCATTAAATAATCTGGGAAGTATTTT  400

seq1  TGCTTTTTTCCTTAAATGTCCTCCTCTTCCTCTAGCCATACACTTAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTCCTTAAATGTCCTCCTCTTCCTCTAGCCATACACTTAGTAG  450

seq1  GTCTGACAACAATTCATGATTCTTGCCTAAATCAGTGTTCAAATGGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAACAATTCATGATTCTTGCCTAAATCAGTGTTCAAATGGTAGT  500

seq1  AACTTTCTTTTCCATCATTGCATCTACAGTTATTAGTTTGCATTATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTTTTCCATCATTGCATCTACAGTTATTAGTTTGCATTATTCTG  550

seq1  TTGAAGAATAGAAAATTACTGGCCTCTTGTGAAAACATGAATTTTTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAATAGAAAATTACTGGCCTCTTGTGAAAACATGAATTTTTTACC  600

seq1  TCGGAGCCCACCCCCTCCCATCTAGAGATTGTAACACTCCTAAACTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCCCACCCCCTCCCATCTAGAGATTGTAACACTCCTAAACTTTTC  650

seq1  ACCCCAAAACTCCTCACCCTAAAGTTCGAACCCTCCCAACTAAAAACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAAACTCCTCACCCTAAAGTTCGAACCCTCCCAACTAAAAACTGT  700

seq1  TCCAAGAACATTTTTGAGATAAAGGCCTCCTAGAACAACCTCAAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAACATTTTTGAGATAAAGGCCTCCTAGAACAACCTCAAAATGAA  750

seq1  CCAGGTACTCCTTAGTTACGTAGGTTCCTTGATAGGACATGACTCCTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTACTCCTTAGTTACGTAGGTTCCTTGATAGGACATGACTCCTTAG  800

seq1  TTACGTAGATTCCTTTGGCAGAACTCCCTAGTGATGTAAACTTGTACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTAGATTCCTTTGGCAGAACTCCCTAGTGATGTAAACTTGTACTTT  850

seq1  CCCTGCCCAGTTCTCCCCCTTTGAGTTTTACTATATAAGCCTGTAAAAAA  900
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  CCCTGCCCAGTTCT-CCCCTTTGAGTTTTACTATATAAGCCTGT-AAAAA  898

seq1  TTTTTGCTGACCGTCGATTCTCCTCTACACCACTAG  936
      ||||||||||||||||| ||| ||||||| ||||||
seq2  TTTTTGCTGACCGTCGA-TCT-CTCTACA-CACTAG  931


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