BAC Information

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BAC

Clone NameB6Ng01-021K17
Chromosome12 (Build37)
Map Location 100,814,779 - 100,815,830
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnk10, Spata7, Ptpn21, Zc3h14, Eml5, LOC100039845, Ttc8, EG667779, Ches1, LOC100039892
Downstream gene2610021K21Rik, Tdp1, LOC100040041, Kcnk13, Psmc1, BC002230, Calm1, Ttc7b, Rps6ka5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021K17.bB6Ng01-021K17.g
ACCDH854107DH854108
length1,1641,053
definitionDH854107|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K17, 5' end.DH854108|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaacactgaga
ttctacctcacaccagccagaaaggctaagaccaaaattcaggtgatagc
agatgctgacaaggatgtggagaaagaggaatactcctccattgttggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctgcgc
atatatccagaagatttccaaccagtaagaaggacacatgctccactatg
ttcatagcagctttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttccacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaagtaacccaatcacaaaa
gaactcacatgatatttactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgcgaaacacatgaaactcaag
aagaatgaagaccaaagtgtggatacgttgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaagatgaaccatctagagactgccatacctggggatccatcccgtaatc
agcctccaaatgctgacaccattgcatacactctcagattttgctgaaag
gaccctgatatagctgtctcttgtgagactattccggggcctagcaaaac
agaagtggatgctcacagtcagctattggatggattacagggcccccaat
ggaggagctagagaagtacccagagctagggggatctgcatcctatagtt
gaacacatatgaactatcagtacccctcccccagagctcttgttctctag
ctgttttatctaagatgtcctagtcagcttcattgaagaagttcattatg
gtcttgcaacttatatgctctattctggtacgcctgtctagattggatgt
atgggtgggtgata
gaattccttatggactctggaaactgtttcccccaccatgtttaacttta
agaagtttcttgttcattcaacaggagggaaatcatgtctgggagtggaa
agttggtcacttcctgggactagtgagattatggaccgtgggaaagaatc
tactactgacattttgcgttgctagcataattccttactccgttctaaat
cttacccatatactcatagactagtgtagctaccatccctcaccaaagac
gtttctctttacagcaaatggaaagcttcacaggaaaccacaaccaaaca
caatgcagagatcaatggattgtgggcagcccggcacaatgggtactgtt
acattacccttccacaaggatacagcccttgcccctatgactcagagaac
atctctaaagagtggggagaaagagtataaaagcccggatagcaaacagt
ctgctgtgaaacagtctctcctagaaatggctgcataaacaagatcagga
aaaacagcagtgtcaatggttatgttaatttggaagcggggagttttcac
aggggcccagccctagacaaagaactacaggtgactgctgacttctggag
gagggagagttagcctctccagggatgagctctgctatttggttttccag
ggcagaattgtcagccttgacactatatacacacggacaacaaaaacaga
cgcagcacagtctatttatatatatttgtgcatatatgtatatataaaca
tatatgcatagagtgtataatcaaagaaaaagaggctatcagcttgaggt
aacttcattgctcttcacaactgtactgttgctactgctatgaatggtaa
tgttgatttcctgctttgcagagtatctgatggtacaatcccagggtgtt
gggacccacaggttgagaactgctgacttacggtatcataaatcagaaca
cagagttctgatctattccagtgtgggtccgaagccgttgaaatgttttg
agcaggaaatgtacatgttctggatgtatgttttctaaattacccatttc
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_100814779_100815830
seq2: B6Ng01-021K17.g_68_1120

seq1  GAATTCCTTATGGACTCTGGAAACTGTTTCCCCCACCATGTTTAACTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATGGACTCTGGAAACTGTTTCCCCCACCATGTTTAACTTTA  50

seq1  AGAAGTTTCTTGTTCATTCAACAGGAGGGAAATCATGTCTGGGAGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTCTTGTTCATTCAACAGGAGGGAAATCATGTCTGGGAGTGGAA  100

seq1  AGTTGGTCACTTCCTGGGACTAGTGAGATTATGGACCGTGGGAAAGAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTCACTTCCTGGGACTAGTGAGATTATGGACCGTGGGAAAGAATC  150

seq1  TACTACTGACATTTTGCGTTGCTAGCATAATTCCTTACTCCGTTCTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTGACATTTTGCGTTGCTAGCATAATTCCTTACTCCGTTCTAAAT  200

seq1  CTTACCCATATACTCATAGACTAGTGTAGCTACCATCCCTCACCAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCATATACTCATAGACTAGTGTAGCTACCATCCCTCACCAAAGAC  250

seq1  GTTTCTCTTTACAGCAAATGGAAAGCTTCACAGGAAACCACAACCAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTTTACAGCAAATGGAAAGCTTCACAGGAAACCACAACCAAACA  300

seq1  CAATGCAGAGATCAATGGATTGTGGGCAGCCCGGCACAATGGGTACTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGAGATCAATGGATTGTGGGCAGCCCGGCACAATGGGTACTGTT  350

seq1  ACATTACCCTTCCACAAGGATACAGCCCTTGCCCCTATGACTCAGAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACCCTTCCACAAGGATACAGCCCTTGCCCCTATGACTCAGAGAAC  400

seq1  ATCTCTAAAGAGTGGGGAGAAAGAGTATAAAAGCCCGGATAGCAAACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAAAGAGTGGGGAGAAAGAGTATAAAAGCCCGGATAGCAAACAGT  450

seq1  CTGCTGTGAAACAGTCTCTCCTAGAAATGGCTGCATAAACAAGATCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGAAACAGTCTCTCCTAGAAATGGCTGCATAAACAAGATCAGGA  500

seq1  AAAACAGCAGTGTCAATGGTTATGTTAATTTGGAAGCGGGGAGTTTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAGTGTCAATGGTTATGTTAATTTGGAAGCGGGGAGTTTTCAC  550

seq1  AGGGGCCCAGCCCTAGACAAAGAACTACAGGTGACTGCTGACTTCTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCCAGCCCTAGACAAAGAACTACAGGTGACTGCTGACTTCTGGAG  600

seq1  GAGGGAGAGTTAGCCTCTCCAGGGATGAGCTCTGCTATTTGGTTTTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGTTAGCCTCTCCAGGGATGAGCTCTGCTATTTGGTTTTCCAG  650

seq1  GGCAGAATTGTCAGCCTTGACACTATATACACACGGACAACAAAAACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATTGTCAGCCTTGACACTATATACACACGGACAACAAAAACAGA  700

seq1  CGCAGCACAGTCTATTTATATATATTTGTGCATATATGTATATATAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCACAGTCTATTTATATATATTTGTGCATATATGTATATATAAACA  750

seq1  TATATGCATAGAGTGTATAATCAAAGAAAAAGAGGCTATCAGCTTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCATAGAGTGTATAATCAAAGAAAAAGAGGCTATCAGCTTGAGGT  800

seq1  AACTTCATTGCTCCTTCACAACTGTACTGTTGCTACTGCTATGAATGGTA  850
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AACTTCATTGCT-CTTCACAACTGTACTGTTGCTACTGCTATGAATGGTA  849

seq1  ATGTTGATAT-CTGCTTTGCAGAGTATCTGAT-GTACAATCCCAAGGGTG  898
      |||||||| | ||||||||||||||||||||| |||||||||| ||||||
seq2  ATGTTGATTTCCTGCTTTGCAGAGTATCTGATGGTACAATCCC-AGGGTG  898

seq1  TTGGGACCCACAGGTTGAGAACTGCTGACTTACGGTATCATAAATCAGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACCCACAGGTTGAGAACTGCTGACTTACGGTATCATAAATCAGAA  948

seq1  CACAGAGTTCTGATCTATTCCAAGTGT-GGTCCGAAGCCGTTAGAAATGT  997
      ||||||||||||||||||||| ||||| |||||||||||||| |||||||
seq2  CACAGAGTTCTGATCTATTCC-AGTGTGGGTCCGAAGCCGTT-GAAATGT  996

seq1  TTTGAGCAGGAAAGGCACA-GGTCTGGATG-ATG-TTTCTAAAATACCGC  1044
      ||||||||||||| | ||| | |||||||| ||| |||||||| |||| |
seq2  TTTGAGCAGGAAATGTACATGTTCTGGATGTATGTTTTCTAAATTACC-C  1045

seq1  ATTTCATG  1052
      ||||||||
seq2  ATTTCATG  1053