BAC Information

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BAC

Clone NameB6Ng01-021L12
Chromosome12 (Build37)
Map Location 31,807,960 - 31,809,060
singlet/doubletsinglet
Overlap geneLOC668781
Upstream geneTpo, Sntg2, Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik
Downstream geneLOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021L12.bB6Ng01-021L12.g
ACCDH854145DH854146
length1,0991,144
definitionDH854145|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L12, 5' end.DH854146|Mus musculus domesticus DNA, BAC clone: B6Ng01-021L12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagggtagagccaggcacagaaagatctgctgggggagatgtga
agagatggatgcatggtacctgaacacaggtaactggccatgtggccaga
gtctgagactttatatctgagagcatcaggctgggaggcagaaccaggtc
taatgtctacaggagggcaaggaaactttggatctgcttctgtaacatct
agcctcatgatcatgagaactgtaaggattgtgaaaatgcatgttgtttg
ctacacacagtaatctcaagagagatgagaggctctgctctcacataatc
ctccatcttggcagtttgctccagaacaggactcctctaaatccacttat
gcagacacggtccggcttcagaaagactccaaaggagccctgtcacagag
ccatagctgacaagccccttctgtattagggtcacatctcatagtctgga
tgcgaagaatggattgggagtgactctgtggcaaggatcttggggactga
tttgggagttgacttgagaacacaaatgtaacaactgcacgaactggatg
agcagaaataaattaatacttcatttctaagataggcgagtagatcttgg
atttgatccatatttgggtcctcaaattccatctcatttgggtcttcgag
gccacccaaccagaaaagtctgggtatgttctgtaaccctggtctgacct
acaacagcacacatgactgagcaggtggaggtgcaggccaccagagactt
ctcaaatggcaggcttgatccctcacatgaaggtgaggcagaaccaggag
tcccctcccactctgccccatcttgggataaacagaccaaagaatgaaag
agagcccggaaggggaggagtcacttgtatgtaggcatcatgttgttgtg
cttgtgtaaagctttatcctcgtattattcaaattctgacgactgtgtcc
cctcaccctcatttctgattgcatccttattctgcaactctcttgtcctc
atgttgtgtaacaactgctcccagttattttcttgactggtcaataagag
ctgatcagtcaatggctgagcagggcagagaatagggctggacttcctc
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatatactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaagacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaatgctgacaccattgcatacactagcaagattttactgaaag
gacccagatgtagctgtctcttgtgagactatgccggggtctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggagggctagaagaagtacccagagctaagggatctccatcctatagtgg
aacaactttatgatcaccagtacccctgacttctgactctagctgcatat
gtatcaaagatgctagtcgccatctactgaagaagtccattgacccctaa
ctttgtgcccgtacaggatccatgcataaggggggagtggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31807960_31809060
seq2: B6Ng01-021L12.b_47_1145 (reverse)

seq1  GAGGAAGTCCAGCCCTATTCTCTGCCCTGCTCAGCCATTGACTGATCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGTCCAGCCCTATTCTCTGCCCTGCTCAGCCATTGACTGATCAGC  50

seq1  TCTTTATTGACCAGTC-AGGAAATAACTGGGGAGCAGTGTTTACACAACA  99
      || ||||||||||||| || |||||||| |||||||||  ||||||||||
seq2  TC-TTATTGACCAGTCAAGAAAATAACT-GGGAGCAGTTGTTACACAACA  98

seq1  TTGAGACAGGAGAGTTGCAGAATAAGGATTGCAATCAGATATGAGGGTGA  149
      |   |||| ||||||||||||||||||| |||||||||| ||||||||||
seq2  TGAGGACAAGAGAGTTGCAGAATAAGGA-TGCAATCAGAAATGAGGGTGA  147

seq1  GGGGACACAGTCGTCAGAATTTGAATAATACGAGGAT-AAGCTTTACACA  198
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGGGACACAGTCGTCAGAATTTGAATAATACGAGGATAAAGCTTTACACA  197

seq1  AGGCACAACAACATGATGCCTACATACAAGTGACTCCTCCCCTTCCGGGC  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GCACAACAACATGATGCCTACATACAAGTGACTCCTCCCCTTCCGGGC  246

seq1  TCTCTTTCATTCTTTGGTCTGTTTATCCCAAGATGGGGCAGAGTGGGAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCATTCTTTGGTCTGTTTATCCCAAGATGGGGCAGAGTGGGAGG  296

seq1  GGACTCCTGGTTCTGCCTCACCTTCATGTGAGGGATCAAGCCTGCCATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCTGGTTCTGCCTCACCTTCATGTGAGGGATCAAGCCTGCCATTT  346

seq1  GAGAAGTCTCTGGTGGCCTGCACCTCCACCTGCTCAGTCATGTGTGCTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTCTCTGGTGGCCTGCACCTCCACCTGCTCAGTCATGTGTGCTGT  396

seq1  TGTAGGTCAGACCAGGGTTACAGAACATACCCAGACTTTTCTGGTTGGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTCAGACCAGGGTTACAGAACATACCCAGACTTTTCTGGTTGGGT  446

seq1  GGCCTCGAAGACCCAAATGAGATGGAATTTGAGGACCCAAATATGGATCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCGAAGACCCAAATGAGATGGAATTTGAGGACCCAAATATGGATCA  496

seq1  AATCCAAGATCTACTCGCCTATCTTAGAAATGAAGTATTAATTTATTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGATCTACTCGCCTATCTTAGAAATGAAGTATTAATTTATTTCT  546

seq1  GCTCATCCAGTTCGTGCAGTTGTTACATTTGTGTTCTCAAGTCAACTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCCAGTTCGTGCAGTTGTTACATTTGTGTTCTCAAGTCAACTCCC  596

seq1  AAATCAGTCCCCAAGATCCTTGCCACAGAGTCACTCCCAATCCATTCTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTCCCCAAGATCCTTGCCACAGAGTCACTCCCAATCCATTCTTC  646

seq1  GCATCCAGACTATGAGATGTGACCCTAATACAGAAGGGGCTTGTCAGCTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCAGACTATGAGATGTGACCCTAATACAGAAGGGGCTTGTCAGCTA  696

seq1  TGGCTCTGTGACAGGGCTCCTTTGGAGTCTTTCTGAAGCCGGACCGTGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTGTGACAGGGCTCCTTTGGAGTCTTTCTGAAGCCGGACCGTGTC  746

seq1  TGCATAAGTGGATTTAGAGGAGTCCTGTTCTGGAGCAAACTGCCAAGATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAGTGGATTTAGAGGAGTCCTGTTCTGGAGCAAACTGCCAAGATG  796

seq1  GAGGATTATGTGAGAGCAGAGCCTCTCATCTCTCTTGAGATTACTGTGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATGTGAGAGCAGAGCCTCTCATCTCTCTTGAGATTACTGTGTG  846

seq1  TAGCAAACAACATGCATTTTCACAATCCTTACAGTTCTCATGATCATGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACAACATGCATTTTCACAATCCTTACAGTTCTCATGATCATGAG  896

seq1  GCTAGATGTTACAGAAGCAGATCCAAAGTTTCCTTGCCCTCCTGTAGACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGATGTTACAGAAGCAGATCCAAAGTTTCCTTGCCCTCCTGTAGACA  946

seq1  TTAGACCTGGTTCTGCCTCCCAGCCTGATGCTCTCAGATATAAAGTCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTGGTTCTGCCTCCCAGCCTGATGCTCTCAGATATAAAGTCTCA  996

seq1  GACTCTGGCCACATGGCCAGTTACCTGTGTTCAGGTACCATGCATCCATC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGCCACATGGCCAGTTACCTGTGTTCAGGTACCATGCATCCATC  1046

seq1  TCTTCACATCTCCCCCAGCAGATCTTTCTGTGCCTGGCTCTACCCTGGAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACATCTCCCCCAGCAGATCTTTCTGTGCCTGGCTCTACCCTGGAA  1096

seq1  TTC  1101
      |||
seq2  TTC  1099