BAC Information

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BAC

Clone NameB6Ng01-022A08
Chromosome12 (Build37)
Map Location 8,156,429 - 8,271,350
singlet/doubletdoublet
Overlap gene1110057K04Rik
Upstream geneLOC668380, EG668388, Apob
Downstream geneGdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022A08.bB6Ng01-022A08.g
ACCDH854365DH854366
length9731,064
definitionDH854365|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A08, 5' end.DH854366|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,270,377 - 8,271,350)(8,156,429 - 8,157,507)
sequence
gaattctccctttgtgtctcttgctaatagggaacagggatctgagagtg
aaagccgaggagggttttttctttctggtcatatcttgttttttcttggt
cccatctctcagctaagtatttaggtatttcctgtagactttttcatccc
acaataattgagatattttgtttccgttttggtcacaatactttgagttt
ctctggctttcttcctctgtccagtaagaagggttttgctcctggagtac
ctgtatggcctggacaatgagtgaaaacgttttgagaggaaggggttttt
cagacaacttaaaatgttgctttggtagctgtgttggcaaatgctttcaa
cactttttaaacaaaatgcagagttcagctacaacagaaagtatgttctg
tacattttctaaagcttagagtatagtgcagggatttggcatgctacttc
aacagtaggcagcatgctttaggagtctgaggggtaaaaacgatgaaaaa
tctttcaggaatggaagttgcgtttaattagccgttgactttccagctcc
caattcagagtcctatcttttaagtaattctaatgtcaagagtcctttca
ttgtgaaagccacagagatgctgtggatttaatgagacttggcagatttc
aaatgcatggtttagtgcaaagtagtcatcaatcctgagacaggaagggc
ctctcagccctgggaagcttccgtggtggagggagagcttcctccccacc
tcgttagaagagatcccctctgcctaaggagaggctgcttgggaacagct
cagggagcagcacaaggacgtagaaactgagacttctaggtccaggggtg
acaatgtggtaaggaagcctggctggccacagtcagtattgtcatgctag
tagacttctgtatgctggtaactaggattggtctgtctctttcttttctc
atttgtgtcctaggtttggatat
gaattcaagttctaatcagtcagaaaataaaagccaagtcggaagtagta
gtggccagtttgtttgtgtgtgttataattcaggggcagacaataagcaa
atacacaaataaatacatgacgtgggatgagattagtaatgtcagaaaga
ataagaggggacaaagaacctatgaggaacacaggaagaaaggattgttg
ggaaaagcatctgaaatgagctgggtgtggtctgcccccacagcaactga
aaactgacagctgatgtaatagtttgtagaggtaagacagttaacggaga
ttaatggtttcctctagagatgaggttcatccttatggggatggactagt
ctttccatggaccagtttttataaagtgtgtgagctcctttctctctccc
ttctataaactctgtttccctttggtttttccattattcatgggggtaac
atgtggtcctcacttgaacctaagtagatttgggtgccacactctcggac
ttctagactcaggagctaaatagccctggtttctttataaagtactcgat
ctgcagaatcccttataccagcacaaggcagaggaagacactgcctcctc
taagacatccaccatgttgcaattttatcaagtgtcttctagacttaagt
ctatcctttaatattgtcttgcttaatttcttttatttatgtttattcct
tcctatttcttctctcaaacctaattttctaatcctgaaatcaacaaagg
ggtgaagttatcgaagaaaacacattaaatctagccagcctcaaatcaaa
ccctctgaagccagtttgcatataacttgcttatgtggcctatttgcata
taacttgcttgtgtggcctattgaccacactctattccactgactcttct
ttcatatttcaccattatagcagtctcgtgaagtaggagtgttatcatcc
tgagttttatgtctcctaagtgctaattcggttgtttgctggggctaagg
atgccttatttcctgtgttcaataaactgtttgcctactccacgaggtca
caaataatccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8270377_8271350
seq2: B6Ng01-022A08.b_46_1018 (reverse)

seq1  ATATACAAACCTA-GACACAAATGAGAAAAGAAAGAGACAGACCATTCCT  49
      |||| |||||||| ||||||||||||||||||||||||||||||| ||||
seq2  ATATCCAAACCTAGGACACAAATGAGAAAAGAAAGAGACAGACCAATCCT  50

seq1  AGTTACCAGCATACAGAAGTCTACCTAGCATGAACAATACTGACTGTGGC  99
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  AGTTACCAGCATACAGAAGTCTA-CTAGCATG-ACAATACTGACTGTGGC  98

seq1  CAGCCAGGCTTCCTTACCACATTGTCACCCCTGGACCTAGAAGTCTCAGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGCTTCCTTACCACATTGTCACCCCTGGACCTAGAAGTCTCAGT  148

seq1  TTCTACGTCCTTGTGCTGCTCCCTGAGCTGTTCCCAAGCAGCCTCTCCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACGTCCTTGTGCTGCTCCCTGAGCTGTTCCCAAGCAGCCTCTCCTT  198

seq1  AGGCAGAGGGGATCTCTTCTAACGAGGTGGGGAGGAAGCTCTCCCTCCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGGGATCTCTTCTAACGAGGTGGGGAGGAAGCTCTCCCTCCAC  248

seq1  CACGGAAGCTTCCCAGGGCTGAGAGGCCCTTCCTGTCTCAGGATTGATGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGAAGCTTCCCAGGGCTGAGAGGCCCTTCCTGTCTCAGGATTGATGA  298

seq1  CTACTTTGCACTAAACCATGCATTTGAAATCTGCCAAGTCTCATTAAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGCACTAAACCATGCATTTGAAATCTGCCAAGTCTCATTAAATC  348

seq1  CACAGCATCTCTGTGGCTTTCACAATGAAAGGACTCTTGACATTAGAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATCTCTGTGGCTTTCACAATGAAAGGACTCTTGACATTAGAATT  398

seq1  ACTTAAAAGATAGGACTCTGAATTGGGAGCTGGAAAGTCAACGGCTAATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAGATAGGACTCTGAATTGGGAGCTGGAAAGTCAACGGCTAATT  448

seq1  AAACGCAACTTCCATTCCTGAAAGATTTTTCATCGTTTTTACCCCTCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCAACTTCCATTCCTGAAAGATTTTTCATCGTTTTTACCCCTCAGA  498

seq1  CTCCTAAAGCATGCTGCCTACTGTTGAAGTAGCATGCCAAATCCCTGCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAAGCATGCTGCCTACTGTTGAAGTAGCATGCCAAATCCCTGCAC  548

seq1  TATACTCTAAGCTTTAGAAAATGTACAGAACATACTTTCTGTTGTAGCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCTAAGCTTTAGAAAATGTACAGAACATACTTTCTGTTGTAGCTG  598

seq1  AACTCTGCATTTTGTTTAAAAAGTGTTGAAAGCATTTGCCAACACAGCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGCATTTTGTTTAAAAAGTGTTGAAAGCATTTGCCAACACAGCTA  648

seq1  CCAAAGCAACATTTTAAGTTGTCTGAAAAACCCCTTCCTCTCAAAACGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCAACATTTTAAGTTGTCTGAAAAACCCCTTCCTCTCAAAACGTT  698

seq1  TTCACTCATTGTCCAGGCCATACAGGTACTCCAGGAGCAAAACCCTTCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCATTGTCCAGGCCATACAGGTACTCCAGGAGCAAAACCCTTCTT  748

seq1  ACTGGACAGAGGAAGAAAGCCAGAGAAACTCAAAGTATTGTGACCAAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAGAGGAAGAAAGCCAGAGAAACTCAAAGTATTGTGACCAAAAC  798

seq1  GGAAACAAAATATCTCAATTATTGTGGGATGAAAAAGTCTACAGGAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAAATATCTCAATTATTGTGGGATGAAAAAGTCTACAGGAAATA  848

seq1  CCTAAATACTTAGCTGAGAGATGGGACCAAGAAAAAACAAGATATGACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATACTTAGCTGAGAGATGGGACCAAGAAAAAACAAGATATGACCA  898

seq1  GAAAGAAAAAACCCTCCTCGGCTTTCACTCTCAGATCCCTGTTCCCTATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAAACCCTCCTCGGCTTTCACTCTCAGATCCCTGTTCCCTATT  948

seq1  AGCAAGAGACACAAAGGGAGAATTC  974
      |||||||||||||||||||||||||
seq2  AGCAAGAGACACAAAGGGAGAATTC  973

seq1: chr12_8156429_8157507
seq2: B6Ng01-022A08.g_69_1132

seq1  GAATTCAAGTTCTAATCAGTCAGAAAATAAAAGCCAAGTCGGAAGTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTCTAATCAGTCAGAAAATAAAAGCCAAGTCGGAAGTAGTA  50

seq1  GTGGCCAGTTTGTTTGTGTGTGTTATAATTCAGGGGCAGACAATAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGTTTGTTTGTGTGTGTTATAATTCAGGGGCAGACAATAAGCAA  100

seq1  ATACACAAATAAATACATGACGTGGGATGAGATTAGTAATGTCAGAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAATAAATACATGACGTGGGATGAGATTAGTAATGTCAGAAAGA  150

seq1  ATAAGAGGGGACAAAGAACCTATGAGGAACACAGGAAGAAAGGATTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGGGACAAAGAACCTATGAGGAACACAGGAAGAAAGGATTGTTG  200

seq1  GGAAAAGCATCTGAAATGAGCTGGGTGTGGTCTGCCCCCACAGCAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCATCTGAAATGAGCTGGGTGTGGTCTGCCCCCACAGCAACTGA  250

seq1  AAACTGACAGCTGATGTAATAGTTTGTAGAGGTAAGACAGTTAACGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACAGCTGATGTAATAGTTTGTAGAGGTAAGACAGTTAACGGAGA  300

seq1  TTAATGGTTTCCTCTAGAGATGAGGTTCATCCTTATGGGGATGGACTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTTTCCTCTAGAGATGAGGTTCATCCTTATGGGGATGGACTAGT  350

seq1  CTTTCCATGGACCAGTTTTTATAAAGTGTGTGAGCTCCTTTCTCTCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATGGACCAGTTTTTATAAAGTGTGTGAGCTCCTTTCTCTCTCCC  400

seq1  TTCTATAAACTCTGTTTCCCTTTGGTTTTTCCATTATTCATGGGGGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAACTCTGTTTCCCTTTGGTTTTTCCATTATTCATGGGGGTAAC  450

seq1  ATGTGGTCCTCACTTGAACCTAAGTAGATTTGGGTGCCACACTCTCGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCCTCACTTGAACCTAAGTAGATTTGGGTGCCACACTCTCGGAC  500

seq1  TTCTAGACTCAGGAGCTAAATAGCCCTGGTTTCTTTATAAAGTACTCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACTCAGGAGCTAAATAGCCCTGGTTTCTTTATAAAGTACTCGAT  550

seq1  CTGCAGAATCCCTTATACCAGCACAAGGCAGAGGAAGACACTGCCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAATCCCTTATACCAGCACAAGGCAGAGGAAGACACTGCCTCCTC  600

seq1  TAAGACATCCACCATGTTGCAATTTTATCAAGTGTCTTCTAGACTTAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCCACCATGTTGCAATTTTATCAAGTGTCTTCTAGACTTAAGT  650

seq1  CTATCCTTTAATATTGTCTTGCTTAATTTCTTTTATTTATGTTTATTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTTAATATTGTCTTGCTTAATTTCTTTTATTTATGTTTATTCCT  700

seq1  TCCTATTTCTTCTCTCAAACCTAATTTTCTAATCCTGAAATCAACAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTTCTTCTCTCAAACCTAATTTTCTAATCCTGAAATCAACAAAGG  750

seq1  GGTGAAGTTATCGAAGAAAACACATTAAATCTAGCCAGCCTCAAATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGTTATCGAAGAAAACACATTAAATCTAGCCAGCCTCAAATCAAA  800

seq1  CCCTCTGAAGCCAGTTTGCATATAACTTGCTTATGTGGCCTATTTGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGAAGCCAGTTTGCATATAACTTGCTTATGTGGCCTATTTGCATA  850

seq1  TAACTTGCTTGTGTGGCCTATTGACCACACTCTATTCCCACTGACTCTTC  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAACTTGCTTGTGTGGCCTATTGACCACACTCTATT-CCACTGACTCTTC  899

seq1  TTTCAATATTTCACCATTATAGCAGTTCTCGTGAAGTAGGAGTGTTTATC  950
      |||| |||||||||||||||||||| |||||||||||||||||| |||||
seq2  TTTC-ATATTTCACCATTATAGCAG-TCTCGTGAAGTAGGAGTG-TTATC  946

seq1  ATCCTGAGTTTTATGTCTCCTAAGTGCTAATTTCGGGTTGTTTGCTGTGG  1000
      ||||||||||||||||||||||||||||||||   |||||||||||| ||
seq2  ATCCTGAGTTTTATGTCTCCTAAGTGCTAATT--CGGTTGTTTGCTG-GG  993

seq1  GCTACAGGTATGCCTTATTTCCATGTTTCCAATAAACATGTATGCCTACT  1050
      |||| ||| ||||||||||||| ||| | |||||||| ||| ||||||||
seq2  GCTA-AGG-ATGCCTTATTTCC-TGTGTTCAATAAAC-TGTTTGCCTACT  1039

seq1  CACACGAGAGTCATCAAATTAATCCATTT  1079
      | |||||| |||| |||| ||||||||||
seq2  C-CACGAG-GTCA-CAAA-TAATCCATTT  1064