BAC Information

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BAC

Clone NameB6Ng01-022D17
Chromosome12 (Build37)
Map Location 84,764,541 - 84,944,865
singlet/doubletdoublet
Overlap geneDpf3, Wdr21, Zfyve1
Upstream geneRgs6
Downstream geneLOC626950, Rbm25, Psen1, Papln, Numb, LOC100042325, 2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52, Chx10, Abcd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022D17.bB6Ng01-022D17.g
ACCDH854507DH854508
length641184
definitionDH854507|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D17, 5' end.DH854508|Mus musculus domesticus DNA, BAC clone: B6Ng01-022D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,764,541 - 84,765,087)(84,944,676 - 84,944,865)
sequence
gaattcaggctagacctgggctggaagcttccttcttactggctagccct
cggaggtatgcaaggctcctaggggagaattcccaagaggaggagtcata
ctcagctatggtctctgtgtgtaataatactgcctggccaagcctgacga
gtcaatggtgcatcagtgacaagcctgttatggggggttgaacaactgtt
tcccgcctgattatatttgatacctaatttacaggacaaaattcatgtct
gggtcacaaatcaagccaaaagcctgaggctggggaggtcatggggtgga
gtggaaaagctacttctgctgttttggctaaactgatgtgcccatcagat
caccctctaactaaccgttgatgcccataggtgagcgctgctgtccctgt
tggccagagaagcttgtctttgtgatggtcacagatggctatagagatgc
ttaactgtaactcagtcaaacgtactaagaataggttcctgttgagtgac
cagtcatagatggtctctctatcacttcctccacggtcagggaacatggc
agaggaaggggcagaaagaatgtgagaggaagaggaagggagttaaggtt
aggtacaactcagcttcttgtccaaagaatggaaggcattg
acttctggaggtggtaggaaaaccaaatttcctaacctgcaaggcaaggt
gtttcttgggatctggcaaattcaccaagtcagtgacatttcttagcaca
gtttgtatatttcacacagtatagctgaatgcagcctcatgaactttgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_84764541_84765087
seq2: B6Ng01-022D17.b_137_683

seq1  AGTCATACTCAGCTATGGTCTCTGTGTGTAATAATACTGCCTGGCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATACTCAGCTATGGTCTCTGTGTGTAATAATACTGCCTGGCCAAGC  50

seq1  CTGACGAGTCAATGGTGCATCAGTGACAAGCCTGTTATGGGGGGTTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGAGTCAATGGTGCATCAGTGACAAGCCTGTTATGGGGGGTTGAAC  100

seq1  AACTGTTTCCCGCCTGATTATATTTGATACCTAATTTACAGGACAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTTCCCGCCTGATTATATTTGATACCTAATTTACAGGACAAAATT  150

seq1  CATGTCTGGGTCACAAATCAAGCCAAAAGCCTGAGGCTGGGGAGGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGGGTCACAAATCAAGCCAAAAGCCTGAGGCTGGGGAGGTCATG  200

seq1  GGGTGGAGTGGAAAAGCTACTTCTGCTGTTTTGGCTAAACTGATGTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGAGTGGAAAAGCTACTTCTGCTGTTTTGGCTAAACTGATGTGCCC  250

seq1  ATCAGATCACCCTCTAACTAACCGTTGATGCCCATAGGTGAGCGCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATCACCCTCTAACTAACCGTTGATGCCCATAGGTGAGCGCTGCTG  300

seq1  TCCCTGTTGGCCAGAGAAGCTTGTCTTTGTGATGGTCACAGATGGCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTGGCCAGAGAAGCTTGTCTTTGTGATGGTCACAGATGGCTATA  350

seq1  GAGATGCTTAACTGTAACTCAGTCAAACGTACTAAGAATAGGTTCCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTTAACTGTAACTCAGTCAAACGTACTAAGAATAGGTTCCTGTT  400

seq1  GAGTGACCAGTCATAGATGGTCTCTCTATCACTTCCTCCACGGTCAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACCAGTCATAGATGGTCTCTCTATCACTTCCTCCACGGTCAGGGA  450

seq1  ACATGGCAGAGGAAGGGGCAGAAAGAATGTGAGAGGAAGAGGAAGGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCAGAGGAAGGGGCAGAAAGAATGTGAGAGGAAGAGGAAGGGAGT  500

seq1  TAAGGTTAGGTACAACTCAGCTTCTTGTCCAAAGAATGGAAGCCATT  547
      |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAGGTTAGGTACAACTCAGCTTCTTGTCCAAAGAATGGAAGGCATT  547

seq1: chr12_84944676_84944865
seq2: B6Ng01-022D17.g_69_258 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACAAAGTTCATGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAAAGTTCATGAGG  50

seq1  CTGCATTCAGCTATACTGTGTGAAATATACAAACTGTGCTAAGAAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCAGCTATACTGTGTGAAATATACAAACTGTGCTAAGAAATGTC  100

seq1  ACTGACTTGGTGAATTTGCCAGATCCCAAGAAACACCTTGCCTTGCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTTGGTGAATTTGCCAGATCCCAAGAAACACCTTGCCTTGCAGGT  150

seq1  TAGGAAATTTGGTTTTCCTACCACCTCCAGAAGTGAATTC  190
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATTTGGTTTTCCTACCACCTCCAGAAGTGAATTC  190