BAC Information

Click to search

BAC

Clone NameB6Ng01-023K12
Chromosome12 (Build37)
Map Location 57,148,015 - 57,148,862
singlet/doubletsinglet
Overlap genenone
Upstream gene2700097O09Rik, LOC665144, EG665137, Srp54, 1700047I17Rik, LOC100039815, LOC665155, LOC100039830, Ppp2r3c, 1110008L16Rik, LOC673593, LOC665366, Psma6, LOC100039871, Nfkbia, Aldoa-ps1, Insm2, Garnl1, Brms1l, LOC100039915
Downstream geneLOC382600, LOC382601, Mbip, EG621837, E030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9, Slc25a21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023K12.bB6Ng01-023K12.g
ACCDH855515DH855516
length8481,107
definitionDH855515|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K12, 5' end.DH855516|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttcttgcggctacctaggggatctcttttcatttttcataca
tgggtatcttttagttagctttccctgctttaaatagcaacatattccca
ctgtaaaacatttaaacaatccagagatgaatgttaagttttaacaatag
gattagattcccacaatcctgttcttcaggaatcctgctcaccatttgat
gcatatttgcttattttatttaacaagcgcttgcacagcaattctatata
ctaagcatttccccagacactttgcaattgtacttgatccagcgctcatg
acctctgtgtgaggaggtgtgattactcctctattcacagggagggagta
ctcaaaaacattcatcagttgcacacagtcacacatttctactggcaatg
ttgagattcaaacacaggccagctgacttcagacaccttgctgttaatca
caccaagaccaagacactctttcagttatctctttatacagcaaggccac
cctctgctacatatgcagctgaagccatgggtccctccatgtgtacgcct
tggttggtggtttagtccctgggagctctggagggggggtctggttggtt
aatattgttgttcttcctatgggttgcaaacctctttggctccttcagtc
ctttctctaactcctccactggggaccccgtgctcagtccattagttggc
tgtgagtatctgtctctgtatttgtcaggctctggcagagcctctcagag
acagctatatcatgctcctatcacaagcacttcttgtcatccacaatagt
gtctgagttggtgtctgtatatgggatggatctcctagattggggcag
gaattctccccactgattcccataagggctgcatcagtttgcagttccac
ccacagtgaatgggagatcctttttctctgcatccatgacagagtttgtt
gctgggggctcagttggtctttgccatactcactgatataagataaaatc
tcacagttcttttaatttgcatttctttaattgctagggataatgaactt
tttaaatatttattgcttatttcttcttcttttgagaattctattcagat
cccagtcccatttttaaatgctccacttgtttggttggttggttactttt
gagttctttatataattctgaatattagtcctctggtaggtgtatgtcgg
gcaaagattctctcccattctggggggtttgtccccacccagttgtttgg
tgtgtgttcgttcgtttgttttgttaactggcccgggaccttttagcttt
aaaaagcctcacttgtcaattcttgatcaatggagtcattttcagaaagc
ccttccctacacctgtgtcatgtagagtgcttcctcggtttttcttctag
cagtttcttcattgttataggtcacatttaggtctttgatccatttggaa
tgaacttttgttcaagatgatagatgcatgtctaacttcattcttctgcc
tctgacatccagttttttccagaaccatttgtcgaagatgctctctttct
tcaagcttatcaagtaataattggttgaagtaacctgtatttatattttg
aatctcctattccactctactgatctgcatgccctatttctgtgccagta
tcatactgtttttattactatgcctctgtaatatatcttaaagatctgga
ataataattcttcatgtttttctctttgcaagggttgttttggctatcca
gaatcttttgtgttttataggatcttaggattttttcttttctgggaaga
agagtgtggaattggatgaatttaatgaatcttaaatatttttggcaagt
gtcatttccagattatttaccatccctgacataaattttcaaaatttctc
ttccatctgtattcaaatttaaagtatatcttgaagaccttcatctgttc
tcggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_57148015_57148862
seq2: B6Ng01-023K12.b_41_888

seq1  GAATTCACTTCTTGCGGCTACCTAGGGGATCTCTTTTCATTTTTCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTGCGGCTACCTAGGGGATCTCTTTTCATTTTTCATACA  50

seq1  TGGGTATCTTTTAGTTAGCTTTCCCTGCTTTAAATAGCAACATATTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATCTTTTAGTTAGCTTTCCCTGCTTTAAATAGCAACATATTCCCA  100

seq1  CTGTAAAACATTTAAACAATCCAGAGATGAATGTTAAGTTTTAACAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAACATTTAAACAATCCAGAGATGAATGTTAAGTTTTAACAATAG  150

seq1  GATTAGATTCCCACAATCCTGTTCTTCAGGAATCCTGCTCACCATTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATTCCCACAATCCTGTTCTTCAGGAATCCTGCTCACCATTTGAT  200

seq1  GCATATTTGCTTATTTTATTTAACAAGCGCTTGCACAGCAATTCTATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTGCTTATTTTATTTAACAAGCGCTTGCACAGCAATTCTATATA  250

seq1  CTAAGCATTTCCCCAGACACTTTGCAATTGTACTTGATCCAGCGCTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATTTCCCCAGACACTTTGCAATTGTACTTGATCCAGCGCTCATG  300

seq1  ACCTCTGTGTGAGGAGGTGTGATTACTCCTCTATTCACAGGGAGGGAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGTGTGAGGAGGTGTGATTACTCCTCTATTCACAGGGAGGGAGTA  350

seq1  CTCAAAAACATTCATCAGTTGCACACAGTCACACATTTCTACTGGCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAACATTCATCAGTTGCACACAGTCACACATTTCTACTGGCAATG  400

seq1  TTGAGATTCAAACACAGGCCAGCTGACTTCAGACACCTTGCTGTTAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTCAAACACAGGCCAGCTGACTTCAGACACCTTGCTGTTAATCA  450

seq1  CACCAAGACCAAGACACTCTTTCAGTTATCTCTTTATACAGCAAGGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGACCAAGACACTCTTTCAGTTATCTCTTTATACAGCAAGGCCAC  500

seq1  CCTCTGCTACATATGCAGCTGAAGCCATGGGTCCCTCCATGTGTACGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTACATATGCAGCTGAAGCCATGGGTCCCTCCATGTGTACGCCT  550

seq1  TGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGGGGGGTCTGGTTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGTGGTTTAGTCCCTGGGAGCTCTGGAGGGGGGGTCTGGTTGGTT  600

seq1  AATATTGTTGTTCTTCCTATGGGTTGCAAACCTCTTTGGCTCCTTCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTGTTCTTCCTATGGGTTGCAAACCTCTTTGGCTCCTTCAGTC  650

seq1  CTTTCTCTAACTCCTCCACTGGGGACCCCGTGCTCAGTCCATTAGTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTAACTCCTCCACTGGGGACCCCGTGCTCAGTCCATTAGTTGGC  700

seq1  TGTGAGTATCTGTCTCTGTATTTGTCAGGCTCTGGCAGAGCCTCTCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTGAGTATCTGTCTCTGTATTTGTCAGGCTCTGGCAGAGCCTCTCA-GA  749

seq1  GACAGCTATATCAGGCTCCTATCAGCAAGCACTTCTTGTCATCCACAATA  800
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  GACAGCTATATCATGCTCCTATCA-CAAGCACTTCTTGTCATCCACAATA  798

seq1  GTGTCTGAGTTGGTGTCTGTATATGGGATGGATC-CCTAGA-TGGGGCAG  848
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  GTGTCTGAGTTGGTGTCTGTATATGGGATGGATCTCCTAGATTGGGGCAG  848