BAC Information

Click to search

BAC

Clone NameB6Ng01-024B01
Chromosome12 (Build37)
Map Location 84,053,768 - 84,054,863
singlet/doubletsinglet
Overlap geneRgs6
Upstream genePcnx, Sipa1l1, LOC432675, EG666911
Downstream geneDpf3, Wdr21, Zfyve1, LOC626950, Rbm25, Psen1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024B01.b
ACCDH855809
length1,087
definitionDH855809|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgttttgtttttagttcataaactttgcaaatcatcttttgt
ctaccttaagctttcctaacaacatcttcttggagctacatcttctgtac
cacactgccataatttaataaatatggattgctggatttttttttttatt
gtattcagttgcacaaacgtcaccacggttccttttggaacattttaaat
tactcagacaggaagccattgcactgttacctgcactcccttttcatttc
ccaaaccacacagtgtacctcctctatgcttgctctctgtaggttggccc
attctgaacttttaacatgggtggggccatataacatgtaggcctttgtg
actggctttttttactaggcatgatgttttaaaagttcgcatgtcgatat
gaacactcatgcacaaggtttttaaaataatggacatccatatttatttc
tctctggtaggagtagagttgctggctcattggggagaggcatgctgaag
aatagtcagattagtttctaaaacgagtatatcaggttatggtcctatag
caaggatgtgaagatcccagtttctctggacacacacacacacacacaca
cacacacacacacacgcacacacacatttatattctttttcatttttcag
atgacattgagcttactgttcatttttatctatcttcttagagaaataac
cactcagccatattacaccttggaatcaatagtaatgtccctacccacat
ctctgaggtcagtggtgtgtcctctctctttttctttaattagaaaaaaa
attcttcaattttattgatctttttaaaaaatatcagctttgggcttaaa
tgatattttcctattagcaatttttccatttcatttattgctctttttta
agccatttctgttttctacatactcagagtctgatttgcccatcagacca
tttaaatcaataagctgaatttttacacaggtagctcactttttgtagcc
agtggtccctggtgcaagaatcacacaaagtgtaaggagcattggatgcc
tggatgtattctggctcctgtggttctatgatttttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_84053768_84054863
seq2: B6Ng01-024B01.b_40_1126

seq1  GAATTCAATGTTTTGTTTTTAGTTCATAAACTTTGCAAATCATCTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTTTGTTTTTAGTTCATAAACTTTGCAAATCATCTTTTGT  50

seq1  CTACCTTAAGCTTTCCTAACAACATCTTCTTGGAGCTACATCTTCTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTAAGCTTTCCTAACAACATCTTCTTGGAGCTACATCTTCTGTAC  100

seq1  CACACTGCCATAATTTAATAAATATGGATTGCTGGATTTTTTTTTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCCATAATTTAATAAATATGGATTGCTGGATTTTTTTTTTTATT  150

seq1  GTATTCAGTTGCACAAACGTCACCACGGTTCCTTTTGGAACATTTTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCAGTTGCACAAACGTCACCACGGTTCCTTTTGGAACATTTTAAAT  200

seq1  TACTCAGACAGGAAGCCATTGCACTGTTACCTGCACTCCCTTTTCATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGACAGGAAGCCATTGCACTGTTACCTGCACTCCCTTTTCATTTC  250

seq1  CCAAACCACACAGTGTACCTCCTCTATGCTTGCTCTCTGTAGGTTGGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCACACAGTGTACCTCCTCTATGCTTGCTCTCTGTAGGTTGGCCC  300

seq1  ATTCTGAACTTTTAACATGGGTGGGGCCATATAACATGTAGGCCTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAACTTTTAACATGGGTGGGGCCATATAACATGTAGGCCTTTGTG  350

seq1  ACTGGCTTTTTTTACTAGGCATGATGTTTTAAAAGTTCGCATGTCGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTTTTTTACTAGGCATGATGTTTTAAAAGTTCGCATGTCGATAT  400

seq1  GAACACTCATGCACAAGGTTTTTAAAATAATGGACATCCATATTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCATGCACAAGGTTTTTAAAATAATGGACATCCATATTTATTTC  450

seq1  TCTCTGGTAGGAGTAGAGTTGCTGGCTCATTGGGGAGAGGCATGCTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTAGGAGTAGAGTTGCTGGCTCATTGGGGAGAGGCATGCTGAAG  500

seq1  AATAGTCAGATTAGTTTCTAAAACGAGTATATCAGGTTATGGTCCTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCAGATTAGTTTCTAAAACGAGTATATCAGGTTATGGTCCTATAG  550

seq1  CAAGGATGTGAAGATCCCAGTTTCTCTGGACACACACACACACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGTGAAGATCCCAGTTTCTCTGGACACACACACACACACACACA  600

seq1  CACACACACACACACGCACACACACATTTATATTCTTTTTCATTTTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACGCACACACACATTTATATTCTTTTTCATTTTTCAG  650

seq1  ATGACATTGAGCTTACTGTTCATTTTTATCTATCTTCTTAGAGAAATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTGAGCTTACTGTTCATTTTTATCTATCTTCTTAGAGAAATAAC  700

seq1  CACTCAGCCATATTACACCTTGGAATCAATAGTAATGTCCCTACCCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGCCATATTACACCTTGGAATCAATAGTAATGTCCCTACCCACAT  750

seq1  CTCTGAGGTCAGTGGTGTGTCCTCTCTCTTTTTCTTTAATTAGAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGTCAGTGGTGTGTCCTCTCTCTTTTTCTTTAATTAGAAAAAAA  800

seq1  ATTCTTCAATTTTATTGATCTTTTTAAAAAATATCAGCTTTGGGCTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAATTTTATTGATCTTTTTAAAAAATATCAGCTTTGGGCTTAAA  850

seq1  TGATATTTTCCTATTAGCAATTTTTCCATTTCATTTATTGCTCTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGATATTTTCCTATTAGCAATTTTTCCATTTCATTTATTGCTC-TTTTTT  899

seq1  AAGCCATTTCTTGTTTTCTACATACTCAGAGTCTGATTTGCCCATCAGAC  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATTTC-TGTTTTCTACATACTCAGAGTCTGATTTGCCCATCAGAC  948

seq1  CATTTAAATCAATAAGCTGAATTTTTAACACAGGTAGCTCACTTTTTGTA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CATTTAAATCAATAAGCTGAATTTTT-ACACAGGTAGCTCACTTTTTGTA  997

seq1  GCCAGTGGTCCCT-GTGCAAGAATCACACAAAGGTGGAAAGAGCATTGGA  1049
      ||||||||||||| |||||||||||||||||| ||| || ||||||||||
seq2  GCCAGTGGTCCCTGGTGCAAGAATCACACAAA-GTGTAAGGAGCATTGGA  1046

seq1  TGCCTGGATTGTATTTCCTGGCTTTCCTGTGTTCTTATTGATTTTTT  1096
      |||||||| ||||||  |||||  ||||||| |  || |||||||||
seq2  TGCCTGGA-TGTATT--CTGGC--TCCTGTGGTTCTA-TGATTTTTT  1087