BAC Information

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BAC

Clone NameB6Ng01-024G17
Chromosome12 (Build37)
Map Location 38,996,971 - 39,150,110
singlet/doubletdoublet
Overlap geneDgkb
Upstream geneA530016O06Rik, LOC100043139
Downstream geneLOC668824, LOC100043142, Etv1, LOC100043145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024G17.bB6Ng01-024G17.g
ACCDH856061DH856062
length992966
definitionDH856061|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G17, 5' end.DH856062|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,149,120 - 39,150,110)(38,996,971 - 38,997,949)
sequence
gaattcatcctatgtagaaatcttccataaatgcacataaagcttaattc
agtgatatcatctctaaaggtcatttggatcttacagttgcaattgctat
gtattcagtgggaaagcagaaagcacaaagagatttcttactaaatatga
aggtaccagtctttcaggaggtccttgtacagttttcatgtgtagattca
gcagatgataatcaaaatttctcttgatcttggacatttgaaagcaccca
gaaacatactgttctacctaatgtacattttttcccagtcaacagatttt
tattaagcttttgatgtatatgatgtaccagatagtctaagacttaaaga
tgcaaaatgctatcttcatgtttacaatctgcctatgacttcacaggcag
atgtatattcatgctttgcaggcacacaccgagcgcttcttaatcacctt
ggctgctactacagtatcaagactaatcagtacactgttcaaactgtata
ttgtttcttatagctttcgaagctgaagcccacagtcaggatggaccaga
gtgccagcatgtttgggttctagtagacagttctttttgtcgccatcact
taacctacagtgacagatctcctcctcattacttaattaccttccaaaga
cctgctttactatcactatggcaacagagatttaggattccatagaatat
tttgacagacacaaactgatccacagctagttgccagtcttgctcagatc
actctaaaaactacctctgaccactacatttagtttttcattgccacaac
aacaacaacacctcataaaattaactgttaaagaggaaaggattatttta
gctcatattgttggaagtgcagttcatgaacaagtaacccagtttgcttt
gagcctgtagcaaggcaacacaatgtaacatgcatgtgagcaaggctgct
tagatcacaagccaaggaacaaatgggaatgagaggggagtc
gaattcattttaggcaacctgtaaatcaccattcccttagggtcagttaa
ataccttgttagcattcctttggaggtttctttttacttttttttttttt
tttgagacagggtttctctgtgtatccctggctgtcctggaactcactct
gtagaccaggctgtcctcgaactcagaaatctgcctgcctctgcctcctg
ggtgctgggattaaaggtgtgcaccaccacgcctggcttctttttatttt
tatgtaaataatctgagtttcttttcttttaaaatggtatttgtactttt
gaagaaatacttctctctatcttcatagaatgtcgttgttaggaaaaagc
ctaccacttagctcagctacaattataagcaagaaggggatcatacatgg
gagggttccctttgctgttatagacaatgggagatcacacttctctgggc
tcagaagttggccagaacagtcgcttgttgctctgtcatttgacaaacta
tcttgtgtcagcatgctggctgataaaaatttctcttgcttctagttcct
ccagatactgttactctgtacattcttccattctctccgtgtctcctgtg
agatagaacagaaataatcatttcacatttctctgaaatgtgaaggtaga
tgagcaaacaaagtctcttcctcgttagggcaaagaggtgcttaggaaag
ccatcccagtgttcactgtgttgtcatggggtgggggtggcaaagttttc
acgctctcattcttttaataaacaaataataaatttctgtttaactggga
gctactcaagatttcttttgcttctcccatgatttccaaatattccattc
tttttctctgctcatttgtaagcagtcccttctcaactgtgtttactgga
aaatgcctgtttcaccactccccacattttctcccagaatttcaagttat
accatccaactaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39149120_39150110
seq2: B6Ng01-024G17.b_34_1025 (reverse)

seq1  GACTCCCCTCCTCATTCCCATTTGTTCCTTGGCTTGTGATCTAAGCAGCC  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCCT-CTCATTCCCATTTGTTCCTTGGCTTGTGATCTAAGCAGCC  49

seq1  TTGCTCACATGCATGTTACATTGTGTTGCCTTGCTACAGGCTCAAAGC-A  99
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGCTCACATGCATGTTACATTGTGTTGCCTTGCTACAGGCTCAAAGCAA  99

seq1  ACTGGGTTACTTGTTCATGAACTGCACTTCCAACAATATGAGCTAAAATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTTACTTGTTCATGAACTGCACTTCCAACAATATGAGCTAAAATA  149

seq1  ATCCTTTCCTCTTTAACAGTTAATTTTATGAGGTGTTGTTGTTGTTGTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCTCTTTAACAGTTAATTTTATGAGGTGTTGTTGTTGTTGTGG  199

seq1  CAATGAAAAACT-AATGTAGTGGTCAGAGGTAGTTTTTAGAGTGATCTGA  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAAACTAAATGTAGTGGTCAGAGGTAGTTTTTAGAGTGATCTGA  249

seq1  GCAAGACTGGCAACTAGCTGTGGATCAGTTTGTGTCTGTCAAAATATTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACTGGCAACTAGCTGTGGATCAGTTTGTGTCTGTCAAAATATTCT  299

seq1  ATGGAATCCTAAATCTCTGTTGCCATAGTGATAGTAAAGCAGGTCTTTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATCCTAAATCTCTGTTGCCATAGTGATAGTAAAGCAGGTCTTTGG  349

seq1  AAGGTAATTAAGTAATGAGGAGGAGATCTGTCACTGTAGGTTAAGTGATG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATTAAGTAATGAGGAGGAGATCTGTCACTGTAGGTTAAGTGATG  399

seq1  GCGACAAAAAGAACTGTCTACTAGAACCCAAACATGCTGGCACTCTGGTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACAAAAAGAACTGTCTACTAGAACCCAAACATGCTGGCACTCTGGTC  449

seq1  CATCCTGACTGTGGGCTTCAGCTTCGAAAGCTATAAGAAACAATATACAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGACTGTGGGCTTCAGCTTCGAAAGCTATAAGAAACAATATACAG  499

seq1  TTTGAACAGTGTACTGATTAGTCTTGATACTGTAGTAGCAGCCAAGGTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACAGTGTACTGATTAGTCTTGATACTGTAGTAGCAGCCAAGGTGA  549

seq1  TTAAGAAGCGCTCGGTGTGTGCCTGCAAAGCATGAATATACATCTGCCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGCGCTCGGTGTGTGCCTGCAAAGCATGAATATACATCTGCCTG  599

seq1  TGAAGTCATAGGCAGATTGTAAACATGAAGATAGCATTTTGCATCTTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCATAGGCAGATTGTAAACATGAAGATAGCATTTTGCATCTTTAA  649

seq1  GTCTTAGACTATCTGGTACATCATATACATCAAAAGCTTAATAAAAATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGACTATCTGGTACATCATATACATCAAAAGCTTAATAAAAATCT  699

seq1  GTTGACTGGGAAAAAATGTACATTAGGTAGAACAGTATGTTTCTGGGTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTGGGAAAAAATGTACATTAGGTAGAACAGTATGTTTCTGGGTGC  749

seq1  TTTCAAATGTCCAAGATCAAGAGAAATTTTGATTATCATCTGCTGAATCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTCCAAGATCAAGAGAAATTTTGATTATCATCTGCTGAATCT  799

seq1  ACACATGAAAACTGTACAAGGACCTCCTGAAAGACTGGTACCTTCATATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGAAAACTGTACAAGGACCTCCTGAAAGACTGGTACCTTCATATT  849

seq1  TAGTAAGAAATCTCTTTGTGCTTTCTGCTTTCCCACTGAATACATAGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGAAATCTCTTTGTGCTTTCTGCTTTCCCACTGAATACATAGCAA  899

seq1  TTGCAACTGTAAGATCCAAATGACCTTTAGAGATGATATCACTGAATTAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACTGTAAGATCCAAATGACCTTTAGAGATGATATCACTGAATTAA  949

seq1  GCTTTATGTGCATTTATGGAAGATTTCTACATAGGATGAATTC  991
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGTGCATTTATGGAAGATTTCTACATAGGATGAATTC  992

seq1: chr12_38996971_38997949
seq2: B6Ng01-024G17.g_65_1030

seq1  GAATTCATTTTAGGCAACCTGTAAATCACCATTCCCTTAGGGTCAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAGGCAACCTGTAAATCACCATTCCCTTAGGGTCAGTTAA  50

seq1  ATACCTTGTTAGCATTCCTTTGGAGGTTTCTTTTTACTTTTTTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGTTAGCATTCCTTTGGAGGTTTCTTTTTACTTTTTTTTTTTTT  100

seq1  TTTGAGACAGGGTTTCTCTGTGTATCCCTGGCTGTCCTGGAACTCACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGGGTTTCTCTGTGTATCCCTGGCTGTCCTGGAACTCACTCT  150

seq1  GTAGACCAGGCTGTCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGTCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCTG  200

seq1  GGTGCTGGGATTAAAGGTGTGCACCACCACGCCTGGCTTCTTTTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGATTAAAGGTGTGCACCACCACGCCTGGCTTCTTTTTATTTT  250

seq1  TATGTAAATAATCTGAGTTTCTTTTCTTTTAAAATGGTATTTGTACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAATAATCTGAGTTTCTTTTCTTTTAAAATGGTATTTGTACTTTT  300

seq1  GAAGAAATACTTCTCTCTATCTTCATAGAATGTCGTTGTTAGGAAAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATACTTCTCTCTATCTTCATAGAATGTCGTTGTTAGGAAAAAGC  350

seq1  CTACCACTTAGCTCAGCTACAATTATAAGCAAGAAGGGGATCATACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACTTAGCTCAGCTACAATTATAAGCAAGAAGGGGATCATACATGG  400

seq1  GAGGGTTCCCTTTGCTGTTATAGACAATGGGAGATCACACTTCTCTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTCCCTTTGCTGTTATAGACAATGGGAGATCACACTTCTCTGGGC  450

seq1  TCAGAAGTTGGCCAGAACAGTCGCTTGTTGCTCTGTCATTTGACAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGTTGGCCAGAACAGTCGCTTGTTGCTCTGTCATTTGACAAACTA  500

seq1  TCTTGTGTCAGCATGCTGGCTGATAAAAATTTCTCTTGCTTCTAGTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTCAGCATGCTGGCTGATAAAAATTTCTCTTGCTTCTAGTTCCT  550

seq1  CCAGATACTGTTACTCTGTACATTCTTCCATTCTCTCCGTGTCTCCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATACTGTTACTCTGTACATTCTTCCATTCTCTCCGTGTCTCCTGTG  600

seq1  AGATAGAACAGAAATAATCATTTCACATTTCTCTGAAATGTGAAGGTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAACAGAAATAATCATTTCACATTTCTCTGAAATGTGAAGGTAGA  650

seq1  TGAGCAAACAAAGTCTCTTCCTCGTTAGGGCAAAGAGGTGCTTAGGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAACAAAGTCTCTTCCTCGTTAGGGCAAAGAGGTGCTTAGGAAAG  700

seq1  CCATCCCAGTGTTCACTGTGTTGTCATGGGGTGGGGGTGGCAAAGGTTTT  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCATCCCAGTGTTCACTGTGTTGTCATGGGGTGGGGGTGGCAAA-GTTTT  749

seq1  CACGCTCTCATTCTTTTAATAAACAAATAATAAAATTTCTGTTTAACTGG  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CACGCTCTCATTCTTTTAATAAACAAATAAT-AAATTTCTGTTTAACTGG  798

seq1  GAGCTACTCAAGATTTCTTTTGCTTCTCCCATGATTTCCAAAATATTTCC  850
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  GAGCTACTCAAGATTTCTTTTGCTTCTCCCATGATTTCC-AAATA-TTCC  846

seq1  ATTCTTTTTTCTCTGCTCATTTGTAAGCAGTCCCTTCTCCAACTGTGTAT  900
      |||| ||||||||||||||||||||||||||||||||| ||||||||| |
seq2  ATTC-TTTTTCTCTGCTCATTTGTAAGCAGTCCCTTCT-CAACTGTGT-T  893

seq1  GACTGGAAAATGCCTGTTTCACCACTCCACACATTTATCTTCCAAGAAAT  950
       ||||||||||||||||||||||||||| ||||||| ||| |||   |||
seq2  TACTGGAAAATGCCTGTTTCACCACTCCCCACATTT-TCTCCCA--GAAT  940

seq1  TTCAAGTTAATAACCATTCAAACTAAAGT  979
      |||||||||   |||| || |||||||||
seq2  TTCAAGTTA--TACCA-TCCAACTAAAGT  966