BAC Information

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BAC

Clone NameB6Ng01-024K15
Chromosome12 (Build37)
Map Location 45,774,522 - 45,775,424
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062, Pnpla8, Nrcam, EG620025
Downstream geneStxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024K15.bB6Ng01-024K15.g
ACCDH856230DH856231
length9161,211
definitionDH856230|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K15, 5' end.DH856231|Mus musculus domesticus DNA, BAC clone: B6Ng01-024K15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgggagtgcattgaaagtgggtacctatctgtctctgtgtt
aattacatgtgtaaaaagtgtactttggtacccacatcttttgttttgtt
ttgttttgtttttcgagacaaggtttctgtgtatagccctggctgtcctg
gaactcctggaatccgcctgcttctgcctcccgagtgccgggattaaagg
cgtgcgccaccatcgcccggcgtggtacccacatcttaacctttcaaaat
agatgggtcatttgggatccactgtatgaacggacgttgagcttgtaaga
aatgtttcccatagaactttctttttttttttttttttttttttttttgt
gacatacctcctccaacaaggccaaaccccttagtccttcctaaacagtt
caccaactgggaaccaaacattcaaatatatgagcctttgggggtcattc
tttctcaaaccactgtactgaattaatgattttttttaaaaaaatatgct
caattttgatgtattacatgggaaatgtcaatcaaagaagacaatctaat
taaaagccctttgaagttgttggtgatgtgtcagaatgtgaggaaatctg
gagatttgagaatgcccttctgacacatagtgcttaaatatggatttata
ttactggtagtaatgaccctcagataactgcataattgagacttagcctc
agaagtttttactaattacccagtagtagcctgcataagggcctattaaa
actctttctgaggaatcactatgagtctatttgctgcaaacataaggcct
ggtttttaaaattatttatttactatatttactttttttttttttttttt
ttgggaaagaaaactctattttttttttttttccccgagctcttgattct
gctgttattgatcaaa
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctgtcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagagacaatgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccagtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacagattaaaga
gcttgccgagtcggtccgtaaatatggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagctgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcaaacaaactaccattggggagcttatgccca
agtttcctccacggctattagggcctggaaggcgctctcccgagcagtga
aaccactggtcaattaacaaaagttgtccagggacctcagagtccttctc
agattttgtggccagaatgacagaggcagcagagcgtatttttggagatt
cagagcaagccgcgcctctggtagaacagctatctatgagcaagccacaa
ggagtgccgagcggccatagccccaagaagacaaaggctacagactggct
cagggtctgtcgagagcttgggggactctcacatgcaggcttagcggccg
catctcaattccagaaccgctccatgagcagaatgatcgaagactgttta
ttgcggaagcctgggcattttagaaagatggcgagcctcgaataacaggg
ggacctctccactctttgcttatgtgcaaggtatcctagacctgaacatg
tcctctgtgaagatataaggcaatccttcaccggtatctatccactgagt
gctaaacggtatacggctgtccagccttaaaatttgaccgtgtcatcgac
cggtaagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_45774522_45775424
seq2: B6Ng01-024K15.b_36_931

seq1  GAATTCTCTTGGGAGTGCATTGAAAGTGGGTACCTATCTGTCTCTGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGGGAGTGCATTGAAAGTGGGTACCTATCTGTCTCTGTGTT  50

seq1  AATTACATGTGTAAAAAGTGTACTTTGGTACCCACATCTTTTGTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATGTGTAAAAAGTGTACTTTGGTACCCACATCTTTTGTTTTGTT  100

seq1  TTGTTTTGTTTTTCGAGACAAGGTTTCTGTGTATAGCCCTGGCTGTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTTTCGAGACAAGGTTTCTGTGTATAGCCCTGGCTGTCCTG  150

seq1  GAACTCCTGGAATCCGCCTGCTTCTGCCTCCCGAGTGCCGGGATTAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCTGGAATCCGCCTGCTTCTGCCTCCCGAGTGCCGGGATTAAAGG  200

seq1  CGTGCGCCACCATCGCCCGGCGTGGTACCCACATCTTAACCTTTCAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCGCCACCATCGCCCGGCGTGGTACCCACATCTTAACCTTTCAAAAT  250

seq1  AGATGGGTCATTTGGGATCCACTGTATGAACGGACGTTGAGCTTGTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGTCATTTGGGATCCACTGTATGAACGGACGTTGAGCTTGTAAGA  300

seq1  AATGTTTCCCATAGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCCCATAGAACTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGT  350

seq1  GACATACCTCCTCCAACAAGGCCAAACCTCTTAGTCCTTCCTAAACAGTT  400
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GACATACCTCCTCCAACAAGGCCAAACCCCTTAGTCCTTCCTAAACAGTT  400

seq1  CACCAACTGGGAACCAAACATTCAAATATATGAGCCTTTGGGGTTCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACCAACTGGGAACCAAACATTCAAATATATGAGCCTTTGGGGGTCATTC  450

seq1  TTTCTCAAACCACTGTACTGAATTAATGATTTTTTTTAAAAAAATATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAACCACTGTACTGAATTAATGATTTTTTTTAAAAAAATATGCT  500

seq1  CAATTTTGATGTATTACATGGTAAATGTCAATCAAAGAAGACAATCTAAT  550
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAATTTTGATGTATTACATGGGAAATGTCAATCAAAGAAGACAATCTAAT  550

seq1  TAAAAGCCCTTTGAAGTTGTTGGTGATGTGTCAGAGTGTGAGGAAATCTG  600
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAAAAGCCCTTTGAAGTTGTTGGTGATGTGTCAGAATGTGAGGAAATCTG  600

seq1  GAGATTTGAGAATGCCCTTCTGACACATAGTGCTTAAATATGGATTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGAGAATGCCCTTCTGACACATAGTGCTTAAATATGGATTTATA  650

seq1  TTACTGTTAGTAATGACCCTCAGATAACTGCATAATTGAGACTTAGCCTC  700
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTAGTAATGACCCTCAGATAACTGCATAATTGAGACTTAGCCTC  700

seq1  AGAAGTTTTTACTAATTACCCAGTAGTAGCCTGCATAAGGGCCTATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTTACTAATTACCCAGTAGTAGCCTGCATAAGGGCCTATTAAA  750

seq1  ACTCTTTCTGAGGAAATCACTATGAGTCTA-TTGCTGCAAACATAGGCCT  799
      ||||||||||||| |||||||||||||||| |||||||||||||| | | 
seq2  ACTCTTTCTGAGG-AATCACTATGAGTCTATTTGCTGCAAACATAAGGCC  799

seq1  TGTTTTTTAATATTTATTTATTTACTTATATTTTACTTTTTTTTTTTTTT  849
      || ||||||| | |||||||||||| |||| |||||   |||||||||||
seq2  TGGTTTTTAA-AATTATTTATTTAC-TATA-TTTAC---TTTTTTTTTTT  843

seq1  TTTTTTTTTTGGTAATGAAACTTTATTTTTTTTTTTTTTCCCCTGAGCTC  899
      ||||||||| || ||  ||||| |||||||||||||||||||| ||||||
seq2  TTTTTTTTTGGGAAAGAAAACTCTATTTTTTTTTTTTTTCCCC-GAGCTC  892

seq1  TTGA  903
      ||||
seq2  TTGA  896