BAC Information

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BAC

Clone NameB6Ng01-027D01
Chromosome12 (Build37)
Map Location 26,292,922 - 26,415,828
singlet/doubletdoublet
Overlap geneLOC100042974
Upstream geneGrhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973
Downstream geneLOC668726, Rnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027D01.bB6Ng01-027D01.g
ACCDH858006DH858007
length886416
definitionDH858006|Mus musculus domesticus DNA, BAC clone: B6Ng01-027D01, 5' end.DH858007|Mus musculus domesticus DNA, BAC clone: B6Ng01-027D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,414,944 - 26,415,828)(26,292,922 - 26,293,343)
sequence
gaattccctctttgatccagacgttatataattggccatttccatatttt
ataatttctaatgatggagacattgctttgctcttttgtcatcgctattg
taacttgctcacatctgaattattcttgtctacttatcgcttggctgaca
aggatattgttttaattttcaagtgtaatgtctgagtgacttctttgtgg
ctgtttttgatgtctaccattctagccagacttccctgtgttggctttcc
gggggtgcacataaaatcaccacaaacttagcaaattaaaacaagagcca
ccaatcatctcatagtgggtcagaggcctggggtccaattcaatcaagtc
ctcttcttggacctgcaagactgagtctggagtccctgagtgctatgtga
ggcccactgtgctcaccaagtctactgggtgctaaaagaacaagtcaccc
acagtaactggtatattaaggcagcaaacaaactccaggaagcacccacc
ccctttacctctgttgattaactaagaaaactgattcaagaactttaacc
attccttccaaactccttcctctttgctatacatgtgatctaggtcagga
ctgacaagtcatcctagtttgaaacccaaacaccctccagcctagcgctt
cactgattttacccattccattgcaagaggtctttttcttttcacccgtg
ctttgaagcacatttaatctataaaggtaccttctaaaggtaccggtgcc
atacttctccatgaactcttattaagagaccagagactgcttctccagcc
taggctgacatcatctttccacaggtttcctgatcaccgccagacttaat
ctttctcacatgtgcttcatggacaagaatgtttca
acagttgaggtgacggggtgggtggggagatcttgaactgtgtgtttttg
tcaaggttacatttctgctactgatcccagcccagctctcctctacctac
gctaacttctgacttccttttcctttcttctttctttttccttcccttcc
ttttatgttgtcatgtttccatgtgtgcatttgtaaagtagtgggtttca
tgatggcgttttcatacatgtgtgcctttatgcttagttttcactgattc
cccttccctaacgcctttccacgtgtccctgccactctgtatctgagtcc
cttccttctcccaattaaattcttttttttctgatcacttctttcttgtt
agcatctcccttaaaggtctttcccactctctctctctctctctctctct
ctctctctctctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26414944_26415828
seq2: B6Ng01-027D01.b_41_926 (reverse)

seq1  TGAAACATTCTTGTCCATGAAGCACATGTGAGAAAGATTAAGTCTGGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATTCTTGTCCATGAAGCACATGTGAGAAAGATTAAGTCTGGCGG  50

seq1  TGATCAGGAAACCTGTGGGAAGATGATGTCAGCCTAGGCTGGAGAAGCAG  100
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGATCAGGAAACCTGTGGAAAGATGATGTCAGCCTAGGCTGGAGAAGCAG  100

seq1  TCTCTGGTCTCTTAATAAGAGTTCATGGAGAAGTATGGCACCGGTACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTCTCTTAATAAGAGTTCATGGAGAAGTATGGCACCGGTACCTT  150

seq1  TAGAAGGTACCTTTATAGATTAAATGTGCTTCAAAGCACGGGTGAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGTACCTTTATAGATTAAATGTGCTTCAAAGCACGGGTGAAAAGA  200

seq1  AAAAGACCTCTTGCAATGGAATGGGTAAAATCAGTGAAGCGCTAGGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACCTCTTGCAATGGAATGGGTAAAATCAGTGAAGCGCTAGGCTGG  250

seq1  AGGGTGTTTGGGTTTCAAACTAGGATGACTTGTCAGTCCTGACCTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTTTGGGTTTCAAACTAGGATGACTTGTCAGTCCTGACCTAGATC  300

seq1  ACATGTATAGCAAAGAGGAAGGAGTTTGGAAGGAATGGTTAAAGTTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATAGCAAAGAGGAAGGAGTTTGGAAGGAATGGTTAAAGTTCTTG  350

seq1  AATCAGTTTTCTTAGTTAATCAACAGAGGTAAAGGGGGTGGGTGCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTTTCTTAGTTAATCAACAGAGGTAAAGGGGGTGGGTGCTTCCT  400

seq1  GGAGTTTGTTTGCTGCCTTAATATACCAGTTACTGTGGGTGACTTGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGTTTGCTGCCTTAATATACCAGTTACTGTGGGTGACTTGTTCT  450

seq1  TTTAGCACCCAGTAGACTTGGTGAGCACAGTGGGCCTCACATAGCACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCACCCAGTAGACTTGGTGAGCACAGTGGGCCTCACATAGCACTCA  500

seq1  GGGACTCCAGACTCAGTCTTGCAGGTCCAAGAAGAGGACTTGATTGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCCAGACTCAGTCTTGCAGGTCCAAGAAGAGGACTTGATTGAATT  550

seq1  GGACCCCAGGCCTCTGACCCACTATGAGATGATTGGTGGCTCTTGTTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAGGCCTCTGACCCACTATGAGATGATTGGTGGCTCTTGTTTTA  600

seq1  ATTTGCTAAGTTTGTGGTGATTTTATGTGCACCCCCGGAAAGCCAACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTAAGTTTGTGGTGATTTTATGTGCACCCCCGGAAAGCCAACACA  650

seq1  GGGAAGTCTGGCTAGAATGGTAGACATCAAAAACAGCCACAAAGAAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTCTGGCTAGAATGGTAGACATCAAAAACAGCCACAAAGAAGTCA  700

seq1  CTCAGACATTACACTTGAAAATTAAAACAATATCCTTGTCAGCCAAGCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACATTACACTTGAAAATTAAAACAATATCCTTGTCAGCCAAGCGA  750

seq1  TAAGTAGACAAGAATAATTCAGATGTGAGCAAGTTACAATAGCGATGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGACAAGAATAATTCAGATGTGAGCAAGTTACAATAGCGATGACA  800

seq1  AAAGAGCAAAGCAATGTCTCCATCATTAGAAATTATAAAATATGGAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAAAGCAATGTCTCCATCATTAGAAATTATAAAATATGGAAATG  850

seq1  GCC-CTTATATAACGTCTGGATCAAAGAGGGAATTC  885
      |||  |||||||||||||||||||||||||||||||
seq2  GCCAATTATATAACGTCTGGATCAAAGAGGGAATTC  886

seq1: chr12_26292922_26293343
seq2: B6Ng01-027D01.g_67_488

seq1  GAATTCACAGTTGAGGTGACGGGGTGGGTGGGGAGATCTTGAACTGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTTGAGGTGACGGGGTGGGTGGGGAGATCTTGAACTGTGTG  50

seq1  TTTTTGTCAAGGTTACATTTCTGCTACTGATCCCAGCCCAGCTCTCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCAAGGTTACATTTCTGCTACTGATCCCAGCCCAGCTCTCCTCT  100

seq1  ACCTACGCTAACTTCTGACTTCCTTTTCCTTTCTTCTTTCTTTTTCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACGCTAACTTCTGACTTCCTTTTCCTTTCTTCTTTCTTTTTCCTTC  150

seq1  CCTTCCTTTTATGTTGTCATGTTTCCATGTGTGCATTTGTAAAGTAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTTTATGTTGTCATGTTTCCATGTGTGCATTTGTAAAGTAGTGG  200

seq1  GTTTCATGATGGCGTTTTCATACATGTGTGCCTTTATGCTTAGTTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGATGGCGTTTTCATACATGTGTGCCTTTATGCTTAGTTTTCAC  250

seq1  TGATTCCCCTTCCCTAACGCCTTTCCACGTGTCCCTGCCACTCTGTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCCTTCCCTAACGCCTTTCCACGTGTCCCTGCCACTCTGTATCT  300

seq1  GAGTCCCTTCCTTCTCCCAATTAAATTCTTTTTTTTCTGATCACTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCTTCCTTCTCCCAATTAAATTCTTTTTTTTCTGATCACTTCTTT  350

seq1  CTTGTTAGCATCTCCCTTAAAGGTCTTTCCCACTCTCTCTCTCTCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAGCATCTCCCTTAAAGGTCTTTCCCACTCTCTCTCTCTCTCTCT  400

seq1  CTCTCTCTCTCTCTCTCTCTCT  422
      |||||||||||||||||||| |
seq2  CTCTCTCTCTCTCTCTCTCTTT  422