BAC Information

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BAC

Clone NameB6Ng01-030D02
Chromosome12 (Build37)
Map Location 23,290,848 - 23,291,620
singlet/doubletsinglet
Overlap geneEG668669
Upstream geneEG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664, 2410018L13Rik, LOC77114
Downstream geneEG668670, LOC668680, LOC100042895, LOC100043435, EG628081, LOC100042903, LOC100043440, EG668518, LOC100043445, LOC668697
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030D02.bB6Ng01-030D02.g
ACCDH860172DH860173
length1,163776
definitionDH860172|Mus musculus domesticus DNA, BAC clone: B6Ng01-030D02, 5' end.DH860173|Mus musculus domesticus DNA, BAC clone: B6Ng01-030D02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaaaaactgagaaacacctgaaaaatgt
tcaacatcctttaccatcagagaaatgcaaatcaaaacaaccctgagatt
ccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaagcactctggaaatcagtctcgcggttcctcag
aaaattggacatagtacaaccagaggatcccgcaatacctctcctgggca
tatatccagaagatgtcccaaccggtaagaaggatacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttctgaaattcctaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtggatattagcccagacact
tagtatagcgatatataaggtacaagatgcaaaacacatgaaactgaaga
agaacgaagaccaaagtgtggacactttgctccttcttagaattggaaac
tatcacccatggaaggagttacagagacaaagtttggagctgcaacaaaa
ggatggaccatctagagactgccatatccagggatccatcccataattag
cctccaaacgatgacaccattgcatacactagcaagccttttttgcaagg
accgtgatatagctttcccttgtgagactaggccagggcttagcaaacac
agaagtggatgctcacagtcaactatttggatggatcacagggccccaat
ggaggagctagagaaagtatccaagagctaagagatctgcaaccctattg
ttggaacaacattatgactaccagtacccagaagctcttgactctagctg
catatgtatcaaagatgtctagttgccatcactggaaagagagcccattg
gtcagcatctttatgcctggtacgggggaatgccatgccaaaatggattg
gtgtggaagggat
gaattccagaggttgtgtcccctgacctacattcactggatcacttgccc
atcacacaaaccaatccatatgcataaaccttaagcaacaaggtaaaagt
gcgatgtaaaaggagaaaaagaggaagctggcaagctgcttgtaaagccc
caccctacactgacagacctctctccctctgctctttcccaagcactaga
ggccccacaagagttggggaaccagggaaggtggagaaaagaaaaggaaa
tccccaagtactttttctaaataaaaactgctactataacaggatgggag
ccatgtgggtgactctcctcactaagctaggctcatctaggtcacaccca
ctccagtcacccaggaagctcctactcacaccctgcagcctgttcagaca
caaacatcccatcactccttgggggaggatttctcatactccatgttcac
tctccccaacatcctgaatggcatttctgaccttctgttaagacttacac
ttttgggacatcgttactgtgcttttcccctctttggaccctggtaagtc
tgtttcagccccagggtctctgcacctgcagatcctccacctctctgccc
ttcttgctgtctgtttcagagagggtcagtccttgagtatatgtgctttt
ctcttggaagaggcctctaggattatcatcaatttctcatctacctttca
gactctggttctgctttgttcagagcacttcctcagatcagacactgaac
tcttctcttctcttctcttctcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_23290848_23291620
seq2: B6Ng01-030D02.g_67_842 (reverse)

seq1  AGAAGAGAAGAGAAGAGAAGAGAAGAGTTCAGTGTCTGATCTGAGGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAGAGAAGAGAAGAGAAGAGTTCAGTGTCTGATCTGAGGAAGT  50

seq1  GCTCTGAACAAAGCAGAACCAGAGTCTG-AAGGTAGATGAG-AATTGATG  98
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  GCTCTGAACAAAGCAGAACCAGAGTCTGAAAGGTAGATGAGAAATTGATG  100

seq1  ATAATCCTAGAGGCCTCTTCCAAGAG-AAAGCACATATACTCAAGGACTG  147
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATAATCCTAGAGGCCTCTTCCAAGAGAAAAGCACATATACTCAAGGACTG  150

seq1  ACCCTCTCTGAAACAGACAGCAAGAAGGGCAGAGAGGTGGAGGATCTGCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTCTGAAACAGACAGCAAGAAGGGCAGAGAGGTGGAGGATCTGCA  200

seq1  GGTGCAGAGACCCTGGGGCTGAAACAGACTTACCAGGGTCCAAAGAGGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGAGACCCTGGGGCTGAAACAGACTTACCAGGGTCCAAAGAGGGG  250

seq1  AAAAGCACAGTAACGATGTCCCAAAAGTGTAAGTCTTAACAGAAGGTCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCACAGTAACGATGTCCCAAAAGTGTAAGTCTTAACAGAAGGTCAG  300

seq1  AAATGCCATTCAGGATGTTGGGGAGAGTGAACATGGAGTATGAGAAATCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCATTCAGGATGTTGGGGAGAGTGAACATGGAGTATGAGAAATCC  350

seq1  TCCCCCAAGGAGTGATGGGATGTTTGTGTCTGAACAGGCTGCAGGGTGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAAGGAGTGATGGGATGTTTGTGTCTGAACAGGCTGCAGGGTGTG  400

seq1  AGTAGGAGCTTCCTGGGTGACTGGAGTGGGTGTGACCTAGATGAGCCTAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAGCTTCCTGGGTGACTGGAGTGGGTGTGACCTAGATGAGCCTAG  450

seq1  CTTAGTGAGGAGAGTCACCCACATGGCTCCCATCCTGTTATAGTAGCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGAGGAGAGTCACCCACATGGCTCCCATCCTGTTATAGTAGCAGT  500

seq1  TTTTATTTAGAAAAAGTACTTGGGGATTTCCTTTTCTTTTCTCCACCTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAGAAAAAGTACTTGGGGATTTCCTTTTCTTTTCTCCACCTTC  550

seq1  CCTGGTTCCCCAACTCTTGTGGGGCCTCTAGTGCTTGGGAAAGAGCAGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTCCCCAACTCTTGTGGGGCCTCTAGTGCTTGGGAAAGAGCAGAG  600

seq1  GGAGAGAGGTCTGTCAGTGTAGGGTGGGGCTTTACAAGCAGCTTGCCAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGGTCTGTCAGTGTAGGGTGGGGCTTTACAAGCAGCTTGCCAGC  650

seq1  TTCCTCTTTTTCTCCTTTTACATCGCACTTTTACCTTGTTGCTTAAGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTTTCTCCTTTTACATCGCACTTTTACCTTGTTGCTTAAGGTT  700

seq1  TATGCATATGGATTGGTTTGTGTGATGGGCAAGTGATCCAGTGAATGTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATATGGATTGGTTTGTGTGATGGGCAAGTGATCCAGTGAATGTAG  750

seq1  GTCAGGGGACACAACCTCTGGAATTC  773
      ||||||||||||||||||||||||||
seq2  GTCAGGGGACACAACCTCTGGAATTC  776