BAC Information

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BAC

Clone NameB6Ng01-030D15
Chromosome12 (Build37)
Map Location 93,785,040 - 93,935,370
singlet/doubletdoublet
Overlap genenone
Upstream geneGtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030D15.bB6Ng01-030D15.g
ACCDH860196DH860197
length1,079488
definitionDH860196|Mus musculus domesticus DNA, BAC clone: B6Ng01-030D15, 5' end.DH860197|Mus musculus domesticus DNA, BAC clone: B6Ng01-030D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,934,287 - 93,935,370)(93,785,040 - 93,785,533)
sequence
gaattctttaaatataagttagttccctagcacaaaaccatggaattttg
cttgtttgtttttttttttttttttttttttttggttgctttggtttggt
ttattttgttcaagtcttttctgtctgagttaaaggaagtctgtattatt
gcttaaacctacaggacctttcctcctcctgcagtgatgcttcggaattg
ggtaaagggaaggatttaactcctaattttcctggattgtatctcctagt
ataggatctctctgtccataaaatcagtgaacagcactgcagaataacca
ggtcagtatcctctgcttgccatcctgaaatagggttgagtgaggaagat
ggaaactgacttctctactgtacctgttgggcacaagtttctacattatg
agccagcagatgggatgggattttatgcatttctcactagaaatatctct
aaaccaaaacctggcaaggagggaggtaaagcatccaaatacaaatcaat
atgatgtcttggtattatctataaagcagatctgtaattagtagaataat
catagctgaaagttcagagacgcacgtagttcttactaatgccttgttga
ttgaatgtctcccttggctggatccaggggttgcactttcggggaatgat
gttgtaagaaaaaacgtattccactatttacatgattggttgttaaggaa
agagcttgttgaacttctggcctctctctttcagaattcatctgaaaaat
tgttattaatacaatacctgttctcagatcccaattagaagggtcacatg
ctgggcatttgaattatgcaactctgaaaataggttttaaaacagtgttt
aaaagtagatcaatataaaattgtagttccaatataatgctatgtacggg
tatgtcttttagcataatctctcttaaacatttatattaggttgattggg
tatgaaagatagaaactatggtatgttacttataggtagcacttactggt
aagcattatttttagaccattagtaaatataaatcttactggaaaaactt
ggagactaatgtaaaaatcaaagaaattt
caaggacttctaagtgagtgaaaggcatgaaatacatattctgagaatat
tttccgtctggactatcaataggactgttacgttgatgttggcagtggtt
ctctctctctctctctctctctctctctctctgtgcatgtgtgtgtgtgt
gtgacagagagagagagagagagagagagagagagagagagagagagaga
aagagagaaagagagaaggagagaaagagagagagagagagaaactgtga
ttccattcttttggttttgctgtgagataattaaaattgtggggtttttt
gggtgtagttaccctcctcaagttggagttttccttctagtatcttcttt
aagactggattagtagaaagataatctttaaatttggttttgtcatggaa
tatcttgtttgtttatatatagtgattaatagtttcactggctatagtag
tctgggctgatatctatggtctcttaggcaacacatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93934287_93935370
seq2: B6Ng01-030D15.b_41_1119 (reverse)

seq1  AAATTTCTCTTTGATCTTTTTTCATTAGTCTTCAAGTTTTTTCAAGTAAG  50
      |||||  |||||||  ||||| ||||||||| |||| |||||| ||||||
seq2  AAATT--TCTTTGA--TTTTTACATTAGTCTCCAAG-TTTTTCCAGTAAG  45

seq1  ATTTATATTTTATTAATTGTTTTAAAAATAATGCTTAACAGTAAGTGCTA  100
      ||||||| |||| ||| || | ||||||||||||||| ||||||||||||
seq2  ATTTATA-TTTACTAA-TGGTCTAAAAATAATGCTTACCAGTAAGTGCTA  93

seq1  ACTATAAGTAACATTACATAGTTTCTTATCTTTCATTACATATCTAACCT  150
       |||||||||||||  ||||||||| ||||||||||  |  ||| |||||
seq2  CCTATAAGTAACATACCATAGTTTC-TATCTTTCATACCCAATC-AACCT  141

seq1  AATATAAATGTTTTAGAGAGA-TATGCT-AAAGA-ATAACCGTACATAGC  197
      ||||||||||||| ||||||| |||||| ||||| ||| |||||||||||
seq2  AATATAAATGTTTAAGAGAGATTATGCTAAAAGACATACCCGTACATAGC  191

seq1  A-TATATTAGAACTACATTTTTATATTGATTCACTATTTAACACTGTTTT  246
      | |||||| |||||||| ||||||||||||  ||| || |||||||||||
seq2  ATTATATTGGAACTACAATTTTATATTGATCTACTTTTAAACACTGTTTT  241

seq1  AAAAACCTATTTTCAGAGTTGCATATTTCAAATG-CCAGCATGTGAACCT  295
       |||||||||||||||||||||||| |||||||| ||||||||||| |||
seq2  -AAAACCTATTTTCAGAGTTGCATAATTCAAATGCCCAGCATGTGACCCT  290

seq1  CATAATTGGGATCTGAGAACAGGTATTGTATTAATAACAATTTTTCAGAT  345
        ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTAATTGGGATCTGAGAACAGGTATTGTATTAATAACAATTTTTCAGA-  339

seq1  TGAATTCTGAAAGAGAGAGGCCAG-AGTTCAACAAGCTCTTTCCTTAACA  394
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAATTCTGAAAGAGAGAGGCCAGAAGTTCAACAAGCTCTTTCCTTAACA  389

seq1  ACCAATCATGTAAATAGTGGAATACGTTTTTTCTTACAACATCATTCCCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCATGTAAATAGTGGAATACGTTTTTTCTTACAACATCATTCCCC  439

seq1  GAAAGTGCAACCCCTGGATCCAGCCAAGGGAGACATTCAATCAACAAAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAAGTGCAACCCCTGGATCCAGCCAAGGGAGACATTCAATCAACAAGGC  489

seq1  ATTAGTAAGAACTACGTGCGTCTCTGAACTTTCAGCTATGATTATTCTAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAAGAACTACGTGCGTCTCTGAACTTTCAGCTATGATTATTCTAC  539

seq1  TAATTACAGATCTGCTTTATAGATAATACCAAGACATCATATTGATTTGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGATCTGCTTTATAGATAATACCAAGACATCATATTGATTTGT  589

seq1  ATTTGGATGCTTTACCTCCCTCCTTGCCAGGTTTTGGTTTAGAGATATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGATGCTTTACCTCCCTCCTTGCCAGGTTTTGGTTTAGAGATATTT  639

seq1  CTAGTGAGAAATGCATAAAATCCCATCCCATCTGCTGGCTCATAATGTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAGAAATGCATAAAATCCCATCCCATCTGCTGGCTCATAATGTAG  689

seq1  AAACTTGTGCCCAACAGGTACAGTAGAGAAGTCAGTTTCCATCTTCCTCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTGCCCAACAGGTACAGTAGAGAAGTCAGTTTCCATCTTCCTCA  739

seq1  CTCAACCCTATTTCAGGATGGCAAGCAGAGGATACTGACCTGGTTATTCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCCTATTTCAGGATGGCAAGCAGAGGATACTGACCTGGTTATTCT  789

seq1  GCAGTGCTGTTCACTGATTTTATGGACAGAGAGATCCTATACTAGGAGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCTGTTCACTGATTTTATGGACAGAGAGATCCTATACTAGGAGAT  839

seq1  ACAATCCAGGAAAATTAGGAGTTAAATCCTTCCCTTTACCCAATTCCGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCAGGAAAATTAGGAGTTAAATCCTTCCCTTTACCCAATTCCGAA  889

seq1  GCATCACTGCAGGAGGAGGAAAGGTCCTGTAGGTCTAAGCAATAATACAG  944
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCATCACTGCAGGAGGAGGAAAGGTCCTGTAGGTTTAAGCAATAATACAG  939

seq1  ACTTCCTTTAACTCAGACAGAAAAGACTTGAACAAAATAAACCAAACCAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTTAACTCAGACAGAAAAGACTTGAACAAAATAAACCAAACCAA  989

seq1  AGCAACCAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAGCAAAATTCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAGCAAAATTCCA  1039

seq1  TGGTTTTGTGCTAGGGAACTAACTTATATTTAAAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGTGCTAGGGAACTAACTTATATTTAAAGAATTC  1079

seq1: chr12_93785040_93785533
seq2: B6Ng01-030D15.g_70_563

seq1  GAATTCCAAGGACTTCTAAGTGAGTGAAAGGCATGAAATACATATTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGACTTCTAAGTGAGTGAAAGGCATGAAATACATATTCTGA  50

seq1  GAATATTTTCCGTCTGGACTATCAATAGGACTGTTACGTTGATGTTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTCCGTCTGGACTATCAATAGGACTGTTACGTTGATGTTGGCA  100

seq1  GTGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCATGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCATGTGTGT  150

seq1  GTGTGTGTGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  200

seq1  GAGAGAAAGAGAGAAAGAGAGAAGGAGAGAAAGAGAGAGAGAGAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGAGAGAAAGAGAGAAGGAGAGAAAGAGAGAGAGAGAGAGAAA  250

seq1  CTGTGATTCCATTCTTTTGGTTTTGCTGTGAGATAATTAAAATTGTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTCCATTCTTTTGGTTTTGCTGTGAGATAATTAAAATTGTGGGG  300

seq1  TTTTTTGGGTGTAGTTACCCTCCTCAAGTTGGAGTTTTCCTTCTAGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGGTGTAGTTACCCTCCTCAAGTTGGAGTTTTCCTTCTAGTATC  350

seq1  TTCTTTAAGACTGGATTAGTAGAAAGATAATCTTTAAATTTGGTTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAGACTGGATTAGTAGAAAGATAATCTTTAAATTTGGTTTTGTC  400

seq1  ATGGAATATCTTGTTTGTTTATATATAGTGATTAATAGTTTCACTGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATATCTTGTTTGTTTATATATAGTGATTAATAGTTTCACTGGCTA  450

seq1  TAGTAGTCTGGGCTGATATCTATGGTCTCTTAGGCAACACATCT  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTCTGGGCTGATATCTATGGTCTCTTAGGCAACACATCT  494